EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000001555 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 6054 bases
Position: chrGeneScaffold_2442:51072-57125
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000001465	PseudoU_synth_2	PF00849.22	4.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000001555	RPUSD4-201	1131	-	ENSTTRP00000001465	376 (aa)	-	UPI00018B6355

Gene Model

Click here to download ENSTTRG00000001555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000001555's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000001555	RPUSD4	71	31.359	ENSTTRG00000007544	RPUSD3	78	31.359

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000001555	RPUSD4	100	80.106	ENSG00000165526	RPUSD4	100	80.106	Homo_sapiens
ENSTTRG00000001555	RPUSD4	90	51.445	ENSAPOG00000011024	rpusd4	85	51.445	Acanthochromis_polyacanthus
ENSTTRG00000001555	RPUSD4	67	79.279	ENSAMEG00000005953	-	100	79.279	Ailuropoda_melanoleuca
ENSTTRG00000001555	RPUSD4	100	83.289	ENSAMEG00000000127	-	100	83.289	Ailuropoda_melanoleuca
ENSTTRG00000001555	RPUSD4	85	49.383	ENSACIG00000003533	rpusd4	95	49.383	Amphilophus_citrinellus
ENSTTRG00000001555	RPUSD4	88	51.320	ENSAOCG00000015409	rpusd4	83	51.320	Amphiprion_ocellaris
ENSTTRG00000001555	RPUSD4	88	51.917	ENSAPEG00000018935	rpusd4	83	51.613	Amphiprion_percula
ENSTTRG00000001555	RPUSD4	87	50.904	ENSATEG00000008059	rpusd4	81	50.904	Anabas_testudineus
ENSTTRG00000001555	RPUSD4	74	59.140	ENSAPLG00000013250	RPUSD4	99	57.966	Anas_platyrhynchos
ENSTTRG00000001555	RPUSD4	97	58.424	ENSACAG00000000189	RPUSD4	100	58.424	Anolis_carolinensis
ENSTTRG00000001555	RPUSD4	98	79.784	ENSANAG00000024050	RPUSD4	99	79.784	Aotus_nancymaae
ENSTTRG00000001555	RPUSD4	86	51.524	ENSACLG00000020996	rpusd4	84	51.524	Astatotilapia_calliptera
ENSTTRG00000001555	RPUSD4	90	49.133	ENSAMXG00000031479	rpusd4	95	49.852	Astyanax_mexicanus
ENSTTRG00000001555	RPUSD4	100	84.881	ENSBTAG00000020900	RPUSD4	100	84.881	Bos_taurus
ENSTTRG00000001555	RPUSD4	98	80.270	ENSCJAG00000042850	RPUSD4	93	80.270	Callithrix_jacchus
ENSTTRG00000001555	RPUSD4	100	80.952	ENSCAFG00000010488	RPUSD4	100	80.952	Canis_familiaris
ENSTTRG00000001555	RPUSD4	100	80.952	ENSCAFG00020010621	RPUSD4	100	80.952	Canis_lupus_dingo
ENSTTRG00000001555	RPUSD4	100	85.185	ENSCHIG00000009975	RPUSD4	100	85.185	Capra_hircus
ENSTTRG00000001555	RPUSD4	100	83.511	ENSTSYG00000008456	RPUSD4	100	83.511	Carlito_syrichta
ENSTTRG00000001555	RPUSD4	67	78.571	ENSCAPG00000006040	RPUSD4	98	78.571	Cavia_aperea
ENSTTRG00000001555	RPUSD4	100	79.787	ENSCPOG00000014971	RPUSD4	100	79.787	Cavia_porcellus
ENSTTRG00000001555	RPUSD4	98	80.054	ENSCCAG00000027838	RPUSD4	99	80.054	Cebus_capucinus
