EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000001735 (Gene tree)
Gene ID: -
Gene Symbol: GFM1
Alias: EFGM|EGF1|GFM|mtEF-G1
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 40898 bases
Position: chrGeneScaffold_2556:605044-645941
Accession: 13780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000001639	GTP_EFTU	PF00009.27	1.8e-63	1	1
ENSTTRP00000001639	GTP_EFTU_D2	PF03144.25	1.1e-16	1	1
ENSTTRP00000001639	EFG_IV	PF03764.18	1.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000001736	GFM1-201	2268	-	ENSTTRP00000001639	755 (aa)	-	UPI00018B8634

Gene Model

Click here to download ENSTTRG00000001735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000001735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000001735	GFM1	91	34.019	ENSTTRG00000005188	GFM2	91	34.156

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000001735	GFM1	97	92.391	ENSG00000168827	GFM1	100	100.000	Homo_sapiens
ENSTTRG00000001735	GFM1	87	80.547	ENSAPOG00000016489	gfm1	96	79.341	Acanthochromis_polyacanthus
ENSTTRG00000001735	GFM1	97	93.234	ENSAMEG00000013542	GFM1	100	92.216	Ailuropoda_melanoleuca
ENSTTRG00000001735	GFM1	95	76.217	ENSACIG00000014465	gfm1	93	76.217	Amphilophus_citrinellus
ENSTTRG00000001735	GFM1	94	80.505	ENSAOCG00000006023	gfm1	95	80.505	Amphiprion_ocellaris
ENSTTRG00000001735	GFM1	95	79.888	ENSAPEG00000024499	gfm1	99	79.888	Amphiprion_percula
ENSTTRG00000001735	GFM1	95	80.084	ENSATEG00000013789	gfm1	96	80.084	Anabas_testudineus
ENSTTRG00000001735	GFM1	95	83.310	ENSAPLG00000005022	GFM1	99	83.310	Anas_platyrhynchos
ENSTTRG00000001735	GFM1	95	83.705	ENSACAG00000006829	GFM1	97	83.705	Anolis_carolinensis
ENSTTRG00000001735	GFM1	100	90.237	ENSANAG00000035983	GFM1	98	92.234	Aotus_nancymaae
ENSTTRG00000001735	GFM1	95	82.033	ENSACLG00000016586	gfm1	99	79.698	Astatotilapia_calliptera
ENSTTRG00000001735	GFM1	100	77.543	ENSAMXG00000013435	gfm1	98	79.268	Astyanax_mexicanus
ENSTTRG00000001735	GFM1	100	95.112	ENSBTAG00000027795	GFM1	100	95.244	Bos_taurus
ENSTTRG00000001735	GFM1	96	55.027	WBGene00009246	gfm-1	99	54.752	Caenorhabditis_elegans
ENSTTRG00000001735	GFM1	100	91.161	ENSCJAG00000000363	GFM1	100	91.161	Callithrix_jacchus
ENSTTRG00000001735	GFM1	97	93.496	ENSCAFG00000009006	GFM1	100	94.675	Canis_familiaris
ENSTTRG00000001735	GFM1	97	93.911	ENSCAFG00020005878	GFM1	99	94.613	Canis_lupus_dingo
ENSTTRG00000001735	GFM1	100	95.112	ENSCHIG00000015220	GFM1	100	95.244	Capra_hircus
ENSTTRG00000001735	GFM1	100	92.744	ENSTSYG00000002013	GFM1	100	92.612	Carlito_syrichta
ENSTTRG00000001735	GFM1	97	80.108	ENSCAPG00000005699	GFM1	98	80.992	Cavia_aperea
