EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000001937 (Gene tree)
Gene ID: -
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 16888 bases
Position: chrGeneScaffold_2770:21952-38839
Accession: 2324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000001821	CPSF_A	PF03178.15	3.8e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000001939	CPSF1-201	4329	-	ENSTTRP00000001821	1442 (aa)	-	UPI00018B59F6

Gene Model

Click here to download ENSTTRG00000001937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000001937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000001937	CPSF1	90	96.718	ENSG00000071894	CPSF1	100	88.426	Homo_sapiens
ENSTTRG00000001937	CPSF1	90	84.310	ENSAPOG00000019621	cpsf1	90	84.310	Acanthochromis_polyacanthus
ENSTTRG00000001937	CPSF1	87	93.955	ENSAMEG00000005557	CPSF1	89	93.955	Ailuropoda_melanoleuca
ENSTTRG00000001937	CPSF1	90	80.517	ENSACIG00000006112	cpsf1	89	80.690	Amphilophus_citrinellus
ENSTTRG00000001937	CPSF1	90	83.966	ENSAOCG00000007120	cpsf1	90	84.138	Amphiprion_ocellaris
ENSTTRG00000001937	CPSF1	90	83.966	ENSAPEG00000005755	cpsf1	90	84.138	Amphiprion_percula
ENSTTRG00000001937	CPSF1	90	83.621	ENSATEG00000011097	cpsf1	90	83.793	Anabas_testudineus
ENSTTRG00000001937	CPSF1	83	81.354	ENSACAG00000009655	CPSF1	89	81.354	Anolis_carolinensis
ENSTTRG00000001937	CPSF1	90	96.546	ENSANAG00000036514	CPSF1	90	96.546	Aotus_nancymaae
ENSTTRG00000001937	CPSF1	88	85.299	ENSACLG00000012231	cpsf1	89	85.481	Astatotilapia_calliptera
ENSTTRG00000001937	CPSF1	84	80.000	ENSAMXG00000008485	cpsf1	86	80.000	Astyanax_mexicanus
ENSTTRG00000001937	CPSF1	90	92.881	ENSBTAG00000008355	CPSF1	90	92.881	Bos_taurus
ENSTTRG00000001937	CPSF1	87	36.581	WBGene00022301	cpsf-1	100	39.888	Caenorhabditis_elegans
ENSTTRG00000001937	CPSF1	90	96.546	ENSCJAG00000021421	CPSF1	90	96.546	Callithrix_jacchus
ENSTTRG00000001937	CPSF1	87	97.927	ENSCAFG00000001600	CPSF1	90	97.927	Canis_familiaris
ENSTTRG00000001937	CPSF1	90	97.927	ENSCAFG00020020821	CPSF1	90	97.927	Canis_lupus_dingo
ENSTTRG00000001937	CPSF1	90	92.500	ENSCHIG00000015833	CPSF1	90	92.500	Capra_hircus
ENSTTRG00000001937	CPSF1	90	97.409	ENSTSYG00000028560	CPSF1	100	89.815	Carlito_syrichta
ENSTTRG00000001937	CPSF1	86	97.064	ENSCAPG00000014921	CPSF1	89	97.064	Cavia_aperea
ENSTTRG00000001937	CPSF1	90	97.064	ENSCPOG00000011448	CPSF1	90	97.064	Cavia_porcellus
ENSTTRG00000001937	CPSF1	90	96.718	ENSCCAG00000037658	CPSF1	100	88.532	Cebus_capucinus
ENSTTRG00000001937	CPSF1	90	96.546	ENSCATG00000037234	CPSF1	100	88.426	Cercocebus_atys
ENSTTRG00000001937	CPSF1	90	97.237	ENSCLAG00000012166	CPSF1	90	97.237	Chinchilla_lanigera
ENSTTRG00000001937	CPSF1	90	96.546	ENSCSAG00000008502	CPSF1	90	96.546	Chlorocebus_sabaeus
ENSTTRG00000001937	CPSF1	89	89.204	ENSCPBG00000018910	CPSF1	86	89.204	Chrysemys_picta_bellii
ENSTTRG00000001937	CPSF1	85	50.097	ENSCING00000000514	-	88	49.807	Ciona_intestinalis
