EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000002008 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 94188 bases
Position: chrGeneScaffold_437:19786-113973
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000001884	Ago_hook	PF10427.9	5.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000002008	TNRC6A-201	5868	-	ENSTTRP00000001884	1955 (aa)	-	UPI00018B590A

Gene Model

Click here to download ENSTTRG00000002008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000002008's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000002008	TNRC6A	81	46.791	ENSTTRG00000010828	TNRC6C	91	47.831
ENSTTRG00000002008	TNRC6A	83	40.484	ENSTTRG00000011465	TNRC6B	89	42.332

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000002008	TNRC6A	93	98.058	ENSG00000090905	TNRC6A	100	95.000	Homo_sapiens
ENSTTRG00000002008	TNRC6A	90	97.950	ENSAMEG00000009333	TNRC6A	94	97.950	Ailuropoda_melanoleuca
ENSTTRG00000002008	TNRC6A	90	87.634	ENSAPLG00000009978	TNRC6A	94	87.634	Anas_platyrhynchos
ENSTTRG00000002008	TNRC6A	89	66.070	ENSACAG00000011857	TNRC6A	91	68.114	Anolis_carolinensis
ENSTTRG00000002008	TNRC6A	93	97.950	ENSANAG00000025252	TNRC6A	94	97.950	Aotus_nancymaae
ENSTTRG00000002008	TNRC6A	83	63.501	ENSAMXG00000019919	tnrc6a	91	62.222	Astyanax_mexicanus
ENSTTRG00000002008	TNRC6A	90	97.950	ENSBTAG00000017999	TNRC6A	92	97.950	Bos_taurus
ENSTTRG00000002008	TNRC6A	93	97.843	ENSCJAG00000020677	TNRC6A	94	97.843	Callithrix_jacchus
ENSTTRG00000002008	TNRC6A	93	98.274	ENSCAFG00000017531	TNRC6A	94	98.274	Canis_familiaris
ENSTTRG00000002008	TNRC6A	90	96.009	ENSCAFG00020021160	TNRC6A	92	96.009	Canis_lupus_dingo
ENSTTRG00000002008	TNRC6A	93	92.233	ENSCHIG00000019448	TNRC6A	90	95.365	Capra_hircus
ENSTTRG00000002008	TNRC6A	93	98.274	ENSTSYG00000012711	TNRC6A	94	98.274	Carlito_syrichta
ENSTTRG00000002008	TNRC6A	93	92.341	ENSCPOG00000036684	TNRC6A	93	92.341	Cavia_porcellus
ENSTTRG00000002008	TNRC6A	93	97.950	ENSCCAG00000033664	TNRC6A	94	97.950	Cebus_capucinus
ENSTTRG00000002008	TNRC6A	90	96.039	ENSCATG00000019284	TNRC6A	91	96.039	Cercocebus_atys
ENSTTRG00000002008	TNRC6A	93	88.242	ENSCLAG00000010217	TNRC6A	94	88.242	Chinchilla_lanigera
ENSTTRG00000002008	TNRC6A	93	98.058	ENSCSAG00000006561	TNRC6A	94	98.058	Chlorocebus_sabaeus
ENSTTRG00000002008	TNRC6A	89	91.148	ENSCHOG00000009374	TNRC6A	89	93.062	Choloepus_hoffmanni
ENSTTRG00000002008	TNRC6A	84	81.965	ENSCPBG00000001881	TNRC6A	92	81.965	Chrysemys_picta_bellii
ENSTTRG00000002008	TNRC6A	93	98.058	ENSCANG00000041549	TNRC6A	94	98.058	Colobus_angolensis_palliatus
ENSTTRG00000002008	TNRC6A	90	95.366	ENSCGRG00001015021	Tnrc6a	93	95.474	Cricetulus_griseus_chok1gshd
ENSTTRG00000002008	TNRC6A	93	89.116	ENSCGRG00000013351	Tnrc6a	93	89.224	Cricetulus_griseus_crigri
ENSTTRG00000002008	TNRC6A	83	64.271	ENSDARG00000079688	tnrc6a	91	63.953	Danio_rerio
ENSTTRG00000002008	TNRC6A	90	96.888	ENSDNOG00000013989	TNRC6A	92	96.888	Dasypus_novemcinctus
ENSTTRG00000002008	TNRC6A	90	88.967	ENSETEG00000014658	TNRC6A	94	90.035	Echinops_telfairi
ENSTTRG00000002008	TNRC6A	93	97.737	ENSEASG00005017693	TNRC6A	94	97.737	Equus_asinus_asinus