ENSTTRG00000001735	GFM1	100	91.425	ENSCPOG00000001194	GFM1	100	91.293	Cavia_porcellus
ENSTTRG00000001735	GFM1	100	90.501	ENSCCAG00000025561	GFM1	100	90.501	Cebus_capucinus
ENSTTRG00000001735	GFM1	100	90.633	ENSCATG00000037622	GFM1	100	90.633	Cercocebus_atys
ENSTTRG00000001735	GFM1	98	90.958	ENSCLAG00000002503	GFM1	99	90.726	Chinchilla_lanigera
ENSTTRG00000001735	GFM1	100	90.633	ENSCSAG00000012162	GFM1	100	90.633	Chlorocebus_sabaeus
ENSTTRG00000001735	GFM1	100	82.299	ENSCHOG00000004867	GFM1	98	83.446	Choloepus_hoffmanni
ENSTTRG00000001735	GFM1	97	82.385	ENSCPBG00000018367	GFM1	98	82.385	Chrysemys_picta_bellii
ENSTTRG00000001735	GFM1	96	58.345	ENSCING00000011960	-	96	58.345	Ciona_intestinalis
ENSTTRG00000001735	GFM1	94	59.085	ENSCSAVG00000008514	-	99	59.085	Ciona_savignyi
ENSTTRG00000001735	GFM1	97	92.527	ENSCANG00000031714	GFM1	100	90.897	Colobus_angolensis_palliatus
ENSTTRG00000001735	GFM1	100	91.678	ENSCGRG00001022095	GFM1	98	93.225	Cricetulus_griseus_chok1gshd
ENSTTRG00000001735	GFM1	100	91.678	ENSCGRG00000012043	GFM1	98	93.225	Cricetulus_griseus_crigri
ENSTTRG00000001735	GFM1	95	76.602	ENSCSEG00000017088	gfm1	98	76.602	Cynoglossus_semilaevis
ENSTTRG00000001735	GFM1	95	82.361	ENSCVAG00000004126	gfm1	99	81.268	Cyprinodon_variegatus
ENSTTRG00000001735	GFM1	95	79.387	ENSDARG00000063624	gfm1	96	79.387	Danio_rerio
ENSTTRG00000001735	GFM1	54	92.176	ENSDNOG00000016385	-	100	92.176	Dasypus_novemcinctus
ENSTTRG00000001735	GFM1	100	87.995	ENSDORG00000014165	Gfm1	100	87.863	Dipodomys_ordii
ENSTTRG00000001735	GFM1	94	66.573	FBgn0263133	mEFG1	95	66.573	Drosophila_melanogaster
ENSTTRG00000001735	GFM1	97	82.051	ENSETEG00000019197	GFM1	98	82.075	Echinops_telfairi
ENSTTRG00000001735	GFM1	88	66.767	ENSEBUG00000012794	gfm1	99	66.767	Eptatretus_burgeri
ENSTTRG00000001735	GFM1	95	69.379	ENSEEUG00000000429	GFM1	99	69.379	Erinaceus_europaeus
ENSTTRG00000001735	GFM1	96	77.824	ENSELUG00000014728	gfm1	97	77.824	Esox_lucius
ENSTTRG00000001735	GFM1	97	94.452	ENSFCAG00000013291	GFM1	100	93.272	Felis_catus
ENSTTRG00000001735	GFM1	89	82.815	ENSFALG00000007619	GFM1	100	82.815	Ficedula_albicollis
ENSTTRG00000001735	GFM1	100	90.106	ENSFDAG00000016559	GFM1	100	90.106	Fukomys_damarensis
ENSTTRG00000001735	GFM1	95	81.476	ENSFHEG00000006091	gfm1	96	81.476	Fundulus_heteroclitus
ENSTTRG00000001735	GFM1	95	79.086	ENSGMOG00000010161	gfm1	99	79.086	Gadus_morhua
ENSTTRG00000001735	GFM1	96	81.931	ENSGALG00000009634	GFM1	98	81.931	Gallus_gallus
ENSTTRG00000001735	GFM1	95	82.033	ENSGAFG00000012527	gfm1	96	82.033	Gambusia_affinis
ENSTTRG00000001735	GFM1	96	78.759	ENSGACG00000009864	gfm1	97	78.759	Gasterosteus_aculeatus
