EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000002654 (Gene tree)
Gene ID: -
Gene Symbol: SNRPD1
Alias: HsT2456|SNRPD|Sm-D1
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 10604 bases
Position: chrscaffold_108782:201722-212325
Accession: 11158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000002486	LSM	PF01423.22	3.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000002650	SNRPD1-201	348	-	ENSTTRP00000002486	115 (aa)	-	UPI0000180311

Gene Model

Click here to download ENSTTRG00000002654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000002654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000002654	SNRPD1	100	100.000	ENSG00000167088	SNRPD1	100	100.000	Homo_sapiens
ENSTTRG00000002654	SNRPD1	100	96.522	ENSAPOG00000019446	snrpd1	63	96.522	Acanthochromis_polyacanthus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSAMEG00000002576	SNRPD1	98	100.000	Ailuropoda_melanoleuca
ENSTTRG00000002654	SNRPD1	97	96.429	ENSACIG00000011263	snrpd1	100	96.429	Amphilophus_citrinellus
ENSTTRG00000002654	SNRPD1	100	96.522	ENSAOCG00000007406	snrpd1	97	96.522	Amphiprion_ocellaris
ENSTTRG00000002654	SNRPD1	100	92.174	ENSAPEG00000014961	snrpd1	96	92.174	Amphiprion_percula
ENSTTRG00000002654	SNRPD1	97	96.429	ENSAPEG00000012539	SNRPD1	100	96.429	Amphiprion_percula
ENSTTRG00000002654	SNRPD1	100	96.522	ENSATEG00000014399	snrpd1	100	96.429	Anabas_testudineus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSAPLG00000012256	SNRPD1	97	100.000	Anas_platyrhynchos
ENSTTRG00000002654	SNRPD1	100	100.000	ENSACAG00000006364	SNRPD1	97	100.000	Anolis_carolinensis
ENSTTRG00000002654	SNRPD1	100	100.000	ENSANAG00000025641	SNRPD1	97	100.000	Aotus_nancymaae
ENSTTRG00000002654	SNRPD1	97	96.429	ENSACLG00000017406	snrpd1	100	96.429	Astatotilapia_calliptera
ENSTTRG00000002654	SNRPD1	100	97.391	ENSAMXG00000004589	snrpd1	97	97.391	Astyanax_mexicanus
ENSTTRG00000002654	SNRPD1	99	90.351	ENSBTAG00000055316	-	91	90.351	Bos_taurus
ENSTTRG00000002654	SNRPD1	100	97.391	ENSBTAG00000047266	-	97	97.391	Bos_taurus
ENSTTRG00000002654	SNRPD1	97	96.396	ENSBTAG00000012376	-	83	96.396	Bos_taurus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSBTAG00000008292	SNRPD1	97	100.000	Bos_taurus
ENSTTRG00000002654	SNRPD1	73	79.762	WBGene00004916	snr-3	73	75.000	Caenorhabditis_elegans
ENSTTRG00000002654	SNRPD1	100	100.000	ENSCJAG00000042955	SNRPD1	97	100.000	Callithrix_jacchus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSCAFG00000018247	SNRPD1	97	100.000	Canis_familiaris
ENSTTRG00000002654	SNRPD1	79	100.000	ENSCAFG00020015914	SNRPD1	71	100.000	Canis_lupus_dingo
ENSTTRG00000002654	SNRPD1	100	100.000	ENSCHIG00000005557	SNRPD1	97	100.000	Capra_hircus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSTSYG00000030028	SNRPD1	97	100.000	Carlito_syrichta
ENSTTRG00000002654	SNRPD1	100	99.130	ENSCAPG00000008103	SNRPD1	99	99.130	Cavia_aperea
ENSTTRG00000002654	SNRPD1	100	100.000	ENSCPOG00000004679	SNRPD1	99	99.130	Cavia_porcellus
ENSTTRG00000002654	SNRPD1	100	99.130	ENSCCAG00000020611	-	97	99.130	Cebus_capucinus
