EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000002839 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 10462 bases
Position: chrscaffold_103641:141892-152353
Accession: 101334167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000002661	RRM_1	PF00076.22	7.6e-38	1	3
ENSTTRP00000002661	RRM_1	PF00076.22	7.6e-38	2	3
ENSTTRP00000002661	RRM_1	PF00076.22	7.6e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000002838	-	1764	-	ENSTTRP00000002661	587 (aa)	XP_019783849	A0A2U4ASS6

Gene Model

Click here to download ENSTTRG00000002839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000002839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000002839	RBM47	57	68.168	ENSTTRG00000001239	RBM46	56	74.000
ENSTTRG00000002839	RBM47	69	55.924	ENSTTRG00000013190	A1CF	69	55.687

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000002839	RBM47	100	95.966	ENSG00000163694	RBM47	100	99.078	Homo_sapiens
ENSTTRG00000002839	RBM47	100	77.889	ENSAPOG00000011062	rbm47	93	85.393	Acanthochromis_polyacanthus
ENSTTRG00000002839	RBM47	100	96.134	ENSAMEG00000009672	RBM47	100	96.134	Ailuropoda_melanoleuca
ENSTTRG00000002839	RBM47	100	77.647	ENSACIG00000011531	rbm47	100	77.815	Amphilophus_citrinellus
ENSTTRG00000002839	RBM47	100	78.151	ENSAOCG00000022245	rbm47	93	85.393	Amphiprion_ocellaris
ENSTTRG00000002839	RBM47	100	78.451	ENSAPEG00000018304	rbm47	100	78.451	Amphiprion_percula
ENSTTRG00000002839	RBM47	100	77.632	ENSATEG00000018400	rbm47	94	79.443	Anabas_testudineus
ENSTTRG00000002839	RBM47	100	88.663	ENSAPLG00000013974	RBM47	100	88.325	Anas_platyrhynchos
ENSTTRG00000002839	RBM47	100	85.167	ENSACAG00000011833	RBM47	100	85.333	Anolis_carolinensis
ENSTTRG00000002839	RBM47	100	95.798	ENSANAG00000029440	RBM47	100	95.798	Aotus_nancymaae
ENSTTRG00000002839	RBM47	100	76.105	ENSACLG00000016902	rbm47	94	85.955	Astatotilapia_calliptera
ENSTTRG00000002839	RBM47	100	76.073	ENSAMXG00000021794	rbm47	95	78.397	Astyanax_mexicanus
ENSTTRG00000002839	RBM47	100	97.970	ENSBTAG00000002356	RBM47	100	97.970	Bos_taurus
ENSTTRG00000002839	RBM47	100	95.470	ENSCJAG00000019385	RBM47	100	95.470	Callithrix_jacchus
ENSTTRG00000002839	RBM47	96	95.079	ENSCAFG00000015898	RBM47	100	92.580	Canis_familiaris
ENSTTRG00000002839	RBM47	87	95.340	ENSCAFG00020010558	RBM47	94	92.593	Canis_lupus_dingo
ENSTTRG00000002839	RBM47	100	98.139	ENSCHIG00000026214	RBM47	100	98.139	Capra_hircus
ENSTTRG00000002839	RBM47	78	88.426	ENSTSYG00000033612	RBM47	92	89.823	Carlito_syrichta
ENSTTRG00000002839	RBM47	100	87.858	ENSCAPG00000008426	RBM47	100	87.521	Cavia_aperea
ENSTTRG00000002839	RBM47	100	95.616	ENSCPOG00000014100	RBM47	100	95.616	Cavia_porcellus