ENSTTRG00000001735	GFM1	97	92.663	ENSGGOG00000003085	GFM1	100	91.029	Gorilla_gorilla
ENSTTRG00000001735	GFM1	95	82.173	ENSHBUG00000002120	gfm1	96	82.173	Haplochromis_burtoni
ENSTTRG00000001735	GFM1	100	90.633	ENSHGLG00000016855	GFM1	100	90.633	Heterocephalus_glaber_female
ENSTTRG00000001735	GFM1	100	90.633	ENSHGLG00100013049	GFM1	100	90.633	Heterocephalus_glaber_male
ENSTTRG00000001735	GFM1	99	77.926	ENSHCOG00000007638	gfm1	97	80.727	Hippocampus_comes
ENSTTRG00000001735	GFM1	96	79.862	ENSIPUG00000005873	gfm1	97	79.862	Ictalurus_punctatus
ENSTTRG00000001735	GFM1	97	92.818	ENSSTOG00000010150	GFM1	99	92.818	Ictidomys_tridecemlineatus
ENSTTRG00000001735	GFM1	100	91.149	ENSJJAG00000016447	Gfm1	100	91.149	Jaculus_jaculus
ENSTTRG00000001735	GFM1	95	78.969	ENSKMAG00000020768	gfm1	96	78.969	Kryptolebias_marmoratus
ENSTTRG00000001735	GFM1	93	80.314	ENSLBEG00000021315	gfm1	100	80.314	Labrus_bergylta
ENSTTRG00000001735	GFM1	96	80.301	ENSLACG00000012295	GFM1	99	80.301	Latimeria_chalumnae
ENSTTRG00000001735	GFM1	95	75.485	ENSLOCG00000003778	gfm1	99	75.485	Lepisosteus_oculatus
ENSTTRG00000001735	GFM1	97	90.773	ENSLAFG00000010945	GFM1	100	89.793	Loxodonta_africana
ENSTTRG00000001735	GFM1	100	91.161	ENSMFAG00000035731	GFM1	100	91.161	Macaca_fascicularis
ENSTTRG00000001735	GFM1	100	91.293	ENSMMUG00000004961	GFM1	100	91.293	Macaca_mulatta
ENSTTRG00000001735	GFM1	100	90.765	ENSMNEG00000033245	GFM1	100	90.765	Macaca_nemestrina
ENSTTRG00000001735	GFM1	96	91.034	ENSMLEG00000030908	GFM1	99	90.970	Mandrillus_leucophaeus
ENSTTRG00000001735	GFM1	95	81.476	ENSMAMG00000011760	gfm1	96	81.476	Mastacembelus_armatus
ENSTTRG00000001735	GFM1	95	82.173	ENSMZEG00005016639	gfm1	96	82.173	Maylandia_zebra
ENSTTRG00000001735	GFM1	95	82.173	ENSMGAG00000010641	GFM1	96	82.173	Meleagris_gallopavo
ENSTTRG00000001735	GFM1	98	93.289	ENSMAUG00000000611	Gfm1	98	93.902	Mesocricetus_auratus
ENSTTRG00000001735	GFM1	97	93.886	ENSMICG00000049086	GFM1	100	93.008	Microcebus_murinus
ENSTTRG00000001735	GFM1	100	91.942	ENSMOCG00000000465	Gfm1	98	93.360	Microtus_ochrogaster
ENSTTRG00000001735	GFM1	95	80.084	ENSMMOG00000012538	gfm1	97	80.084	Mola_mola
ENSTTRG00000001735	GFM1	97	85.695	ENSMODG00000015673	GFM1	99	85.695	Monodelphis_domestica
ENSTTRG00000001735	GFM1	94	80.532	ENSMALG00000012508	gfm1	95	80.532	Monopterus_albus
ENSTTRG00000001735	GFM1	100	90.753	MGP_CAROLIEiJ_G0025052	Gfm1	98	92.141	Mus_caroli
ENSTTRG00000001735	GFM1	100	90.753	ENSMUSG00000027774	Gfm1	98	92.141	Mus_musculus
ENSTTRG00000001735	GFM1	100	90.753	MGP_PahariEiJ_G0026495	Gfm1	98	92.141	Mus_pahari
ENSTTRG00000001735	GFM1	100	90.753	MGP_SPRETEiJ_G0025994	Gfm1	98	92.141	Mus_spretus