ENSTTRG00000001555	RPUSD4	100	80.371	ENSCATG00000041570	RPUSD4	100	80.371	Cercocebus_atys
ENSTTRG00000001555	RPUSD4	100	81.432	ENSCLAG00000016553	RPUSD4	100	81.432	Chinchilla_lanigera
ENSTTRG00000001555	RPUSD4	100	80.106	ENSCSAG00000002274	RPUSD4	100	80.106	Chlorocebus_sabaeus
ENSTTRG00000001555	RPUSD4	75	82.686	ENSCHOG00000010249	RPUSD4	100	82.686	Choloepus_hoffmanni
ENSTTRG00000001555	RPUSD4	76	66.084	ENSCPBG00000011175	RPUSD4	99	66.084	Chrysemys_picta_bellii
ENSTTRG00000001555	RPUSD4	72	43.165	ENSCSAVG00000000872	-	54	43.165	Ciona_savignyi
ENSTTRG00000001555	RPUSD4	100	79.045	ENSCANG00000039684	RPUSD4	100	79.045	Colobus_angolensis_palliatus
ENSTTRG00000001555	RPUSD4	100	80.106	ENSCGRG00001024141	Rpusd4	100	80.106	Cricetulus_griseus_chok1gshd
ENSTTRG00000001555	RPUSD4	100	80.106	ENSCGRG00000014415	Rpusd4	100	80.106	Cricetulus_griseus_crigri
ENSTTRG00000001555	RPUSD4	53	42.233	ENSCSEG00000006462	-	90	42.233	Cynoglossus_semilaevis
ENSTTRG00000001555	RPUSD4	88	50.445	ENSCVAG00000000392	rpusd4	95	50.445	Cyprinodon_variegatus
ENSTTRG00000001555	RPUSD4	88	50.148	ENSCVAG00000008761	rpusd4	94	47.568	Cyprinodon_variegatus
ENSTTRG00000001555	RPUSD4	93	46.307	ENSDARG00000012674	rpusd4	98	46.591	Danio_rerio
ENSTTRG00000001555	RPUSD4	100	77.188	ENSDNOG00000020026	RPUSD4	100	77.188	Dasypus_novemcinctus
ENSTTRG00000001555	RPUSD4	100	81.167	ENSDORG00000016717	Rpusd4	100	81.167	Dipodomys_ordii
ENSTTRG00000001555	RPUSD4	99	79.570	ENSETEG00000013953	RPUSD4	99	79.570	Echinops_telfairi
ENSTTRG00000001555	RPUSD4	100	84.350	ENSEASG00005022982	RPUSD4	100	84.350	Equus_asinus_asinus
ENSTTRG00000001555	RPUSD4	100	84.085	ENSECAG00000000557	RPUSD4	100	84.085	Equus_caballus
ENSTTRG00000001555	RPUSD4	80	82.065	ENSEEUG00000014036	RPUSD4	80	82.065	Erinaceus_europaeus
ENSTTRG00000001555	RPUSD4	87	53.959	ENSELUG00000008075	rpusd4	89	53.959	Esox_lucius
ENSTTRG00000001555	RPUSD4	100	82.493	ENSFCAG00000029789	RPUSD4	100	82.493	Felis_catus
ENSTTRG00000001555	RPUSD4	88	57.057	ENSFALG00000005171	RPUSD4	98	57.057	Ficedula_albicollis
ENSTTRG00000001555	RPUSD4	100	79.576	ENSFDAG00000014307	RPUSD4	100	79.576	Fukomys_damarensis
ENSTTRG00000001555	RPUSD4	94	47.709	ENSFHEG00000004329	rpusd4	95	47.709	Fundulus_heteroclitus
ENSTTRG00000001555	RPUSD4	85	50.154	ENSGMOG00000017726	rpusd4	96	50.154	Gadus_morhua
ENSTTRG00000001555	RPUSD4	91	55.398	ENSGALG00000024326	RPUSD4	97	55.899	Gallus_gallus
ENSTTRG00000001555	RPUSD4	89	47.550	ENSGAFG00000021559	rpusd4	87	47.550	Gambusia_affinis
ENSTTRG00000001555	RPUSD4	89	49.263	ENSGACG00000001657	rpusd4	100	49.263	Gasterosteus_aculeatus
ENSTTRG00000001555	RPUSD4	89	62.090	ENSGAGG00000000132	RPUSD4	93	62.090	Gopherus_agassizii
ENSTTRG00000001555	RPUSD4	100	79.841	ENSGGOG00000016494	RPUSD4	100	79.841	Gorilla_gorilla
