EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000001535 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 19517 bases
Position: chrGeneScaffold_496:333376-352892
Accession: 101321273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000001448	PRP21_like_P	PF12230.8	3.8e-52	1	1
ENSTTRP00000001448	Surp	PF01805.20	3.8e-46	1	2
ENSTTRP00000001448	Surp	PF01805.20	3.8e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000001535	-	2385	-	ENSTTRP00000001448	794 (aa)	XP_004311404	A0A2U3UZ04

Gene Model

Click here to download ENSTTRG00000001535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000001535's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000001535	SF3A1	100	98.489	ENSG00000099995	SF3A1	100	98.489	Homo_sapiens
ENSTTRG00000001535	SF3A1	100	83.920	ENSAPOG00000020465	sf3a1	99	84.419	Acanthochromis_polyacanthus
ENSTTRG00000001535	SF3A1	100	98.744	ENSAMEG00000007737	SF3A1	100	98.744	Ailuropoda_melanoleuca
ENSTTRG00000001535	SF3A1	100	83.920	ENSACIG00000020672	sf3a1	99	84.419	Amphilophus_citrinellus
ENSTTRG00000001535	SF3A1	100	83.645	ENSAOCG00000003060	sf3a1	99	84.419	Amphiprion_ocellaris
ENSTTRG00000001535	SF3A1	100	83.770	ENSAPEG00000010735	sf3a1	99	84.547	Amphiprion_percula
ENSTTRG00000001535	SF3A1	96	85.566	ENSATEG00000021201	sf3a1	98	84.724	Anabas_testudineus
ENSTTRG00000001535	SF3A1	95	93.404	ENSAPLG00000009057	SF3A1	99	92.655	Anas_platyrhynchos
ENSTTRG00000001535	SF3A1	100	85.486	ENSACAG00000009415	SF3A1	100	86.839	Anolis_carolinensis
ENSTTRG00000001535	SF3A1	100	98.866	ENSANAG00000032045	SF3A1	100	98.866	Aotus_nancymaae
ENSTTRG00000001535	SF3A1	100	84.375	ENSACLG00000012622	sf3a1	99	85.422	Astatotilapia_calliptera
ENSTTRG00000001535	SF3A1	99	83.565	ENSAMXG00000005382	sf3a1	99	84.299	Astyanax_mexicanus
ENSTTRG00000001535	SF3A1	100	99.370	ENSBTAG00000003390	SF3A1	100	99.370	Bos_taurus
ENSTTRG00000001535	SF3A1	84	43.011	WBGene00004188	prp-21	94	43.063	Caenorhabditis_elegans
ENSTTRG00000001535	SF3A1	100	98.741	ENSCJAG00000010370	SF3A1	100	98.741	Callithrix_jacchus
ENSTTRG00000001535	SF3A1	100	99.370	ENSCAFG00000012559	SF3A1	100	99.370	Canis_familiaris
ENSTTRG00000001535	SF3A1	100	99.370	ENSCAFG00020000838	SF3A1	100	99.370	Canis_lupus_dingo
ENSTTRG00000001535	SF3A1	100	99.244	ENSCHIG00000018642	SF3A1	100	99.244	Capra_hircus
ENSTTRG00000001535	SF3A1	100	99.244	ENSTSYG00000004739	SF3A1	100	99.244	Carlito_syrichta
ENSTTRG00000001535	SF3A1	94	81.200	ENSCAPG00000015414	SF3A1	98	81.200	Cavia_aperea
ENSTTRG00000001535	SF3A1	100	98.741	ENSCPOG00000014589	SF3A1	100	98.741	Cavia_porcellus
ENSTTRG00000001535	SF3A1	100	98.866	ENSCCAG00000032006	SF3A1	100	98.866	Cebus_capucinus
ENSTTRG00000001535	SF3A1	100	98.866	ENSCATG00000029241	SF3A1	100	98.866	Cercocebus_atys