ENSTTRG00000001937	CPSF1	89	50.519	ENSCSAVG00000002293	-	99	49.302	Ciona_savignyi
ENSTTRG00000001937	CPSF1	87	93.610	ENSCANG00000032760	CPSF1	100	88.889	Colobus_angolensis_palliatus
ENSTTRG00000001937	CPSF1	90	97.064	ENSCGRG00001016344	Cpsf1	90	97.064	Cricetulus_griseus_chok1gshd
ENSTTRG00000001937	CPSF1	90	97.064	ENSCGRG00000003118	Cpsf1	90	97.064	Cricetulus_griseus_crigri
ENSTTRG00000001937	CPSF1	90	82.556	ENSCSEG00000013464	cpsf1	89	82.556	Cynoglossus_semilaevis
ENSTTRG00000001937	CPSF1	74	82.087	ENSCVAG00000014059	cpsf1	100	75.000	Cyprinodon_variegatus
ENSTTRG00000001937	CPSF1	89	83.304	ENSDARG00000034178	cpsf1	89	83.304	Danio_rerio
ENSTTRG00000001937	CPSF1	52	95.273	ENSDNOG00000043654	CPSF1	87	95.273	Dasypus_novemcinctus
ENSTTRG00000001937	CPSF1	87	96.891	ENSDORG00000006278	Cpsf1	89	96.891	Dipodomys_ordii
ENSTTRG00000001937	CPSF1	89	47.826	FBgn0024698	Cpsf160	88	47.917	Drosophila_melanogaster
ENSTTRG00000001937	CPSF1	70	98.658	ENSETEG00000006022	CPSF1	72	98.658	Echinops_telfairi
ENSTTRG00000001937	CPSF1	90	97.927	ENSEASG00005010774	CPSF1	90	97.927	Equus_asinus_asinus
ENSTTRG00000001937	CPSF1	90	97.927	ENSECAG00000022209	CPSF1	90	97.927	Equus_caballus
ENSTTRG00000001937	CPSF1	90	95.337	ENSEEUG00000000471	CPSF1	90	95.337	Erinaceus_europaeus
ENSTTRG00000001937	CPSF1	90	83.705	ENSELUG00000012271	cpsf1	89	83.705	Esox_lucius
ENSTTRG00000001937	CPSF1	90	97.409	ENSFDAG00000016060	CPSF1	90	97.409	Fukomys_damarensis
ENSTTRG00000001937	CPSF1	89	81.597	ENSFHEG00000016801	cpsf1	89	81.771	Fundulus_heteroclitus
ENSTTRG00000001937	CPSF1	90	82.069	ENSGMOG00000000796	cpsf1	89	82.069	Gadus_morhua
ENSTTRG00000001937	CPSF1	85	83.929	ENSGAFG00000018890	cpsf1	88	83.929	Gambusia_affinis
ENSTTRG00000001937	CPSF1	90	82.759	ENSGACG00000008703	cpsf1	90	82.931	Gasterosteus_aculeatus
ENSTTRG00000001937	CPSF1	90	83.218	ENSGAGG00000004276	CPSF1	86	89.409	Gopherus_agassizii
ENSTTRG00000001937	CPSF1	90	96.718	ENSGGOG00000016185	CPSF1	100	88.426	Gorilla_gorilla
ENSTTRG00000001937	CPSF1	90	83.966	ENSHBUG00000018900	cpsf1	89	84.138	Haplochromis_burtoni
ENSTTRG00000001937	CPSF1	90	97.237	ENSHGLG00000016139	CPSF1	90	97.237	Heterocephalus_glaber_female
ENSTTRG00000001937	CPSF1	90	97.064	ENSHGLG00100009750	CPSF1	90	97.064	Heterocephalus_glaber_male
ENSTTRG00000001937	CPSF1	90	82.383	ENSHCOG00000018509	cpsf1	90	82.383	Hippocampus_comes
ENSTTRG00000001937	CPSF1	90	76.724	ENSIPUG00000011259	cpsf1	90	76.724	Ictalurus_punctatus
ENSTTRG00000001937	CPSF1	86	97.409	ENSSTOG00000009957	CPSF1	89	97.409	Ictidomys_tridecemlineatus
ENSTTRG00000001937	CPSF1	90	96.718	ENSJJAG00000023002	Cpsf1	90	96.718	Jaculus_jaculus
ENSTTRG00000001937	CPSF1	81	85.266	ENSKMAG00000001940	cpsf1	89	85.266	Kryptolebias_marmoratus
ENSTTRG00000001937	CPSF1	90	83.276	ENSLBEG00000003601	cpsf1	90	83.448	Labrus_bergylta
ENSTTRG00000001937	CPSF1	77	85.838	ENSLACG00000000233	CPSF1	89	85.838	Latimeria_chalumnae