ENSTTRG00000002839	RBM47	100	95.470	ENSCCAG00000030129	-	100	95.470	Cebus_capucinus
ENSTTRG00000002839	RBM47	99	67.797	ENSCCAG00000024397	-	99	67.692	Cebus_capucinus
ENSTTRG00000002839	RBM47	100	96.944	ENSCATG00000042064	RBM47	100	96.944	Cercocebus_atys
ENSTTRG00000002839	RBM47	100	95.608	ENSCLAG00000001684	RBM47	100	95.608	Chinchilla_lanigera
ENSTTRG00000002839	RBM47	100	96.134	ENSCSAG00000017060	RBM47	100	96.134	Chlorocebus_sabaeus
ENSTTRG00000002839	RBM47	89	88.764	ENSCHOG00000011731	RBM47	88	88.608	Choloepus_hoffmanni
ENSTTRG00000002839	RBM47	100	90.604	ENSCPBG00000013831	RBM47	100	90.604	Chrysemys_picta_bellii
ENSTTRG00000002839	RBM47	100	96.774	ENSCANG00000019997	RBM47	100	96.774	Colobus_angolensis_palliatus
ENSTTRG00000002839	RBM47	100	64.667	ENSCGRG00001020102	-	100	73.254	Cricetulus_griseus_chok1gshd
ENSTTRG00000002839	RBM47	100	92.593	ENSCGRG00001000623	-	100	92.256	Cricetulus_griseus_chok1gshd
ENSTTRG00000002839	RBM47	100	91.751	ENSCGRG00000007762	-	100	94.304	Cricetulus_griseus_crigri
ENSTTRG00000002839	RBM47	100	64.333	ENSCGRG00000014760	-	100	72.913	Cricetulus_griseus_crigri
ENSTTRG00000002839	RBM47	100	75.503	ENSCSEG00000004545	rbm47	100	74.411	Cynoglossus_semilaevis
ENSTTRG00000002839	RBM47	100	76.560	ENSCVAG00000020144	rbm47	93	85.634	Cyprinodon_variegatus
ENSTTRG00000002839	RBM47	100	77.483	ENSDARG00000061985	rbm47	95	79.685	Danio_rerio
ENSTTRG00000002839	RBM47	100	96.259	ENSDNOG00000046854	RBM47	100	96.259	Dasypus_novemcinctus
ENSTTRG00000002839	RBM47	100	94.975	ENSDORG00000010144	Rbm47	100	94.975	Dipodomys_ordii
ENSTTRG00000002839	RBM47	100	94.472	ENSETEG00000009194	RBM47	100	94.472	Echinops_telfairi
ENSTTRG00000002839	RBM47	99	57.807	ENSEBUG00000011912	rbm47	95	60.209	Eptatretus_burgeri
ENSTTRG00000002839	RBM47	100	97.631	ENSEASG00005008443	RBM47	100	97.631	Equus_asinus_asinus
ENSTTRG00000002839	RBM47	100	97.631	ENSECAG00000004400	RBM47	100	97.631	Equus_caballus
ENSTTRG00000002839	RBM47	75	95.671	ENSEEUG00000001194	RBM47	75	95.671	Erinaceus_europaeus
ENSTTRG00000002839	RBM47	99	75.635	ENSELUG00000006148	rbm47	93	85.515	Esox_lucius
ENSTTRG00000002839	RBM47	100	97.458	ENSFCAG00000012399	RBM47	100	97.458	Felis_catus
ENSTTRG00000002839	RBM47	100	90.420	ENSFALG00000002861	RBM47	100	90.252	Ficedula_albicollis
ENSTTRG00000002839	RBM47	100	93.232	ENSFDAG00000016326	RBM47	100	92.217	Fukomys_damarensis
ENSTTRG00000002839	RBM47	100	77.778	ENSFHEG00000007938	rbm47	100	76.599	Fundulus_heteroclitus
ENSTTRG00000002839	RBM47	100	74.309	ENSGMOG00000014802	rbm47	94	75.694	Gadus_morhua
ENSTTRG00000002839	RBM47	64	92.287	ENSGALG00000014267	RBM47	99	92.287	Gallus_gallus