ENSTTRG00000001535	SF3A1	100	98.237	ENSCLAG00000006508	SF3A1	100	98.237	Chinchilla_lanigera
ENSTTRG00000001535	SF3A1	100	98.741	ENSCSAG00000009470	SF3A1	100	98.741	Chlorocebus_sabaeus
ENSTTRG00000001535	SF3A1	61	99.083	ENSCHOG00000005201	SF3A1	69	99.083	Choloepus_hoffmanni
ENSTTRG00000001535	SF3A1	100	90.440	ENSCPBG00000007595	SF3A1	100	90.566	Chrysemys_picta_bellii
ENSTTRG00000001535	SF3A1	94	52.180	ENSCING00000008526	-	66	57.553	Ciona_intestinalis
ENSTTRG00000001535	SF3A1	96	51.418	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSTTRG00000001535	SF3A1	100	98.741	ENSCANG00000033564	SF3A1	100	98.741	Colobus_angolensis_palliatus
ENSTTRG00000001535	SF3A1	100	98.237	ENSCGRG00001008933	Sf3a1	100	98.237	Cricetulus_griseus_chok1gshd
ENSTTRG00000001535	SF3A1	100	98.237	ENSCGRG00000006127	Sf3a1	100	98.237	Cricetulus_griseus_crigri
ENSTTRG00000001535	SF3A1	99	81.622	ENSCSEG00000010792	sf3a1	99	81.562	Cynoglossus_semilaevis
ENSTTRG00000001535	SF3A1	100	82.915	ENSCVAG00000004560	sf3a1	98	83.875	Cyprinodon_variegatus
ENSTTRG00000001535	SF3A1	100	81.932	ENSDARG00000041887	sf3a1	97	84.115	Danio_rerio
ENSTTRG00000001535	SF3A1	100	98.744	ENSDNOG00000010629	SF3A1	100	98.744	Dasypus_novemcinctus
ENSTTRG00000001535	SF3A1	100	99.118	ENSDORG00000005613	Sf3a1	100	99.118	Dipodomys_ordii
ENSTTRG00000001535	SF3A1	79	61.351	FBgn0266917	Sf3a1	85	59.173	Drosophila_melanogaster
ENSTTRG00000001535	SF3A1	84	96.861	ENSETEG00000017194	SF3A1	100	94.737	Echinops_telfairi
ENSTTRG00000001535	SF3A1	100	65.100	ENSEBUG00000001285	sf3a1	96	67.324	Eptatretus_burgeri
ENSTTRG00000001535	SF3A1	100	99.244	ENSEASG00005010254	SF3A1	100	99.244	Equus_asinus_asinus
ENSTTRG00000001535	SF3A1	100	99.244	ENSECAG00000023962	SF3A1	100	99.244	Equus_caballus
ENSTTRG00000001535	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSTTRG00000001535	SF3A1	100	82.103	ENSELUG00000022578	sf3a1	98	82.074	Esox_lucius
ENSTTRG00000001535	SF3A1	100	99.118	ENSFCAG00000011932	SF3A1	100	99.118	Felis_catus
ENSTTRG00000001535	SF3A1	95	92.470	ENSFALG00000006944	SF3A1	100	91.321	Ficedula_albicollis
ENSTTRG00000001535	SF3A1	100	98.615	ENSFDAG00000009560	SF3A1	100	98.615	Fukomys_damarensis
ENSTTRG00000001535	SF3A1	100	83.794	ENSFHEG00000010866	sf3a1	98	84.915	Fundulus_heteroclitus
ENSTTRG00000001535	SF3A1	100	81.006	ENSGMOG00000016024	sf3a1	99	80.127	Gadus_morhua
ENSTTRG00000001535	SF3A1	95	93.395	ENSGALG00000007937	SF3A1	100	91.824	Gallus_gallus
ENSTTRG00000001535	SF3A1	100	83.040	ENSGAFG00000009111	sf3a1	97	84.334	Gambusia_affinis
ENSTTRG00000001535	SF3A1	100	81.887	ENSGACG00000011893	sf3a1	97	83.137	Gasterosteus_aculeatus
ENSTTRG00000001535	SF3A1	96	90.682	ENSGAGG00000000762	SF3A1	99	90.814	Gopherus_agassizii