ENSTTRG00000001937	CPSF1	90	85.739	ENSLOCG00000008484	cpsf1	89	86.426	Lepisosteus_oculatus
ENSTTRG00000001937	CPSF1	86	96.891	ENSLAFG00000022601	CPSF1	89	96.891	Loxodonta_africana
ENSTTRG00000001937	CPSF1	90	96.546	ENSMFAG00000037013	CPSF1	100	88.426	Macaca_fascicularis
ENSTTRG00000001937	CPSF1	90	96.546	ENSMMUG00000007380	CPSF1	100	88.426	Macaca_mulatta
ENSTTRG00000001937	CPSF1	86	96.546	ENSMNEG00000043564	CPSF1	100	88.426	Macaca_nemestrina
ENSTTRG00000001937	CPSF1	90	96.546	ENSMLEG00000043010	CPSF1	100	88.426	Mandrillus_leucophaeus
ENSTTRG00000001937	CPSF1	90	84.483	ENSMAMG00000003803	cpsf1	90	84.655	Mastacembelus_armatus
ENSTTRG00000001937	CPSF1	88	85.299	ENSMZEG00005001168	cpsf1	89	85.481	Maylandia_zebra
ENSTTRG00000001937	CPSF1	90	97.064	ENSMAUG00000003601	Cpsf1	90	97.064	Mesocricetus_auratus
ENSTTRG00000001937	CPSF1	90	98.100	ENSMICG00000015767	CPSF1	90	98.100	Microcebus_murinus
ENSTTRG00000001937	CPSF1	90	97.064	ENSMOCG00000022758	Cpsf1	90	97.064	Microtus_ochrogaster
ENSTTRG00000001937	CPSF1	90	83.276	ENSMMOG00000021245	cpsf1	89	83.448	Mola_mola
ENSTTRG00000001937	CPSF1	90	96.546	ENSMODG00000010755	CPSF1	90	96.546	Monodelphis_domestica
ENSTTRG00000001937	CPSF1	90	83.621	ENSMALG00000020545	cpsf1	90	83.793	Monopterus_albus
ENSTTRG00000001937	CPSF1	90	97.237	MGP_CAROLIEiJ_G0019936	Cpsf1	90	97.237	Mus_caroli
ENSTTRG00000001937	CPSF1	90	97.237	ENSMUSG00000034022	Cpsf1	90	97.237	Mus_musculus
ENSTTRG00000001937	CPSF1	90	97.237	MGP_PahariEiJ_G0019946	Cpsf1	90	97.237	Mus_pahari
ENSTTRG00000001937	CPSF1	90	97.237	MGP_SPRETEiJ_G0020839	Cpsf1	90	97.237	Mus_spretus
ENSTTRG00000001937	CPSF1	83	96.814	ENSMPUG00000006419	CPSF1	83	96.814	Mustela_putorius_furo
ENSTTRG00000001937	CPSF1	90	97.237	ENSNGAG00000022460	Cpsf1	90	97.237	Nannospalax_galili
ENSTTRG00000001937	CPSF1	90	79.239	ENSNBRG00000000813	cpsf1	89	79.066	Neolamprologus_brichardi
ENSTTRG00000001937	CPSF1	76	89.542	ENSNLEG00000010633	-	100	88.426	Nomascus_leucogenys
ENSTTRG00000001937	CPSF1	72	98.256	ENSMEUG00000014922	CPSF1	74	98.256	Notamacropus_eugenii
ENSTTRG00000001937	CPSF1	56	97.449	ENSOPRG00000004693	-	65	97.449	Ochotona_princeps
ENSTTRG00000001937	CPSF1	90	97.237	ENSODEG00000013995	CPSF1	90	97.237	Octodon_degus
ENSTTRG00000001937	CPSF1	90	83.621	ENSONIG00000007676	cpsf1	90	83.793	Oreochromis_niloticus
ENSTTRG00000001937	CPSF1	90	83.103	ENSORLG00000013544	cpsf1	92	86.831	Oryzias_latipes
ENSTTRG00000001937	CPSF1	90	82.931	ENSORLG00020021693	cpsf1	92	86.831	Oryzias_latipes_hni
ENSTTRG00000001937	CPSF1	90	82.931	ENSORLG00015009979	cpsf1	89	82.586	Oryzias_latipes_hsok
ENSTTRG00000001937	CPSF1	90	81.897	ENSOMEG00000011849	cpsf1	89	82.069	Oryzias_melastigma
ENSTTRG00000001937	CPSF1	90	97.927	ENSOGAG00000000315	CPSF1	90	97.927	Otolemur_garnettii
ENSTTRG00000001937	CPSF1	90	96.718	ENSPPAG00000019280	CPSF1	100	89.593	Pan_paniscus