ENSTTRG00000001555	RPUSD4	86	51.524	ENSHBUG00000022838	rpusd4	84	51.524	Haplochromis_burtoni
ENSTTRG00000001555	RPUSD4	100	79.841	ENSHGLG00000002285	RPUSD4	100	79.841	Heterocephalus_glaber_female
ENSTTRG00000001555	RPUSD4	100	79.841	ENSHGLG00100006385	RPUSD4	100	79.841	Heterocephalus_glaber_male
ENSTTRG00000001555	RPUSD4	88	50.298	ENSHCOG00000006612	rpusd4	85	50.298	Hippocampus_comes
ENSTTRG00000001555	RPUSD4	86	51.220	ENSIPUG00000023879	rusd4	85	51.220	Ictalurus_punctatus
ENSTTRG00000001555	RPUSD4	97	83.196	ENSSTOG00000025280	RPUSD4	100	83.196	Ictidomys_tridecemlineatus
ENSTTRG00000001555	RPUSD4	98	81.622	ENSJJAG00000018673	Rpusd4	99	81.622	Jaculus_jaculus
ENSTTRG00000001555	RPUSD4	89	51.471	ENSKMAG00000021805	rpusd4	88	51.471	Kryptolebias_marmoratus
ENSTTRG00000001555	RPUSD4	83	51.863	ENSLBEG00000020394	rpusd4	90	51.863	Labrus_bergylta
ENSTTRG00000001555	RPUSD4	85	61.610	ENSLACG00000011028	RPUSD4	85	60.417	Latimeria_chalumnae
ENSTTRG00000001555	RPUSD4	85	47.840	ENSLOCG00000003124	rpusd4	86	47.531	Lepisosteus_oculatus
ENSTTRG00000001555	RPUSD4	100	80.585	ENSLAFG00000005211	RPUSD4	100	80.585	Loxodonta_africana
ENSTTRG00000001555	RPUSD4	100	80.371	ENSMFAG00000039513	RPUSD4	100	80.371	Macaca_fascicularis
ENSTTRG00000001555	RPUSD4	100	80.106	ENSMMUG00000007933	RPUSD4	100	80.106	Macaca_mulatta
ENSTTRG00000001555	RPUSD4	100	80.371	ENSMNEG00000027414	RPUSD4	100	80.371	Macaca_nemestrina
ENSTTRG00000001555	RPUSD4	100	79.576	ENSMLEG00000042461	RPUSD4	100	79.576	Mandrillus_leucophaeus
ENSTTRG00000001555	RPUSD4	87	47.748	ENSMAMG00000023839	rpusd4	86	47.748	Mastacembelus_armatus
ENSTTRG00000001555	RPUSD4	86	51.524	ENSMZEG00005011999	rpusd4	84	51.524	Maylandia_zebra
ENSTTRG00000001555	RPUSD4	73	60.650	ENSMGAG00000000840	RPUSD4	99	58.255	Meleagris_gallopavo
ENSTTRG00000001555	RPUSD4	100	78.515	ENSMAUG00000010280	Rpusd4	100	78.515	Mesocricetus_auratus
ENSTTRG00000001555	RPUSD4	100	81.432	ENSMICG00000015979	RPUSD4	100	81.432	Microcebus_murinus
ENSTTRG00000001555	RPUSD4	98	76.819	ENSMOCG00000000661	Rpusd4	98	76.819	Microtus_ochrogaster
ENSTTRG00000001555	RPUSD4	78	55.184	ENSMMOG00000021731	rpusd4	88	55.184	Mola_mola
ENSTTRG00000001555	RPUSD4	92	72.334	ENSMODG00000004521	RPUSD4	89	72.334	Monodelphis_domestica
ENSTTRG00000001555	RPUSD4	81	51.935	ENSMALG00000005839	rpusd4	98	49.847	Monopterus_albus
ENSTTRG00000001555	RPUSD4	100	77.454	MGP_CAROLIEiJ_G0031954	Rpusd4	100	77.454	Mus_caroli
ENSTTRG00000001555	RPUSD4	100	76.923	ENSMUSG00000032044	Rpusd4	100	76.923	Mus_musculus
ENSTTRG00000001555	RPUSD4	100	78.249	MGP_PahariEiJ_G0014819	Rpusd4	100	78.249	Mus_pahari
ENSTTRG00000001555	RPUSD4	100	76.923	MGP_SPRETEiJ_G0033078	Rpusd4	100	76.923	Mus_spretus