ENSTTRG00000001535	SF3A1	100	98.489	ENSGGOG00000012631	SF3A1	100	98.489	Gorilla_gorilla
ENSTTRG00000001535	SF3A1	100	84.375	ENSHBUG00000015795	sf3a1	99	85.422	Haplochromis_burtoni
ENSTTRG00000001535	SF3A1	100	98.866	ENSHGLG00000007907	SF3A1	100	98.866	Heterocephalus_glaber_female
ENSTTRG00000001535	SF3A1	100	98.866	ENSHGLG00100013799	SF3A1	100	98.866	Heterocephalus_glaber_male
ENSTTRG00000001535	SF3A1	100	80.276	ENSHCOG00000015423	sf3a1	99	80.541	Hippocampus_comes
ENSTTRG00000001535	SF3A1	96	83.073	ENSIPUG00000002470	sf3a1	98	83.203	Ictalurus_punctatus
ENSTTRG00000001535	SF3A1	100	98.992	ENSSTOG00000013892	SF3A1	100	98.992	Ictidomys_tridecemlineatus
ENSTTRG00000001535	SF3A1	100	98.616	ENSJJAG00000022566	Sf3a1	100	98.616	Jaculus_jaculus
ENSTTRG00000001535	SF3A1	100	82.161	ENSKMAG00000002400	sf3a1	98	84.005	Kryptolebias_marmoratus
ENSTTRG00000001535	SF3A1	100	82.286	ENSLBEG00000022974	sf3a1	99	82.861	Labrus_bergylta
ENSTTRG00000001535	SF3A1	100	86.717	ENSLACG00000003565	SF3A1	97	88.036	Latimeria_chalumnae
ENSTTRG00000001535	SF3A1	100	85.088	ENSLOCG00000008251	sf3a1	97	86.883	Lepisosteus_oculatus
ENSTTRG00000001535	SF3A1	100	98.741	ENSLAFG00000000448	SF3A1	100	98.741	Loxodonta_africana
ENSTTRG00000001535	SF3A1	98	62.087	ENSLAFG00000026032	-	98	62.087	Loxodonta_africana
ENSTTRG00000001535	SF3A1	100	98.615	ENSMFAG00000031979	SF3A1	100	98.615	Macaca_fascicularis
ENSTTRG00000001535	SF3A1	100	98.615	ENSMMUG00000005547	SF3A1	100	98.615	Macaca_mulatta
ENSTTRG00000001535	SF3A1	100	98.489	ENSMNEG00000037229	SF3A1	100	98.489	Macaca_nemestrina
ENSTTRG00000001535	SF3A1	100	98.741	ENSMLEG00000041908	SF3A1	100	98.741	Mandrillus_leucophaeus
ENSTTRG00000001535	SF3A1	97	85.401	ENSMAMG00000006460	sf3a1	97	85.401	Mastacembelus_armatus
ENSTTRG00000001535	SF3A1	100	84.375	ENSMZEG00005009633	sf3a1	99	85.422	Maylandia_zebra
ENSTTRG00000001535	SF3A1	95	93.395	ENSMGAG00000001330	SF3A1	99	92.645	Meleagris_gallopavo
ENSTTRG00000001535	SF3A1	92	94.134	ENSMAUG00000020317	Sf3a1	94	93.997	Mesocricetus_auratus
ENSTTRG00000001535	SF3A1	100	98.866	ENSMICG00000010038	SF3A1	100	98.866	Microcebus_murinus
ENSTTRG00000001535	SF3A1	100	98.363	ENSMOCG00000008438	Sf3a1	100	98.363	Microtus_ochrogaster
ENSTTRG00000001535	SF3A1	100	81.281	ENSMMOG00000015588	sf3a1	98	81.748	Mola_mola
ENSTTRG00000001535	SF3A1	100	97.607	ENSMODG00000009270	SF3A1	100	97.607	Monodelphis_domestica
ENSTTRG00000001535	SF3A1	100	83.899	ENSMALG00000000148	sf3a1	99	85.306	Monopterus_albus
ENSTTRG00000001535	SF3A1	100	97.859	MGP_CAROLIEiJ_G0016029	Sf3a1	100	97.859	Mus_caroli
ENSTTRG00000001535	SF3A1	100	97.859	ENSMUSG00000002129	Sf3a1	100	97.859	Mus_musculus
ENSTTRG00000001535	SF3A1	100	97.733	MGP_PahariEiJ_G0016862	Sf3a1	100	97.733	Mus_pahari
