EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000001266 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 1521 bases
Position: chrscaffold_110209:125434-126954
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000001189	APOBEC_N	PF08210.11	1.5e-41	1	1
ENSTTRP00000001189	APOBEC_C	PF05240.14	6.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000001266	-	534	-	ENSTTRP00000001189	178 (aa)	-	UPI00018B5B7D

Gene Model

Click here to download ENSTTRG00000001266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000001266's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000001266	-	96	41.209	ENSTTRG00000009395	-	90	41.209
ENSTTRG00000001266	-	98	39.444	ENSTTRG00000000703	AICDA	97	39.444
ENSTTRG00000001266	-	98	31.492	ENSTTRG00000013392	APOBEC2	79	31.492

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000001266	-	100	51.099	ENSG00000100298	APOBEC3H	100	51.099	Homo_sapiens
ENSTTRG00000001266	-	100	56.044	ENSAMEG00000010818	-	79	56.044	Ailuropoda_melanoleuca
ENSTTRG00000001266	-	100	49.462	ENSANAG00000025410	APOBEC3H	83	49.462	Aotus_nancymaae
ENSTTRG00000001266	-	100	74.157	ENSBTAG00000007755	APOBEC3H	88	74.157	Bos_taurus
ENSTTRG00000001266	-	99	50.556	ENSCJAG00000012524	APOBEC3H	90	50.556	Callithrix_jacchus
ENSTTRG00000001266	-	99	58.192	ENSCAFG00000001361	APOBEC3Z3	92	58.192	Canis_familiaris
ENSTTRG00000001266	-	99	58.523	ENSCAFG00020002584	-	92	58.192	Canis_lupus_dingo
ENSTTRG00000001266	-	100	77.528	ENSCHIG00000026580	-	91	77.528	Capra_hircus
ENSTTRG00000001266	-	98	53.448	ENSTSYG00000032894	-	100	53.448	Carlito_syrichta
ENSTTRG00000001266	-	99	54.857	ENSCPOG00000009257	-	85	54.857	Cavia_porcellus
ENSTTRG00000001266	-	99	49.727	ENSCCAG00000008525	APOBEC3H	89	51.079	Cebus_capucinus
ENSTTRG00000001266	-	99	51.111	ENSCATG00000030302	APOBEC3H	99	51.111	Cercocebus_atys
ENSTTRG00000001266	-	98	53.714	ENSCLAG00000016615	-	87	53.714	Chinchilla_lanigera
ENSTTRG00000001266	-	99	52.222	ENSCSAG00000006371	APOBEC3H	85	52.222	Chlorocebus_sabaeus
ENSTTRG00000001266	-	99	49.444	ENSCGRG00001022976	Apobec3	78	49.444	Cricetulus_griseus_chok1gshd
ENSTTRG00000001266	-	99	49.444	ENSCGRG00000005621	Apobec3	78	49.444	Cricetulus_griseus_crigri
ENSTTRG00000001266	-	100	51.381	ENSDORG00000027271	-	100	42.857	Dipodomys_ordii
ENSTTRG00000001266	-	99	60.795	ENSECAG00000007726	APOBEC3H	76	60.795	Equus_caballus
ENSTTRG00000001266	-	100	58.989	ENSFCAG00000005251	APOBEC3Z3	92	58.989	Felis_catus
ENSTTRG00000001266	-	100	53.333	ENSSTOG00000007125	-	86	53.333	Ictidomys_tridecemlineatus
ENSTTRG00000001266	-	99	50.000	ENSJJAG00000016840	-	79	50.000	Jaculus_jaculus
ENSTTRG00000001266	-	99	52.841	ENSLAFG00000027404	-	95	52.841	Loxodonta_africana
ENSTTRG00000001266	-	100	52.198	ENSMFAG00000031827	APOBEC3H	88	55.147	Macaca_fascicularis
ENSTTRG00000001266	-	100	52.198	ENSMMUG00000001016	APOBEC3H	88	55.147	Macaca_mulatta