ENSTTRG00000002008	TNRC6A	93	97.629	ENSECAG00000025056	TNRC6A	94	97.629	Equus_caballus
ENSTTRG00000002008	TNRC6A	90	88.457	ENSEEUG00000004530	TNRC6A	93	88.644	Erinaceus_europaeus
ENSTTRG00000002008	TNRC6A	93	97.411	ENSFCAG00000025236	TNRC6A	94	97.411	Felis_catus
ENSTTRG00000002008	TNRC6A	91	87.458	ENSFALG00000003757	TNRC6A	93	86.624	Ficedula_albicollis
ENSTTRG00000002008	TNRC6A	83	82.328	ENSGALG00000006068	TNRC6A	93	82.543	Gallus_gallus
ENSTTRG00000002008	TNRC6A	83	81.672	ENSGAGG00000023209	TNRC6A	92	81.672	Gopherus_agassizii
ENSTTRG00000002008	TNRC6A	90	97.950	ENSGGOG00000005137	TNRC6A	93	97.950	Gorilla_gorilla
ENSTTRG00000002008	TNRC6A	87	74.871	ENSHGLG00000007368	-	88	75.000	Heterocephalus_glaber_female
ENSTTRG00000002008	TNRC6A	92	89.644	ENSHGLG00000012474	-	93	89.644	Heterocephalus_glaber_female
ENSTTRG00000002008	TNRC6A	92	89.491	ENSHGLG00100012496	-	93	89.491	Heterocephalus_glaber_male
ENSTTRG00000002008	TNRC6A	93	98.166	ENSSTOG00000023394	TNRC6A	92	98.166	Ictidomys_tridecemlineatus
ENSTTRG00000002008	TNRC6A	90	74.549	ENSLACG00000006277	TNRC6A	93	75.398	Latimeria_chalumnae
ENSTTRG00000002008	TNRC6A	92	83.002	ENSLOCG00000005517	tnrc6a	86	83.002	Lepisosteus_oculatus
ENSTTRG00000002008	TNRC6A	90	92.344	ENSLAFG00000004209	TNRC6A	93	92.344	Loxodonta_africana
ENSTTRG00000002008	TNRC6A	90	96.039	ENSMFAG00000003824	TNRC6A	92	96.039	Macaca_fascicularis
ENSTTRG00000002008	TNRC6A	93	98.058	ENSMMUG00000020428	TNRC6A	94	98.058	Macaca_mulatta
ENSTTRG00000002008	TNRC6A	93	97.950	ENSMNEG00000034854	TNRC6A	94	97.950	Macaca_nemestrina
ENSTTRG00000002008	TNRC6A	90	95.931	ENSMLEG00000042737	TNRC6A	91	95.931	Mandrillus_leucophaeus
ENSTTRG00000002008	TNRC6A	92	86.924	ENSMGAG00000006455	TNRC6A	94	86.924	Meleagris_gallopavo
ENSTTRG00000002008	TNRC6A	93	90.517	ENSMAUG00000012750	Tnrc6a	93	90.625	Mesocricetus_auratus
ENSTTRG00000002008	TNRC6A	93	98.382	ENSMICG00000030685	TNRC6A	94	98.382	Microcebus_murinus
ENSTTRG00000002008	TNRC6A	93	91.370	ENSMOCG00000000152	Tnrc6a	93	91.370	Microtus_ochrogaster
ENSTTRG00000002008	TNRC6A	92	87.500	ENSMODG00000016348	TNRC6A	92	87.815	Monodelphis_domestica
ENSTTRG00000002008	TNRC6A	90	90.723	MGP_CAROLIEiJ_G0030425	Tnrc6a	91	95.901	Mus_caroli
ENSTTRG00000002008	TNRC6A	93	90.831	ENSMUSG00000052707	Tnrc6a	91	96.009	Mus_musculus
ENSTTRG00000002008	TNRC6A	90	91.046	MGP_PahariEiJ_G0013635	Tnrc6a	91	96.224	Mus_pahari
ENSTTRG00000002008	TNRC6A	93	95.901	MGP_SPRETEiJ_G0031539	Tnrc6a	94	95.901	Mus_spretus
ENSTTRG00000002008	TNRC6A	89	84.785	ENSMPUG00000012324	TNRC6A	92	84.785	Mustela_putorius_furo
ENSTTRG00000002008	TNRC6A	90	96.980	ENSMLUG00000002701	TNRC6A	93	96.980	Myotis_lucifugus
ENSTTRG00000002008	TNRC6A	93	92.449	ENSNGAG00000020702	Tnrc6a	93	92.449	Nannospalax_galili
ENSTTRG00000002008	TNRC6A	90	93.703	ENSNLEG00000011851	TNRC6A	92	93.597	Nomascus_leucogenys
ENSTTRG00000002008	TNRC6A	73	88.704	ENSMEUG00000015959	-	74	88.704	Notamacropus_eugenii
ENSTTRG00000002008	TNRC6A	88	97.761	ENSOPRG00000005819	TNRC6A	89	97.761	Ochotona_princeps