ENSTTRG00000002839	RBM47	64	83.511	ENSGAFG00000020571	rbm47	98	81.698	Gambusia_affinis
ENSTTRG00000002839	RBM47	100	74.426	ENSGACG00000016223	rbm47	93	83.708	Gasterosteus_aculeatus
ENSTTRG00000002839	RBM47	100	90.772	ENSGAGG00000020051	RBM47	100	90.772	Gopherus_agassizii
ENSTTRG00000002839	RBM47	100	96.944	ENSGGOG00000001367	RBM47	100	96.944	Gorilla_gorilla
ENSTTRG00000002839	RBM47	100	75.856	ENSHBUG00000003520	rbm47	94	85.955	Haplochromis_burtoni
ENSTTRG00000002839	RBM47	84	85.246	ENSHGLG00000016914	RBM47	100	94.937	Heterocephalus_glaber_female
ENSTTRG00000002839	RBM47	100	85.059	ENSHGLG00100003071	-	100	83.871	Heterocephalus_glaber_male
ENSTTRG00000002839	RBM47	100	93.559	ENSHGLG00100014028	-	100	94.937	Heterocephalus_glaber_male
ENSTTRG00000002839	RBM47	99	76.936	ENSHCOG00000002074	rbm47	93	83.708	Hippocampus_comes
ENSTTRG00000002839	RBM47	100	77.909	ENSIPUG00000004743	rbm47	97	79.262	Ictalurus_punctatus
ENSTTRG00000002839	RBM47	100	95.638	ENSSTOG00000004727	RBM47	100	95.638	Ictidomys_tridecemlineatus
ENSTTRG00000002839	RBM47	100	94.958	ENSJJAG00000013823	Rbm47	100	94.958	Jaculus_jaculus
ENSTTRG00000002839	RBM47	100	78.224	ENSKMAG00000000084	rbm47	100	77.387	Kryptolebias_marmoratus
ENSTTRG00000002839	RBM47	100	76.678	ENSLBEG00000008436	rbm47	100	75.084	Labrus_bergylta
ENSTTRG00000002839	RBM47	100	85.522	ENSLACG00000007196	RBM47	100	85.017	Latimeria_chalumnae
ENSTTRG00000002839	RBM47	100	82.462	ENSLOCG00000012966	rbm47	95	81.619	Lepisosteus_oculatus
ENSTTRG00000002839	RBM47	100	93.613	ENSLAFG00000011998	RBM47	100	92.437	Loxodonta_africana
ENSTTRG00000002839	RBM47	100	96.944	ENSMFAG00000037967	RBM47	100	96.944	Macaca_fascicularis
ENSTTRG00000002839	RBM47	100	96.134	ENSMMUG00000012036	RBM47	100	98.964	Macaca_mulatta
ENSTTRG00000002839	RBM47	100	96.944	ENSMNEG00000040774	RBM47	100	96.944	Macaca_nemestrina
ENSTTRG00000002839	RBM47	100	99.048	ENSMLEG00000041432	RBM47	100	99.048	Mandrillus_leucophaeus
ENSTTRG00000002839	RBM47	100	77.265	ENSMAMG00000019143	rbm47	94	82.181	Mastacembelus_armatus
ENSTTRG00000002839	RBM47	100	76.105	ENSMZEG00005023659	rbm47	95	78.929	Maylandia_zebra
ENSTTRG00000002839	RBM47	100	89.799	ENSMGAG00000012226	RBM47	100	89.632	Meleagris_gallopavo
ENSTTRG00000002839	RBM47	100	93.592	ENSMAUG00000006493	Rbm47	100	94.304	Mesocricetus_auratus
ENSTTRG00000002839	RBM47	100	89.643	ENSMICG00000026417	RBM47	100	91.171	Microcebus_murinus
ENSTTRG00000002839	RBM47	100	93.919	ENSMOCG00000021170	Rbm47	100	94.937	Microtus_ochrogaster
ENSTTRG00000002839	RBM47	100	77.100	ENSMMOG00000007260	rbm47	95	78.049	Mola_mola
ENSTTRG00000002839	RBM47	100	82.173	ENSMODG00000020561	-	97	83.480	Monodelphis_domestica
