EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000001488 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 13780 bases
Position: chrGeneScaffold_3443:48128-61907
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000001404	KH_1	PF00013.29	8.4e-06	1	1
ENSTTRP00000001404	DEAD	PF00270.29	3.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000001488	-	1677	-	ENSTTRP00000001404	559 (aa)	-	UPI00018B5381

Gene Model

Click here to download ENSTTRG00000001488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000001488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000001488	-	58	40.286	ENSTTRG00000001906	DDX3X	53	40.286
ENSTTRG00000001488	-	70	42.716	ENSTTRG00000008793	DDX5	64	42.716
ENSTTRG00000001488	-	60	33.520	ENSTTRG00000015218	DDX18	52	33.520
ENSTTRG00000001488	-	58	30.966	ENSTTRG00000007251	DDX55	58	31.250
ENSTTRG00000001488	-	58	33.033	ENSTTRG00000003818	DDX49	69	33.033
ENSTTRG00000001488	-	61	34.085	ENSTTRG00000015836	DDX41	80	32.360
ENSTTRG00000001488	-	70	43.596	ENSTTRG00000005623	DDX17	63	43.842
ENSTTRG00000001488	-	61	34.795	ENSTTRG00000008917	DDX52	59	34.795
ENSTTRG00000001488	-	60	30.973	ENSTTRG00000004313	DDX6	69	30.973
ENSTTRG00000001488	-	57	36.025	ENSTTRG00000015036	DDX47	69	36.025
ENSTTRG00000001488	-	99	57.624	ENSTTRG00000016514	-	89	57.624
ENSTTRG00000001488	-	60	36.901	ENSTTRG00000004288	DDX27	53	34.450
ENSTTRG00000001488	-	59	30.631	ENSTTRG00000010208	EIF4A1	84	31.378
ENSTTRG00000001488	-	68	30.130	ENSTTRG00000008129	DDX59	60	30.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000001488	-	99	74.645	ENSAMEG00000007851	-	87	74.645	Ailuropoda_melanoleuca
ENSTTRG00000001488	-	99	81.932	ENSBTAG00000021814	-	87	81.932	Bos_taurus
ENSTTRG00000001488	-	99	69.162	ENSCAFG00020002717	-	86	69.162	Canis_lupus_dingo
ENSTTRG00000001488	-	99	72.824	ENSCAFG00020010029	-	87	72.824	Canis_lupus_dingo
ENSTTRG00000001488	-	99	82.111	ENSCHIG00000017351	-	87	82.111	Capra_hircus
ENSTTRG00000001488	-	88	65.339	ENSCAPG00000004247	-	100	65.339	Cavia_aperea
ENSTTRG00000001488	-	99	73.357	ENSCPOG00000003991	-	87	73.357	Cavia_porcellus
ENSTTRG00000001488	-	99	68.773	ENSCLAG00000010261	-	86	68.941	Chinchilla_lanigera
ENSTTRG00000001488	-	69	75.472	ENSCHOG00000003450	-	69	75.472	Choloepus_hoffmanni
ENSTTRG00000001488	-	99	74.067	ENSCGRG00001001145	Ddx43	87	74.067	Cricetulus_griseus_chok1gshd
ENSTTRG00000001488	-	99	73.890	ENSCGRG00000010217	Ddx43	100	73.890	Cricetulus_griseus_crigri
ENSTTRG00000001488	-	99	75.752	ENSDNOG00000017589	-	87	75.752	Dasypus_novemcinctus
ENSTTRG00000001488	-	99	73.712	ENSDORG00000030010	Ddx43	87	73.712	Dipodomys_ordii
ENSTTRG00000001488	-	76	77.545	ENSETEG00000001887	-	67	77.545	Echinops_telfairi