ENSTTRG00000002008	TNRC6A	90	85.816	ENSODEG00000012802	TNRC6A	91	87.723	Octodon_degus
ENSTTRG00000002008	TNRC6A	81	89.417	ENSOANG00000007672	TNRC6A	92	89.417	Ornithorhynchus_anatinus
ENSTTRG00000002008	TNRC6A	90	95.690	ENSOCUG00000004325	TNRC6A	93	95.690	Oryctolagus_cuniculus
ENSTTRG00000002008	TNRC6A	90	98.058	ENSOGAG00000006666	TNRC6A	92	98.058	Otolemur_garnettii
ENSTTRG00000002008	TNRC6A	90	97.535	ENSOARG00000017950	TNRC6A	92	97.535	Ovis_aries
ENSTTRG00000002008	TNRC6A	93	98.058	ENSPPAG00000028379	TNRC6A	94	98.058	Pan_paniscus
ENSTTRG00000002008	TNRC6A	93	97.303	ENSPPRG00000005861	TNRC6A	94	97.303	Panthera_pardus
ENSTTRG00000002008	TNRC6A	93	97.303	ENSPTIG00000006346	TNRC6A	94	97.303	Panthera_tigris_altaica
ENSTTRG00000002008	TNRC6A	90	97.950	ENSPTRG00000007898	TNRC6A	93	97.950	Pan_troglodytes
ENSTTRG00000002008	TNRC6A	93	93.096	ENSPANG00000018523	TNRC6A	94	93.096	Papio_anubis
ENSTTRG00000002008	TNRC6A	80	62.691	ENSPKIG00000012859	tnrc6a	90	76.355	Paramormyrops_kingsleyae
ENSTTRG00000002008	TNRC6A	71	75.294	ENSPSIG00000003965	TNRC6A	91	75.401	Pelodiscus_sinensis
ENSTTRG00000002008	TNRC6A	93	91.154	ENSPEMG00000016318	Tnrc6a	93	91.154	Peromyscus_maniculatus_bairdii
ENSTTRG00000002008	TNRC6A	90	90.497	ENSPCIG00000012106	TNRC6A	93	90.497	Phascolarctos_cinereus
ENSTTRG00000002008	TNRC6A	93	97.950	ENSPPYG00000007202	TNRC6A	94	97.950	Pongo_abelii
ENSTTRG00000002008	TNRC6A	89	95.876	ENSPCAG00000008260	TNRC6A	89	95.876	Procavia_capensis
ENSTTRG00000002008	TNRC6A	93	93.635	ENSPCOG00000010134	TNRC6A	94	93.635	Propithecus_coquereli
ENSTTRG00000002008	TNRC6A	82	78.940	ENSPVAG00000012066	TNRC6A	93	79.079	Pteropus_vampyrus
ENSTTRG00000002008	TNRC6A	90	95.761	ENSRNOG00000024737	Tnrc6a	91	95.761	Rattus_norvegicus
ENSTTRG00000002008	TNRC6A	90	98.058	ENSRBIG00000014222	TNRC6A	93	98.058	Rhinopithecus_bieti
ENSTTRG00000002008	TNRC6A	93	98.058	ENSRROG00000032360	TNRC6A	94	98.058	Rhinopithecus_roxellana
ENSTTRG00000002008	TNRC6A	90	97.843	ENSSBOG00000036197	TNRC6A	93	97.843	Saimiri_boliviensis_boliviensis
ENSTTRG00000002008	TNRC6A	83	82.458	ENSSHAG00000008811	TNRC6A	93	82.773	Sarcophilus_harrisii
ENSTTRG00000002008	TNRC6A	79	70.410	ENSSFOG00015008920	tnrc6a	90	69.607	Scleropages_formosus
ENSTTRG00000002008	TNRC6A	71	82.971	ENSSARG00000002479	TNRC6A	89	82.246	Sorex_araneus
ENSTTRG00000002008	TNRC6A	83	82.885	ENSSPUG00000010525	TNRC6A	93	82.885	Sphenodon_punctatus
ENSTTRG00000002008	TNRC6A	93	92.333	ENSSSCG00000038870	TNRC6A	93	98.942	Sus_scrofa
ENSTTRG00000002008	TNRC6A	93	81.142	ENSTGUG00000006142	TNRC6A	94	81.681	Taeniopygia_guttata
ENSTTRG00000002008	TNRC6A	90	92.988	ENSTBEG00000014965	TNRC6A	94	92.988	Tupaia_belangeri
ENSTTRG00000002008	TNRC6A	72	93.120	ENSUAMG00000006656	-	85	94.187	Ursus_americanus
ENSTTRG00000002008	TNRC6A	90	98.058	ENSUMAG00000008274	TNRC6A	93	98.058	Ursus_maritimus
ENSTTRG00000002008	TNRC6A	55	86.145	ENSVPAG00000010764	-	55	85.629	Vicugna_pacos
ENSTTRG00000002008	TNRC6A	90	98.166	ENSVVUG00000005380	TNRC6A	93	98.166	Vulpes_vulpes
ENSTTRG00000002008	TNRC6A	87	73.355	ENSXETG00000030437	TNRC6A	92	73.786	Xenopus_tropicalis