ENSTTRG00000002654	SNRPD1	100	96.522	ENSCCAG00000016652	-	97	96.522	Cebus_capucinus
ENSTTRG00000002654	SNRPD1	80	95.652	ENSCCAG00000005390	-	77	95.652	Cebus_capucinus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSCCAG00000032658	SNRPD1	97	100.000	Cebus_capucinus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSCATG00000039978	SNRPD1	97	100.000	Cercocebus_atys
ENSTTRG00000002654	SNRPD1	100	100.000	ENSCLAG00000008691	SNRPD1	97	100.000	Chinchilla_lanigera
ENSTTRG00000002654	SNRPD1	100	100.000	ENSCSAG00000017654	SNRPD1	97	100.000	Chlorocebus_sabaeus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSCPBG00000023143	SNRPD1	97	100.000	Chrysemys_picta_bellii
ENSTTRG00000002654	SNRPD1	71	87.805	ENSCING00000024100	-	66	87.805	Ciona_intestinalis
ENSTTRG00000002654	SNRPD1	72	85.542	ENSCSAVG00000004578	-	66	85.542	Ciona_savignyi
ENSTTRG00000002654	SNRPD1	100	100.000	ENSCGRG00001021055	-	97	100.000	Cricetulus_griseus_chok1gshd
ENSTTRG00000002654	SNRPD1	80	75.000	ENSCGRG00001009945	-	81	75.000	Cricetulus_griseus_chok1gshd
ENSTTRG00000002654	SNRPD1	80	75.000	ENSCGRG00000006224	-	81	75.000	Cricetulus_griseus_crigri
ENSTTRG00000002654	SNRPD1	100	100.000	ENSCGRG00000000490	-	97	100.000	Cricetulus_griseus_crigri
ENSTTRG00000002654	SNRPD1	79	94.505	ENSCSEG00000018141	snrpd1	77	94.565	Cynoglossus_semilaevis
ENSTTRG00000002654	SNRPD1	100	96.522	ENSCVAG00000000534	snrpd1	97	96.522	Cyprinodon_variegatus
ENSTTRG00000002654	SNRPD1	100	97.391	ENSDARG00000011648	snrpd1	97	97.391	Danio_rerio
ENSTTRG00000002654	SNRPD1	100	100.000	ENSDNOG00000040310	SNRPD1	97	100.000	Dasypus_novemcinctus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSDORG00000008349	Snrpd1	97	100.000	Dipodomys_ordii
ENSTTRG00000002654	SNRPD1	78	82.222	FBgn0261933	SmD1	73	82.222	Drosophila_melanogaster
ENSTTRG00000002654	SNRPD1	77	100.000	ENSETEG00000011689	SNRPD1	74	100.000	Echinops_telfairi
ENSTTRG00000002654	SNRPD1	94	92.593	ENSEBUG00000003170	snrpd1	91	92.593	Eptatretus_burgeri
ENSTTRG00000002654	SNRPD1	97	100.000	ENSEASG00005002433	SNRPD1	100	100.000	Equus_asinus_asinus
ENSTTRG00000002654	SNRPD1	97	100.000	ENSECAG00000014373	SNRPD1	100	100.000	Equus_caballus
ENSTTRG00000002654	SNRPD1	77	100.000	ENSEEUG00000004987	SNRPD1	100	100.000	Erinaceus_europaeus
ENSTTRG00000002654	SNRPD1	93	85.047	ENSELUG00000000088	snrpd1	76	95.556	Esox_lucius
ENSTTRG00000002654	SNRPD1	100	100.000	ENSFCAG00000012352	SNRPD1	97	100.000	Felis_catus
ENSTTRG00000002654	SNRPD1	97	100.000	ENSFALG00000002646	SNRPD1	100	100.000	Ficedula_albicollis
ENSTTRG00000002654	SNRPD1	100	97.391	ENSGMOG00000015607	snrpd1	97	97.391	Gadus_morhua
ENSTTRG00000002654	SNRPD1	100	100.000	ENSGALG00000041334	SNRPD1	97	100.000	Gallus_gallus
ENSTTRG00000002654	SNRPD1	100	96.522	ENSGAFG00000011171	snrpd1	97	96.522	Gambusia_affinis
ENSTTRG00000002654	SNRPD1	100	97.391	ENSGACG00000005201	SNRPD1	97	97.391	Gasterosteus_aculeatus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSGAGG00000011197	SNRPD1	97	100.000	Gopherus_agassizii