ENSTTRG00000001937	CPSF1	90	92.715	ENSPTRG00000051253	-	100	89.593	Pan_troglodytes
ENSTTRG00000001937	CPSF1	90	96.718	ENSPTRG00000049288	-	100	89.593	Pan_troglodytes
ENSTTRG00000001937	CPSF1	86	96.546	ENSPANG00000015005	CPSF1	100	88.426	Papio_anubis
ENSTTRG00000001937	CPSF1	90	84.682	ENSPKIG00000002582	cpsf1	89	84.854	Paramormyrops_kingsleyae
ENSTTRG00000001937	CPSF1	90	96.546	ENSPCIG00000009035	CPSF1	90	96.546	Phascolarctos_cinereus
ENSTTRG00000001937	CPSF1	89	82.118	ENSPFOG00000012870	cpsf1	89	82.118	Poecilia_formosa
ENSTTRG00000001937	CPSF1	89	81.771	ENSPREG00000016307	cpsf1	89	81.944	Poecilia_reticulata
ENSTTRG00000001937	CPSF1	90	89.119	ENSPPYG00000018973	CPSF1	89	89.119	Pongo_abelii
ENSTTRG00000001937	CPSF1	81	95.170	ENSPCAG00000011541	CPSF1	83	95.170	Procavia_capensis
ENSTTRG00000001937	CPSF1	90	90.278	ENSPCOG00000020001	CPSF1	100	90.278	Propithecus_coquereli
ENSTTRG00000001937	CPSF1	80	99.143	ENSPVAG00000006761	CPSF1	81	99.143	Pteropus_vampyrus
ENSTTRG00000001937	CPSF1	90	83.966	ENSPNYG00000004906	cpsf1	90	84.138	Pundamilia_nyererei
ENSTTRG00000001937	CPSF1	90	76.990	ENSPNAG00000024395	cpsf1	89	76.990	Pygocentrus_nattereri
ENSTTRG00000001937	CPSF1	90	97.064	ENSRNOG00000030705	Cpsf1	90	97.064	Rattus_norvegicus
ENSTTRG00000001937	CPSF1	90	96.546	ENSRBIG00000044907	CPSF1	100	88.889	Rhinopithecus_bieti
ENSTTRG00000001937	CPSF1	90	96.546	ENSRROG00000044861	CPSF1	100	88.889	Rhinopithecus_roxellana
ENSTTRG00000001937	CPSF1	86	96.891	ENSSBOG00000027177	CPSF1	89	96.891	Saimiri_boliviensis_boliviensis
ENSTTRG00000001937	CPSF1	90	96.718	ENSSHAG00000006500	CPSF1	90	96.718	Sarcophilus_harrisii
ENSTTRG00000001937	CPSF1	90	84.165	ENSSFOG00015004606	cpsf1	90	84.337	Scleropages_formosus
ENSTTRG00000001937	CPSF1	90	84.337	ENSSMAG00000020547	cpsf1	90	84.165	Scophthalmus_maximus
ENSTTRG00000001937	CPSF1	90	83.793	ENSSDUG00000001100	cpsf1	89	83.966	Seriola_dumerili
ENSTTRG00000001937	CPSF1	90	83.621	ENSSLDG00000003619	cpsf1	89	83.793	Seriola_lalandi_dorsalis
ENSTTRG00000001937	CPSF1	79	97.917	ENSSARG00000003643	CPSF1	81	97.917	Sorex_araneus
ENSTTRG00000001937	CPSF1	85	90.155	ENSSPUG00000014396	CPSF1	100	83.796	Sphenodon_punctatus
ENSTTRG00000001937	CPSF1	90	83.621	ENSSPAG00000005349	cpsf1	90	83.621	Stegastes_partitus
ENSTTRG00000001937	CPSF1	90	97.237	ENSSSCG00000005906	CPSF1	90	97.237	Sus_scrofa
ENSTTRG00000001937	CPSF1	85	82.931	ENSTRUG00000013134	cpsf1	89	82.931	Takifugu_rubripes
ENSTTRG00000001937	CPSF1	90	83.162	ENSTNIG00000014027	cpsf1	89	83.333	Tetraodon_nigroviridis
ENSTTRG00000001937	CPSF1	67	84.848	ENSTBEG00000001756	CPSF1	79	84.848	Tupaia_belangeri
ENSTTRG00000001937	CPSF1	87	97.927	ENSUAMG00000006476	CPSF1	88	97.927	Ursus_americanus
ENSTTRG00000001937	CPSF1	89	82.118	ENSXCOG00000003608	cpsf1	89	82.292	Xiphophorus_couchianus
ENSTTRG00000001937	CPSF1	89	82.292	ENSXMAG00000005798	cpsf1	89	82.465	Xiphophorus_maculatus