ENSTTRG00000001535	SF3A1	100	97.859	MGP_SPRETEiJ_G0016870	Sf3a1	100	97.859	Mus_spretus
ENSTTRG00000001535	SF3A1	100	99.118	ENSMPUG00000013144	SF3A1	100	99.118	Mustela_putorius_furo
ENSTTRG00000001535	SF3A1	100	98.992	ENSMLUG00000002139	SF3A1	100	98.992	Myotis_lucifugus
ENSTTRG00000001535	SF3A1	100	98.615	ENSNGAG00000016977	Sf3a1	100	98.615	Nannospalax_galili
ENSTTRG00000001535	SF3A1	100	83.791	ENSNBRG00000016642	sf3a1	96	86.842	Neolamprologus_brichardi
ENSTTRG00000001535	SF3A1	100	98.741	ENSNLEG00000003686	SF3A1	100	98.741	Nomascus_leucogenys
ENSTTRG00000001535	SF3A1	96	87.648	ENSMEUG00000008741	SF3A1	100	87.254	Notamacropus_eugenii
ENSTTRG00000001535	SF3A1	100	98.237	ENSOPRG00000016636	SF3A1	100	98.237	Ochotona_princeps
ENSTTRG00000001535	SF3A1	100	98.489	ENSODEG00000002571	SF3A1	100	98.489	Octodon_degus
ENSTTRG00000001535	SF3A1	100	84.125	ENSONIG00000010848	sf3a1	99	84.802	Oreochromis_niloticus
ENSTTRG00000001535	SF3A1	100	98.866	ENSOCUG00000007633	SF3A1	100	98.866	Oryctolagus_cuniculus
ENSTTRG00000001535	SF3A1	96	81.782	ENSORLG00000013050	sf3a1	99	83.333	Oryzias_latipes
ENSTTRG00000001535	SF3A1	99	80.278	ENSORLG00020003236	sf3a1	94	83.467	Oryzias_latipes_hni
ENSTTRG00000001535	SF3A1	100	82.161	ENSORLG00015017411	sf3a1	99	83.763	Oryzias_latipes_hsok
ENSTTRG00000001535	SF3A1	100	82.663	ENSOMEG00000013362	sf3a1	99	83.634	Oryzias_melastigma
ENSTTRG00000001535	SF3A1	100	98.741	ENSOGAG00000012931	SF3A1	100	98.741	Otolemur_garnettii
ENSTTRG00000001535	SF3A1	100	97.481	ENSOARG00000006849	SF3A1	100	97.481	Ovis_aries
ENSTTRG00000001535	SF3A1	100	97.481	ENSPPAG00000041790	SF3A1	100	97.481	Pan_paniscus
ENSTTRG00000001535	SF3A1	100	99.118	ENSPPRG00000004391	SF3A1	100	99.118	Panthera_pardus
ENSTTRG00000001535	SF3A1	97	98.965	ENSPTIG00000000844	SF3A1	100	98.965	Panthera_tigris_altaica
ENSTTRG00000001535	SF3A1	100	98.489	ENSPTRG00000014240	SF3A1	100	98.489	Pan_troglodytes
ENSTTRG00000001535	SF3A1	100	98.741	ENSPANG00000020772	SF3A1	100	98.741	Papio_anubis
ENSTTRG00000001535	SF3A1	83	93.407	ENSPSIG00000012803	SF3A1	96	93.407	Pelodiscus_sinensis
ENSTTRG00000001535	SF3A1	96	84.052	ENSPMGG00000023096	sf3a1	100	84.183	Periophthalmus_magnuspinnatus
ENSTTRG00000001535	SF3A1	100	98.489	ENSPEMG00000009494	Sf3a1	100	98.489	Peromyscus_maniculatus_bairdii
ENSTTRG00000001535	SF3A1	69	77.536	ENSPMAG00000007139	-	90	78.358	Petromyzon_marinus
ENSTTRG00000001535	SF3A1	100	97.481	ENSPCIG00000022692	SF3A1	100	97.481	Phascolarctos_cinereus
ENSTTRG00000001535	SF3A1	100	75.282	ENSPFOG00000016768	sf3a1	93	78.940	Poecilia_formosa
ENSTTRG00000001535	SF3A1	100	83.438	ENSPLAG00000017268	sf3a1	97	84.856	Poecilia_latipinna
ENSTTRG00000001535	SF3A1	84	86.145	ENSPMEG00000019811	sf3a1	98	85.392	Poecilia_mexicana