ENSTTRG00000001735	GFM1	100	92.084	ENSMPUG00000002859	GFM1	100	91.953	Mustela_putorius_furo
ENSTTRG00000001735	GFM1	100	93.668	ENSMLUG00000000452	GFM1	100	93.536	Myotis_lucifugus
ENSTTRG00000001735	GFM1	100	90.092	ENSNGAG00000012375	Gfm1	98	91.599	Nannospalax_galili
ENSTTRG00000001735	GFM1	96	81.129	ENSNBRG00000004631	gfm1	99	81.129	Neolamprologus_brichardi
ENSTTRG00000001735	GFM1	97	92.799	ENSNLEG00000004176	GFM1	100	91.161	Nomascus_leucogenys
ENSTTRG00000001735	GFM1	90	78.770	ENSMEUG00000007784	GFM1	99	78.770	Notamacropus_eugenii
ENSTTRG00000001735	GFM1	100	88.654	ENSOPRG00000009860	GFM1	98	91.221	Ochotona_princeps
ENSTTRG00000001735	GFM1	98	92.027	ENSODEG00000004316	GFM1	100	90.897	Octodon_degus
ENSTTRG00000001735	GFM1	95	82.173	ENSONIG00000003772	gfm1	96	82.173	Oreochromis_niloticus
ENSTTRG00000001735	GFM1	97	92.558	ENSOCUG00000013561	GFM1	98	92.558	Oryctolagus_cuniculus
ENSTTRG00000001735	GFM1	94	81.356	ENSORLG00000006487	gfm1	100	81.356	Oryzias_latipes
ENSTTRG00000001735	GFM1	95	81.198	ENSORLG00020003362	gfm1	96	81.198	Oryzias_latipes_hni
ENSTTRG00000001735	GFM1	95	80.780	ENSORLG00015005829	gfm1	96	80.780	Oryzias_latipes_hsok
ENSTTRG00000001735	GFM1	95	81.616	ENSOMEG00000012894	gfm1	96	81.616	Oryzias_melastigma
ENSTTRG00000001735	GFM1	100	92.348	ENSOGAG00000008298	GFM1	100	92.480	Otolemur_garnettii
ENSTTRG00000001735	GFM1	96	95.736	ENSOARG00000002409	GFM1	100	95.736	Ovis_aries
ENSTTRG00000001735	GFM1	97	92.663	ENSPPAG00000033881	GFM1	100	91.029	Pan_paniscus
ENSTTRG00000001735	GFM1	97	94.317	ENSPPRG00000009281	GFM1	100	93.140	Panthera_pardus
ENSTTRG00000001735	GFM1	97	94.181	ENSPTIG00000012416	GFM1	100	93.008	Panthera_tigris_altaica
ENSTTRG00000001735	GFM1	97	92.663	ENSPTRG00000015570	GFM1	100	91.029	Pan_troglodytes
ENSTTRG00000001735	GFM1	100	90.897	ENSPANG00000016512	GFM1	100	90.897	Papio_anubis
ENSTTRG00000001735	GFM1	95	80.335	ENSPKIG00000004876	gfm1	96	80.335	Paramormyrops_kingsleyae
ENSTTRG00000001735	GFM1	97	82.065	ENSPSIG00000012567	GFM1	98	82.065	Pelodiscus_sinensis
ENSTTRG00000001735	GFM1	95	79.028	ENSPMGG00000014068	gfm1	99	79.028	Periophthalmus_magnuspinnatus
ENSTTRG00000001735	GFM1	100	92.074	ENSPEMG00000008942	Gfm1	98	93.496	Peromyscus_maniculatus_bairdii
ENSTTRG00000001735	GFM1	84	84.700	ENSPCIG00000020195	GFM1	96	86.808	Phascolarctos_cinereus
ENSTTRG00000001735	GFM1	95	82.591	ENSPFOG00000011022	gfm1	96	82.591	Poecilia_formosa
ENSTTRG00000001735	GFM1	95	82.312	ENSPLAG00000019585	gfm1	96	81.672	Poecilia_latipinna
ENSTTRG00000001735	GFM1	95	82.451	ENSPMEG00000012376	gfm1	96	82.451	Poecilia_mexicana