ENSTTRG00000001555	RPUSD4	99	80.533	ENSMPUG00000006608	RPUSD4	99	80.533	Mustela_putorius_furo
ENSTTRG00000001555	RPUSD4	97	80.109	ENSMLUG00000017328	-	97	80.109	Myotis_lucifugus
ENSTTRG00000001555	RPUSD4	68	82.283	ENSMLUG00000029348	-	100	82.283	Myotis_lucifugus
ENSTTRG00000001555	RPUSD4	99	80.914	ENSNGAG00000020847	Rpusd4	99	80.914	Nannospalax_galili
ENSTTRG00000001555	RPUSD4	86	51.829	ENSNBRG00000005207	rpusd4	95	51.829	Neolamprologus_brichardi
ENSTTRG00000001555	RPUSD4	100	80.106	ENSNLEG00000007465	RPUSD4	100	80.106	Nomascus_leucogenys
ENSTTRG00000001555	RPUSD4	98	67.838	ENSMEUG00000004370	RPUSD4	99	67.838	Notamacropus_eugenii
ENSTTRG00000001555	RPUSD4	70	61.742	ENSOPRG00000013141	-	100	61.742	Ochotona_princeps
ENSTTRG00000001555	RPUSD4	100	80.371	ENSODEG00000004577	RPUSD4	100	80.371	Octodon_degus
ENSTTRG00000001555	RPUSD4	89	50.737	ENSONIG00000018879	rpusd4	91	50.737	Oreochromis_niloticus
ENSTTRG00000001555	RPUSD4	77	66.441	ENSOANG00000007247	RPUSD4	95	66.330	Ornithorhynchus_anatinus
ENSTTRG00000001555	RPUSD4	100	80.371	ENSOCUG00000017039	RPUSD4	100	80.371	Oryctolagus_cuniculus
ENSTTRG00000001555	RPUSD4	91	49.568	ENSORLG00000002750	rpusd4	94	49.425	Oryzias_latipes
ENSTTRG00000001555	RPUSD4	88	50.148	ENSORLG00020002044	rpusd4	83	50.148	Oryzias_latipes_hni
ENSTTRG00000001555	RPUSD4	90	48.725	ENSORLG00015020034	rpusd4	83	50.148	Oryzias_latipes_hsok
ENSTTRG00000001555	RPUSD4	85	52.012	ENSOMEG00000004861	rpusd4	79	52.012	Oryzias_melastigma
ENSTTRG00000001555	RPUSD4	100	79.365	ENSOGAG00000008922	RPUSD4	100	79.365	Otolemur_garnettii
ENSTTRG00000001555	RPUSD4	98	85.637	ENSOARG00000012238	RPUSD4	99	84.615	Ovis_aries
ENSTTRG00000001555	RPUSD4	100	80.371	ENSPPAG00000042883	RPUSD4	93	80.371	Pan_paniscus
ENSTTRG00000001555	RPUSD4	100	82.228	ENSPPRG00000003081	RPUSD4	100	82.228	Panthera_pardus
ENSTTRG00000001555	RPUSD4	100	82.228	ENSPTIG00000012059	RPUSD4	100	82.228	Panthera_tigris_altaica
ENSTTRG00000001555	RPUSD4	100	80.106	ENSPTRG00000004454	RPUSD4	100	80.106	Pan_troglodytes
ENSTTRG00000001555	RPUSD4	100	80.371	ENSPANG00000015040	RPUSD4	100	80.371	Papio_anubis
ENSTTRG00000001555	RPUSD4	89	56.677	ENSPKIG00000023986	rpusd4	86	56.677	Paramormyrops_kingsleyae
ENSTTRG00000001555	RPUSD4	79	64.333	ENSPSIG00000014268	RPUSD4	95	64.333	Pelodiscus_sinensis
ENSTTRG00000001555	RPUSD4	84	50.000	ENSPMGG00000002806	rpusd4	89	49.845	Periophthalmus_magnuspinnatus
ENSTTRG00000001555	RPUSD4	100	71.353	ENSPEMG00000000278	Rpusd4	100	71.353	Peromyscus_maniculatus_bairdii
ENSTTRG00000001555	RPUSD4	81	46.131	ENSPMAG00000008183	rpusd4	97	44.643	Petromyzon_marinus
ENSTTRG00000001555	RPUSD4	97	69.231	ENSPCIG00000010212	RPUSD4	100	69.231	Phascolarctos_cinereus
ENSTTRG00000001555	RPUSD4	90	48.857	ENSPFOG00000019030	rpusd4	91	48.857	Poecilia_formosa