ENSTTRG00000001535	SF3A1	100	83.563	ENSPREG00000010347	sf3a1	97	85.248	Poecilia_reticulata
ENSTTRG00000001535	SF3A1	100	98.741	ENSPPYG00000011707	SF3A1	100	98.741	Pongo_abelii
ENSTTRG00000001535	SF3A1	57	99.528	ENSPCAG00000003266	SF3A1	57	99.528	Procavia_capensis
ENSTTRG00000001535	SF3A1	100	98.866	ENSPCOG00000026630	SF3A1	100	98.866	Propithecus_coquereli
ENSTTRG00000001535	SF3A1	100	94.081	ENSPVAG00000017719	SF3A1	94	97.319	Pteropus_vampyrus
ENSTTRG00000001535	SF3A1	100	84.375	ENSPNYG00000018706	sf3a1	99	85.422	Pundamilia_nyererei
ENSTTRG00000001535	SF3A1	97	83.697	ENSPNAG00000003721	sf3a1	99	84.724	Pygocentrus_nattereri
ENSTTRG00000001535	SF3A1	100	97.859	ENSRNOG00000005218	Sf3a1	100	97.859	Rattus_norvegicus
ENSTTRG00000001535	SF3A1	100	98.615	ENSRBIG00000032167	SF3A1	100	98.615	Rhinopithecus_bieti
ENSTTRG00000001535	SF3A1	100	98.615	ENSRROG00000044908	SF3A1	100	98.615	Rhinopithecus_roxellana
ENSTTRG00000001535	SF3A1	97	94.323	ENSSBOG00000021960	SF3A1	99	99.260	Saimiri_boliviensis_boliviensis
ENSTTRG00000001535	SF3A1	97	94.315	ENSSHAG00000003666	SF3A1	98	94.315	Sarcophilus_harrisii
ENSTTRG00000001535	SF3A1	100	83.625	ENSSFOG00015004579	sf3a1	99	85.385	Scleropages_formosus
ENSTTRG00000001535	SF3A1	100	81.784	ENSSMAG00000004275	sf3a1	97	82.898	Scophthalmus_maximus
ENSTTRG00000001535	SF3A1	100	83.668	ENSSDUG00000022219	sf3a1	99	84.547	Seriola_dumerili
ENSTTRG00000001535	SF3A1	100	83.668	ENSSLDG00000012642	sf3a1	99	84.547	Seriola_lalandi_dorsalis
ENSTTRG00000001535	SF3A1	97	95.343	ENSSARG00000005960	SF3A1	100	94.955	Sorex_araneus
ENSTTRG00000001535	SF3A1	96	91.332	ENSSPUG00000018863	SF3A1	100	91.056	Sphenodon_punctatus
ENSTTRG00000001535	SF3A1	100	84.296	ENSSPAG00000011856	sf3a1	99	84.674	Stegastes_partitus
ENSTTRG00000001535	SF3A1	100	99.244	ENSSSCG00000010002	SF3A1	100	99.244	Sus_scrofa
ENSTTRG00000001535	SF3A1	95	93.412	ENSTGUG00000010547	SF3A1	99	92.876	Taeniopygia_guttata
ENSTTRG00000001535	SF3A1	100	81.030	ENSTRUG00000006118	sf3a1	97	81.854	Takifugu_rubripes
ENSTTRG00000001535	SF3A1	62	80.000	ENSTNIG00000005713	sf3a1	89	85.714	Tetraodon_nigroviridis
ENSTTRG00000001535	SF3A1	100	90.806	ENSTBEG00000012771	SF3A1	100	90.680	Tupaia_belangeri
ENSTTRG00000001535	SF3A1	99	98.096	ENSUAMG00000006750	SF3A1	99	98.096	Ursus_americanus
ENSTTRG00000001535	SF3A1	99	98.217	ENSUMAG00000016665	SF3A1	98	99.223	Ursus_maritimus
ENSTTRG00000001535	SF3A1	100	99.370	ENSVVUG00000003075	SF3A1	100	99.370	Vulpes_vulpes
ENSTTRG00000001535	SF3A1	100	85.589	ENSXETG00000016144	sf3a1	100	85.213	Xenopus_tropicalis
ENSTTRG00000001535	SF3A1	100	82.789	ENSXCOG00000015653	sf3a1	97	84.073	Xiphophorus_couchianus
ENSTTRG00000001535	SF3A1	100	82.915	ENSXMAG00000002753	sf3a1	97	84.204	Xiphophorus_maculatus