ENSTTRG00000001266	-	100	52.198	ENSMNEG00000039259	APOBEC3H	88	55.147	Macaca_nemestrina
ENSTTRG00000001266	-	99	51.111	ENSMLEG00000033417	APOBEC3H	88	53.676	Mandrillus_leucophaeus
ENSTTRG00000001266	-	99	49.171	ENSMAUG00000011683	Apobec3	80	49.171	Mesocricetus_auratus
ENSTTRG00000001266	-	86	50.667	ENSMOCG00000021576	Apobec3	82	49.143	Microtus_ochrogaster
ENSTTRG00000001266	-	99	44.970	MGP_CAROLIEiJ_G0020029	Apobec3	98	43.373	Mus_caroli
ENSTTRG00000001266	-	99	46.988	ENSMUSG00000009585	Apobec3	97	48.980	Mus_musculus
ENSTTRG00000001266	-	100	46.154	MGP_PahariEiJ_G0020031	-	86	46.154	Mus_pahari
ENSTTRG00000001266	-	99	46.369	MGP_SPRETEiJ_G0020927	Apobec3	98	43.373	Mus_spretus
ENSTTRG00000001266	-	100	59.887	ENSMPUG00000013239	-	89	59.887	Mustela_putorius_furo
ENSTTRG00000001266	-	98	53.757	ENSNGAG00000018998	Apobec3	91	53.757	Nannospalax_galili
ENSTTRG00000001266	-	99	53.333	ENSNLEG00000015218	-	85	53.333	Nomascus_leucogenys
ENSTTRG00000001266	-	99	42.045	ENSOCUG00000023913	-	84	42.045	Oryctolagus_cuniculus
ENSTTRG00000001266	-	100	78.090	ENSOARG00000016290	APOBEC3F	91	78.090	Ovis_aries
ENSTTRG00000001266	-	99	50.556	ENSPPAG00000036522	APOBEC3H	98	50.556	Pan_paniscus
ENSTTRG00000001266	-	99	34.783	ENSPPRG00000003675	-	94	34.783	Panthera_pardus
ENSTTRG00000001266	-	100	60.335	ENSPPRG00000003941	-	92	60.335	Panthera_pardus
ENSTTRG00000001266	-	100	60.894	ENSPTIG00000010283	-	92	60.894	Panthera_tigris_altaica
ENSTTRG00000001266	-	99	50.556	ENSPTRG00000014390	APOBEC3H	98	50.556	Pan_troglodytes
ENSTTRG00000001266	-	100	51.099	ENSPANG00000010774	APOBEC3H	94	48.333	Papio_anubis
ENSTTRG00000001266	-	99	47.778	ENSPEMG00000000456	Apobec3	74	47.778	Peromyscus_maniculatus_bairdii
ENSTTRG00000001266	-	99	50.556	ENSPPYG00000011834	-	85	50.556	Pongo_abelii
ENSTTRG00000001266	-	99	49.432	ENSPCAG00000015655	-	99	49.432	Procavia_capensis
ENSTTRG00000001266	-	74	41.221	ENSPVAG00000024161	-	99	41.221	Pteropus_vampyrus
ENSTTRG00000001266	-	74	36.641	ENSPVAG00000024267	-	99	36.641	Pteropus_vampyrus
ENSTTRG00000001266	-	99	56.818	ENSPVAG00000009462	-	99	56.818	Pteropus_vampyrus
ENSTTRG00000001266	-	100	45.856	ENSRNOG00000016852	Apobec3	85	45.856	Rattus_norvegicus
ENSTTRG00000001266	-	99	51.111	ENSRBIG00000029088	APOBEC3H	88	54.412	Rhinopithecus_bieti
ENSTTRG00000001266	-	99	51.667	ENSRROG00000024699	APOBEC3H	88	54.412	Rhinopithecus_roxellana
ENSTTRG00000001266	-	99	50.549	ENSSBOG00000030005	APOBEC3H	99	50.549	Saimiri_boliviensis_boliviensis
ENSTTRG00000001266	-	99	75.141	ENSSSCG00000000091	APOBEC3B	79	75.141	Sus_scrofa
ENSTTRG00000001266	-	96	60.000	ENSTBEG00000001532	-	99	60.000	Tupaia_belangeri
ENSTTRG00000001266	-	99	55.978	ENSUAMG00000004427	-	83	55.978	Ursus_americanus
ENSTTRG00000001266	-	100	57.865	ENSUMAG00000014435	-	92	57.865	Ursus_maritimus
ENSTTRG00000001266	-	71	72.441	ENSVPAG00000011108	-	99	72.441	Vicugna_pacos
ENSTTRG00000001266	-	99	74.359	ENSVVUG00000014624	-	58	74.359	Vulpes_vulpes