ENSTTRG00000001555	RPUSD4	90	49.138	ENSPLAG00000016848	rpusd4	88	49.138	Poecilia_latipinna
ENSTTRG00000001555	RPUSD4	85	49.846	ENSPMEG00000017534	rpusd4	82	49.846	Poecilia_mexicana
ENSTTRG00000001555	RPUSD4	87	48.968	ENSPREG00000005689	rpusd4	85	49.401	Poecilia_reticulata
ENSTTRG00000001555	RPUSD4	100	81.167	ENSPPYG00000004043	RPUSD4	100	81.167	Pongo_abelii
ENSTTRG00000001555	RPUSD4	80	78.261	ENSPCAG00000000753	RPUSD4	81	78.261	Procavia_capensis
ENSTTRG00000001555	RPUSD4	98	74.663	ENSPCOG00000020694	RPUSD4	100	74.663	Propithecus_coquereli
ENSTTRG00000001555	RPUSD4	100	83.289	ENSPVAG00000000988	RPUSD4	100	83.289	Pteropus_vampyrus
ENSTTRG00000001555	RPUSD4	86	50.915	ENSPNYG00000009652	rpusd4	84	50.915	Pundamilia_nyererei
ENSTTRG00000001555	RPUSD4	88	50.751	ENSPNAG00000012264	rpusd4	89	50.442	Pygocentrus_nattereri
ENSTTRG00000001555	RPUSD4	100	78.249	ENSRNOG00000011567	Rpusd4	100	78.249	Rattus_norvegicus
ENSTTRG00000001555	RPUSD4	100	80.106	ENSRBIG00000034842	RPUSD4	100	80.106	Rhinopithecus_bieti
ENSTTRG00000001555	RPUSD4	100	80.106	ENSRROG00000039753	RPUSD4	100	80.106	Rhinopithecus_roxellana
ENSTTRG00000001555	RPUSD4	98	78.976	ENSSBOG00000030413	RPUSD4	99	78.976	Saimiri_boliviensis_boliviensis
ENSTTRG00000001555	RPUSD4	80	72.425	ENSSHAG00000008304	RPUSD4	99	72.425	Sarcophilus_harrisii
ENSTTRG00000001555	RPUSD4	88	55.193	ENSSFOG00015006203	rpusd4	91	55.193	Scleropages_formosus
ENSTTRG00000001555	RPUSD4	90	50.877	ENSSMAG00000020978	rpusd4	88	51.343	Scophthalmus_maximus
ENSTTRG00000001555	RPUSD4	84	50.157	ENSSDUG00000013399	rpusd4	84	50.157	Seriola_dumerili
ENSTTRG00000001555	RPUSD4	84	49.843	ENSSLDG00000023507	rpusd4	84	49.843	Seriola_lalandi_dorsalis
ENSTTRG00000001555	RPUSD4	89	60.294	ENSSPUG00000001401	RPUSD4	94	60.882	Sphenodon_punctatus
ENSTTRG00000001555	RPUSD4	90	51.873	ENSSPAG00000012163	rpusd4	88	51.873	Stegastes_partitus
ENSTTRG00000001555	RPUSD4	100	87.766	ENSSSCG00000015233	RPUSD4	100	87.766	Sus_scrofa
ENSTTRG00000001555	RPUSD4	79	58.667	ENSTGUG00000000773	RPUSD4	100	58.667	Taeniopygia_guttata
ENSTTRG00000001555	RPUSD4	86	50.760	ENSTRUG00000012283	rpusd4	84	50.152	Takifugu_rubripes
ENSTTRG00000001555	RPUSD4	90	50.289	ENSTNIG00000014676	rpusd4	88	50.289	Tetraodon_nigroviridis
ENSTTRG00000001555	RPUSD4	100	83.024	ENSUMAG00000002219	RPUSD4	100	83.024	Ursus_maritimus
ENSTTRG00000001555	RPUSD4	70	86.364	ENSVPAG00000001066	RPUSD4	100	86.364	Vicugna_pacos
ENSTTRG00000001555	RPUSD4	100	81.217	ENSVVUG00000020101	RPUSD4	100	81.217	Vulpes_vulpes
ENSTTRG00000001555	RPUSD4	88	49.275	ENSXCOG00000004676	rpusd4	85	49.538	Xiphophorus_couchianus
ENSTTRG00000001555	RPUSD4	85	49.846	ENSXMAG00000023351	rpusd4	82	49.846	Xiphophorus_maculatus