ENSTTRG00000002654	SNRPD1	100	100.000	ENSGGOG00000041053	SNRPD1	97	100.000	Gorilla_gorilla
ENSTTRG00000002654	SNRPD1	80	94.565	ENSGGOG00000026706	-	77	94.565	Gorilla_gorilla
ENSTTRG00000002654	SNRPD1	100	96.522	ENSHBUG00000003236	snrpd1	97	96.522	Haplochromis_burtoni
ENSTTRG00000002654	SNRPD1	100	100.000	ENSHGLG00000007152	SNRPD1	97	100.000	Heterocephalus_glaber_female
ENSTTRG00000002654	SNRPD1	100	100.000	ENSHGLG00100008618	SNRPD1	97	100.000	Heterocephalus_glaber_male
ENSTTRG00000002654	SNRPD1	100	96.522	ENSIPUG00000003576	snrpd1	97	96.522	Ictalurus_punctatus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSSTOG00000000485	SNRPD1	97	100.000	Ictidomys_tridecemlineatus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSJJAG00000017698	Snrpd1	97	100.000	Jaculus_jaculus
ENSTTRG00000002654	SNRPD1	100	96.522	ENSKMAG00000005987	snrpd1	97	96.522	Kryptolebias_marmoratus
ENSTTRG00000002654	SNRPD1	100	96.522	ENSLBEG00000003327	snrpd1	97	96.522	Labrus_bergylta
ENSTTRG00000002654	SNRPD1	100	100.000	ENSLACG00000001955	SNRPD1	97	100.000	Latimeria_chalumnae
ENSTTRG00000002654	SNRPD1	100	98.261	ENSLOCG00000002003	snrpd1	98	98.261	Lepisosteus_oculatus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSLAFG00000005819	SNRPD1	97	100.000	Loxodonta_africana
ENSTTRG00000002654	SNRPD1	100	100.000	ENSMFAG00000042080	SNRPD1	97	100.000	Macaca_fascicularis
ENSTTRG00000002654	SNRPD1	99	100.000	ENSMMUG00000003992	SNRPD1	97	100.000	Macaca_mulatta
ENSTTRG00000002654	SNRPD1	100	100.000	ENSMNEG00000041296	SNRPD1	97	100.000	Macaca_nemestrina
ENSTTRG00000002654	SNRPD1	100	100.000	ENSMLEG00000028659	SNRPD1	97	100.000	Mandrillus_leucophaeus
ENSTTRG00000002654	SNRPD1	100	96.522	ENSMAMG00000012971	snrpd1	97	96.522	Mastacembelus_armatus
ENSTTRG00000002654	SNRPD1	100	96.522	ENSMZEG00005004685	snrpd1	97	96.522	Maylandia_zebra
ENSTTRG00000002654	SNRPD1	100	100.000	ENSMGAG00000011598	SNRPD1	95	100.000	Meleagris_gallopavo
ENSTTRG00000002654	SNRPD1	80	83.696	ENSMAUG00000016502	-	83	83.696	Mesocricetus_auratus
ENSTTRG00000002654	SNRPD1	84	94.845	ENSMAUG00000006829	-	62	94.845	Mesocricetus_auratus
ENSTTRG00000002654	SNRPD1	80	83.696	ENSMAUG00000016467	-	83	83.696	Mesocricetus_auratus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSMICG00000044066	SNRPD1	97	100.000	Microcebus_murinus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSMOCG00000017367	Snrpd1	97	100.000	Microtus_ochrogaster
ENSTTRG00000002654	SNRPD1	100	96.522	ENSMMOG00000019089	snrpd1	97	96.522	Mola_mola
ENSTTRG00000002654	SNRPD1	100	100.000	ENSMODG00000021487	SNRPD1	98	100.000	Monodelphis_domestica
ENSTTRG00000002654	SNRPD1	100	96.522	ENSMALG00000014459	snrpd1	97	96.522	Monopterus_albus
ENSTTRG00000002654	SNRPD1	100	100.000	MGP_CAROLIEiJ_G0021994	Snrpd1	97	100.000	Mus_caroli
ENSTTRG00000002654	SNRPD1	100	100.000	ENSMUSG00000002477	Snrpd1	97	100.000	Mus_musculus
ENSTTRG00000002654	SNRPD1	100	100.000	MGP_PahariEiJ_G0018731	Snrpd1	97	100.000	Mus_pahari