ENSTTRG00000001735	GFM1	95	82.173	ENSPREG00000001332	gfm1	91	82.173	Poecilia_reticulata
ENSTTRG00000001735	GFM1	97	92.663	ENSPPYG00000014244	GFM1	100	91.029	Pongo_abelii
ENSTTRG00000001735	GFM1	93	88.478	ENSPCAG00000008934	GFM1	100	88.478	Procavia_capensis
ENSTTRG00000001735	GFM1	97	94.293	ENSPCOG00000022259	GFM1	100	93.404	Propithecus_coquereli
ENSTTRG00000001735	GFM1	100	92.612	ENSPVAG00000013605	GFM1	100	92.612	Pteropus_vampyrus
ENSTTRG00000001735	GFM1	95	81.894	ENSPNYG00000006037	gfm1	99	80.491	Pundamilia_nyererei
ENSTTRG00000001735	GFM1	100	77.543	ENSPNAG00000001237	gfm1	97	80.362	Pygocentrus_nattereri
ENSTTRG00000001735	GFM1	100	90.489	ENSRNOG00000012873	Gfm1	98	92.141	Rattus_norvegicus
ENSTTRG00000001735	GFM1	97	92.391	ENSRBIG00000031363	GFM1	100	90.765	Rhinopithecus_bieti
ENSTTRG00000001735	GFM1	97	92.527	ENSRROG00000031081	GFM1	100	90.897	Rhinopithecus_roxellana
ENSTTRG00000001735	GFM1	91	55.844	YLR069C	-	90	55.844	Saccharomyces_cerevisiae
ENSTTRG00000001735	GFM1	100	91.029	ENSSBOG00000023252	GFM1	100	91.029	Saimiri_boliviensis_boliviensis
ENSTTRG00000001735	GFM1	97	87.619	ENSSHAG00000017772	GFM1	98	87.619	Sarcophilus_harrisii
ENSTTRG00000001735	GFM1	96	80.274	ENSSFOG00015003117	gfm1	99	80.274	Scleropages_formosus
ENSTTRG00000001735	GFM1	99	77.510	ENSSMAG00000013221	gfm1	96	79.387	Scophthalmus_maximus
ENSTTRG00000001735	GFM1	95	80.223	ENSSDUG00000018665	gfm1	96	80.223	Seriola_dumerili
ENSTTRG00000001735	GFM1	95	80.223	ENSSLDG00000020606	gfm1	96	80.223	Seriola_lalandi_dorsalis
ENSTTRG00000001735	GFM1	95	81.337	ENSSPUG00000018686	GFM1	97	81.337	Sphenodon_punctatus
ENSTTRG00000001735	GFM1	95	80.362	ENSSPAG00000008800	gfm1	96	80.362	Stegastes_partitus
ENSTTRG00000001735	GFM1	100	94.320	ENSSSCG00000025651	GFM1	100	94.188	Sus_scrofa
ENSTTRG00000001735	GFM1	100	77.015	ENSTRUG00000009244	gfm1	96	80.223	Takifugu_rubripes
ENSTTRG00000001735	GFM1	95	81.058	ENSTNIG00000007729	gfm1	96	81.058	Tetraodon_nigroviridis
ENSTTRG00000001735	GFM1	89	82.667	ENSTBEG00000017404	GFM1	89	82.667	Tupaia_belangeri
ENSTTRG00000001735	GFM1	97	93.775	ENSUAMG00000026381	GFM1	100	92.744	Ursus_americanus
ENSTTRG00000001735	GFM1	97	93.640	ENSUMAG00000011268	GFM1	100	92.612	Ursus_maritimus
ENSTTRG00000001735	GFM1	100	90.489	ENSVPAG00000009444	GFM1	100	90.621	Vicugna_pacos
ENSTTRG00000001735	GFM1	96	94.207	ENSVVUG00000020091	GFM1	100	94.231	Vulpes_vulpes
ENSTTRG00000001735	GFM1	100	80.921	ENSXETG00000032551	GFM1	97	83.402	Xenopus_tropicalis
ENSTTRG00000001735	GFM1	51	80.879	ENSXCOG00000012590	gfm1	89	80.879	Xiphophorus_couchianus
ENSTTRG00000001735	GFM1	95	82.033	ENSXMAG00000000261	gfm1	96	82.033	Xiphophorus_maculatus