ENSTTRG00000001488	-	99	77.442	ENSEASG00005004346	-	80	77.442	Equus_asinus_asinus
ENSTTRG00000001488	-	99	77.620	ENSECAG00000017971	DDX43	88	77.620	Equus_caballus
ENSTTRG00000001488	-	99	71.277	ENSFCAG00000031631	-	87	71.277	Felis_catus
ENSTTRG00000001488	-	99	71.403	ENSHGLG00000001118	-	100	71.403	Heterocephalus_glaber_female
ENSTTRG00000001488	-	99	71.403	ENSHGLG00100011895	-	88	71.403	Heterocephalus_glaber_male
ENSTTRG00000001488	-	99	65.709	ENSSTOG00000032538	-	100	65.709	Ictidomys_tridecemlineatus
ENSTTRG00000001488	-	99	72.291	ENSJJAG00000014184	Ddx43	87	72.291	Jaculus_jaculus
ENSTTRG00000001488	-	99	74.067	ENSLAFG00000012755	-	93	74.067	Loxodonta_africana
ENSTTRG00000001488	-	99	73.890	ENSMAUG00000001441	Ddx43	87	73.890	Mesocricetus_auratus
ENSTTRG00000001488	-	99	73.890	ENSMOCG00000012956	Ddx43	87	73.890	Microtus_ochrogaster
ENSTTRG00000001488	-	99	73.357	MGP_CAROLIEiJ_G0032467	Ddx43	87	73.357	Mus_caroli
ENSTTRG00000001488	-	99	73.712	ENSMUSG00000070291	Ddx43	87	73.712	Mus_musculus
ENSTTRG00000001488	-	89	74.008	MGP_PahariEiJ_G0015333	Ddx43	86	74.008	Mus_pahari
ENSTTRG00000001488	-	99	73.712	MGP_SPRETEiJ_G0033607	Ddx43	87	73.712	Mus_spretus
ENSTTRG00000001488	-	99	75.044	ENSMPUG00000004342	-	87	75.044	Mustela_putorius_furo
ENSTTRG00000001488	-	99	73.982	ENSMLUG00000017604	-	87	73.982	Myotis_lucifugus
ENSTTRG00000001488	-	99	73.002	ENSNGAG00000015102	Ddx43	87	73.002	Nannospalax_galili
ENSTTRG00000001488	-	85	62.534	ENSOPRG00000013523	-	86	62.534	Ochotona_princeps
ENSTTRG00000001488	-	96	70.221	ENSODEG00000016207	-	99	70.221	Octodon_degus
ENSTTRG00000001488	-	99	61.170	ENSOCUG00000025811	-	87	61.170	Oryctolagus_cuniculus
ENSTTRG00000001488	-	99	69.805	ENSOCUG00000006338	-	87	69.805	Oryctolagus_cuniculus
ENSTTRG00000001488	-	99	82.111	ENSOARG00000010873	-	87	82.111	Ovis_aries
ENSTTRG00000001488	-	99	71.454	ENSPTIG00000017842	-	87	71.454	Panthera_tigris_altaica
ENSTTRG00000001488	-	99	74.245	ENSPEMG00000023986	Ddx43	100	74.245	Peromyscus_maniculatus_bairdii
ENSTTRG00000001488	-	99	72.776	ENSPCAG00000005962	-	87	72.776	Procavia_capensis
ENSTTRG00000001488	-	99	76.283	ENSPVAG00000012718	-	100	76.283	Pteropus_vampyrus
ENSTTRG00000001488	-	99	73.712	ENSRNOG00000050868	Ddx43	87	73.712	Rattus_norvegicus
ENSTTRG00000001488	-	96	74.635	ENSSARG00000013493	-	100	74.635	Sorex_araneus
ENSTTRG00000001488	-	99	81.216	ENSSSCG00000004287	-	87	81.216	Sus_scrofa
ENSTTRG00000001488	-	77	77.574	ENSUAMG00000012894	-	68	77.574	Ursus_americanus
ENSTTRG00000001488	-	99	74.690	ENSUMAG00000012291	-	87	74.690	Ursus_maritimus
ENSTTRG00000001488	-	81	85.398	ENSVPAG00000004969	-	75	85.398	Vicugna_pacos
ENSTTRG00000001488	-	99	73.535	ENSVVUG00000013908	-	87	73.535	Vulpes_vulpes