ENSTTRG00000002654	SNRPD1	100	100.000	MGP_SPRETEiJ_G0022910	Snrpd1	97	100.000	Mus_spretus
ENSTTRG00000002654	SNRPD1	100	99.130	ENSMPUG00000020041	-	97	99.130	Mustela_putorius_furo
ENSTTRG00000002654	SNRPD1	100	100.000	ENSMPUG00000005567	-	98	100.000	Mustela_putorius_furo
ENSTTRG00000002654	SNRPD1	99	98.246	ENSMLUG00000009124	SNRPD1	88	98.246	Myotis_lucifugus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSNGAG00000023946	Snrpd1	97	100.000	Nannospalax_galili
ENSTTRG00000002654	SNRPD1	78	95.556	ENSNBRG00000012119	snrpd1	74	95.556	Neolamprologus_brichardi
ENSTTRG00000002654	SNRPD1	100	97.391	ENSNLEG00000031430	SNRPD1	97	97.391	Nomascus_leucogenys
ENSTTRG00000002654	SNRPD1	100	100.000	ENSODEG00000005764	SNRPD1	97	100.000	Octodon_degus
ENSTTRG00000002654	SNRPD1	100	96.522	ENSONIG00000002486	snrpd1	97	96.522	Oreochromis_niloticus
ENSTTRG00000002654	SNRPD1	85	88.776	ENSOANG00000004638	-	82	88.776	Ornithorhynchus_anatinus
ENSTTRG00000002654	SNRPD1	100	99.130	ENSOCUG00000014399	-	97	99.130	Oryctolagus_cuniculus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSOCUG00000023761	-	98	100.000	Oryctolagus_cuniculus
ENSTTRG00000002654	SNRPD1	97	96.429	ENSORLG00000012516	snrpd1	100	96.429	Oryzias_latipes
ENSTTRG00000002654	SNRPD1	100	96.522	ENSORLG00020005743	snrpd1	97	96.522	Oryzias_latipes_hni
ENSTTRG00000002654	SNRPD1	100	96.522	ENSORLG00015013402	snrpd1	97	96.522	Oryzias_latipes_hsok
ENSTTRG00000002654	SNRPD1	100	96.522	ENSOMEG00000011571	snrpd1	97	96.522	Oryzias_melastigma
ENSTTRG00000002654	SNRPD1	100	100.000	ENSOGAG00000007833	SNRPD1	97	100.000	Otolemur_garnettii
ENSTTRG00000002654	SNRPD1	100	94.783	ENSOARG00000003413	-	82	94.783	Ovis_aries
ENSTTRG00000002654	SNRPD1	100	100.000	ENSPPAG00000042593	SNRPD1	97	100.000	Pan_paniscus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSPPRG00000002399	SNRPD1	97	100.000	Panthera_pardus
ENSTTRG00000002654	SNRPD1	80	66.304	ENSPPRG00000005009	-	88	71.296	Panthera_pardus
ENSTTRG00000002654	SNRPD1	99	100.000	ENSPTIG00000013206	SNRPD1	100	100.000	Panthera_tigris_altaica
ENSTTRG00000002654	SNRPD1	85	93.878	ENSPTRG00000050159	-	84	93.878	Pan_troglodytes
ENSTTRG00000002654	SNRPD1	100	100.000	ENSPTRG00000009909	SNRPD1	97	100.000	Pan_troglodytes
ENSTTRG00000002654	SNRPD1	100	100.000	ENSPANG00000023478	SNRPD1	97	100.000	Papio_anubis
ENSTTRG00000002654	SNRPD1	91	95.238	ENSPKIG00000021610	snrpd1	94	95.238	Paramormyrops_kingsleyae
ENSTTRG00000002654	SNRPD1	100	97.391	ENSPKIG00000003985	SNRPD1	97	97.391	Paramormyrops_kingsleyae
ENSTTRG00000002654	SNRPD1	100	96.522	ENSPMGG00000001862	snrpd1	97	96.522	Periophthalmus_magnuspinnatus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSPEMG00000014773	-	97	100.000	Peromyscus_maniculatus_bairdii
ENSTTRG00000002654	SNRPD1	85	83.000	ENSPMAG00000003938	-	82	83.000	Petromyzon_marinus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSPCIG00000020320	SNRPD1	100	100.000	Phascolarctos_cinereus
ENSTTRG00000002654	SNRPD1	80	95.652	ENSPFOG00000012448	SNRPD1	81	95.652	Poecilia_formosa
ENSTTRG00000002654	SNRPD1	80	95.652	ENSPLAG00000006738	snrpd1	81	95.652	Poecilia_latipinna
ENSTTRG00000002654	SNRPD1	80	95.652	ENSPMEG00000021942	snrpd1	81	95.652	Poecilia_mexicana
ENSTTRG00000002654	SNRPD1	100	96.522	ENSPREG00000007094	snrpd1	97	96.522	Poecilia_reticulata
ENSTTRG00000002654	SNRPD1	100	100.000	ENSPPYG00000025874	SNRPD1	97	100.000	Pongo_abelii
ENSTTRG00000002654	SNRPD1	100	100.000	ENSPCOG00000013327	SNRPD1	97	100.000	Propithecus_coquereli
ENSTTRG00000002654	SNRPD1	100	100.000	ENSPVAG00000005511	SNRPD1	77	100.000	Pteropus_vampyrus
ENSTTRG00000002654	SNRPD1	100	96.522	ENSPNAG00000017824	snrpd1	97	96.522	Pygocentrus_nattereri
ENSTTRG00000002654	SNRPD1	100	100.000	ENSRNOG00000013714	Snrpd1	97	100.000	Rattus_norvegicus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSRBIG00000022996	SNRPD1	97	100.000	Rhinopithecus_bieti
ENSTTRG00000002654	SNRPD1	100	100.000	ENSRROG00000027640	SNRPD1	97	100.000	Rhinopithecus_roxellana
ENSTTRG00000002654	SNRPD1	100	100.000	ENSSBOG00000020998	SNRPD1	97	100.000	Saimiri_boliviensis_boliviensis
ENSTTRG00000002654	SNRPD1	100	100.000	ENSSHAG00000011791	SNRPD1	97	100.000	Sarcophilus_harrisii
ENSTTRG00000002654	SNRPD1	94	95.370	ENSSFOG00015008809	-	91	95.370	Scleropages_formosus
ENSTTRG00000002654	SNRPD1	94	95.370	ENSSFOG00015022253	-	91	95.370	Scleropages_formosus
ENSTTRG00000002654	SNRPD1	94	95.370	ENSSMAG00000008765	snrpd1	94	95.238	Scophthalmus_maximus
ENSTTRG00000002654	SNRPD1	94	95.370	ENSSDUG00000010521	snrpd1	92	95.370	Seriola_dumerili
ENSTTRG00000002654	SNRPD1	100	96.522	ENSSLDG00000011858	snrpd1	97	96.522	Seriola_lalandi_dorsalis
ENSTTRG00000002654	SNRPD1	58	100.000	ENSSARG00000004271	SNRPD1	100	100.000	Sorex_araneus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSSPUG00000002824	SNRPD1	97	100.000	Sphenodon_punctatus
ENSTTRG00000002654	SNRPD1	97	96.429	ENSSPAG00000015229	snrpd1	100	96.429	Stegastes_partitus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSSSCG00000003701	SNRPD1	100	100.000	Sus_scrofa
ENSTTRG00000002654	SNRPD1	100	100.000	ENSTGUG00000005095	SNRPD1	97	100.000	Taeniopygia_guttata
ENSTTRG00000002654	SNRPD1	97	96.429	ENSTRUG00000008977	snrpd1	100	96.429	Takifugu_rubripes
ENSTTRG00000002654	SNRPD1	83	91.667	ENSTNIG00000001224	snrpd1	92	91.667	Tetraodon_nigroviridis
ENSTTRG00000002654	SNRPD1	77	100.000	ENSTBEG00000013776	SNRPD1	100	100.000	Tupaia_belangeri
ENSTTRG00000002654	SNRPD1	99	100.000	ENSUAMG00000013431	SNRPD1	97	100.000	Ursus_americanus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSUMAG00000019740	SNRPD1	97	100.000	Ursus_maritimus
ENSTTRG00000002654	SNRPD1	100	100.000	ENSVPAG00000010056	SNRPD1	77	100.000	Vicugna_pacos
ENSTTRG00000002654	SNRPD1	97	100.000	ENSVVUG00000004009	SNRPD1	100	100.000	Vulpes_vulpes
ENSTTRG00000002654	SNRPD1	100	98.261	ENSXETG00000027354	snrpd1	97	98.261	Xenopus_tropicalis
ENSTTRG00000002654	SNRPD1	100	96.522	ENSXCOG00000020108	snrpd1	97	96.522	Xiphophorus_couchianus
ENSTTRG00000002654	SNRPD1	100	96.522	ENSXMAG00000003368	snrpd1	97	96.522	Xiphophorus_maculatus