ENSTTRG00000002839	RBM47	100	91.062	ENSMODG00000007003	RBM47	100	90.219	Monodelphis_domestica
ENSTTRG00000002839	RBM47	52	82.051	ENSMODG00000015426	-	97	79.743	Monodelphis_domestica
ENSTTRG00000002839	RBM47	100	77.143	ENSMALG00000005167	rbm47	94	85.393	Monopterus_albus
ENSTTRG00000002839	RBM47	100	93.739	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.232	Mus_caroli
ENSTTRG00000002839	RBM47	100	94.078	ENSMUSG00000070780	Rbm47	100	93.570	Mus_musculus
ENSTTRG00000002839	RBM47	100	94.078	MGP_PahariEiJ_G0017040	Rbm47	100	93.671	Mus_pahari
ENSTTRG00000002839	RBM47	100	94.388	MGP_SPRETEiJ_G0028253	Rbm47	100	94.218	Mus_spretus
ENSTTRG00000002839	RBM47	100	97.128	ENSMPUG00000006177	RBM47	94	97.128	Mustela_putorius_furo
ENSTTRG00000002839	RBM47	100	94.237	ENSMLUG00000000889	RBM47	100	94.068	Myotis_lucifugus
ENSTTRG00000002839	RBM47	100	94.266	ENSNGAG00000003325	Rbm47	100	93.761	Nannospalax_galili
ENSTTRG00000002839	RBM47	100	75.980	ENSNBRG00000015092	rbm47	95	78.448	Neolamprologus_brichardi
ENSTTRG00000002839	RBM47	100	96.604	ENSNLEG00000017151	RBM47	100	96.604	Nomascus_leucogenys
ENSTTRG00000002839	RBM47	73	87.383	ENSMEUG00000009516	-	99	86.588	Notamacropus_eugenii
ENSTTRG00000002839	RBM47	75	96.281	ENSOPRG00000016507	-	75	96.281	Ochotona_princeps
ENSTTRG00000002839	RBM47	100	95.777	ENSODEG00000004873	RBM47	100	95.777	Octodon_degus
ENSTTRG00000002839	RBM47	100	76.268	ENSONIG00000009061	rbm47	94	78.646	Oreochromis_niloticus
ENSTTRG00000002839	RBM47	100	88.067	ENSOANG00000008978	RBM47	100	88.235	Ornithorhynchus_anatinus
ENSTTRG00000002839	RBM47	100	95.946	ENSOCUG00000012034	RBM47	100	95.946	Oryctolagus_cuniculus
ENSTTRG00000002839	RBM47	100	77.104	ENSORLG00000005847	rbm47	94	84.831	Oryzias_latipes
ENSTTRG00000002839	RBM47	100	77.273	ENSORLG00020005154	rbm47	94	84.831	Oryzias_latipes_hni
ENSTTRG00000002839	RBM47	100	77.778	ENSORLG00015000066	rbm47	94	85.112	Oryzias_latipes_hsok
ENSTTRG00000002839	RBM47	100	79.461	ENSOMEG00000010730	rbm47	100	78.114	Oryzias_melastigma
ENSTTRG00000002839	RBM47	100	96.959	ENSOGAG00000029367	-	100	96.959	Otolemur_garnettii
ENSTTRG00000002839	RBM47	100	88.095	ENSOGAG00000025193	-	100	87.075	Otolemur_garnettii
ENSTTRG00000002839	RBM47	100	89.983	ENSOARG00000012711	RBM47	100	89.983	Ovis_aries
ENSTTRG00000002839	RBM47	100	96.774	ENSPPAG00000029763	RBM47	100	96.774	Pan_paniscus
ENSTTRG00000002839	RBM47	100	94.237	ENSPPRG00000012873	RBM47	100	94.237	Panthera_pardus
ENSTTRG00000002839	RBM47	85	94.578	ENSPTIG00000017046	RBM47	100	94.578	Panthera_tigris_altaica
ENSTTRG00000002839	RBM47	100	96.944	ENSPTRG00000016006	RBM47	100	96.944	Pan_troglodytes
ENSTTRG00000002839	RBM47	100	96.944	ENSPANG00000005980	RBM47	100	96.944	Papio_anubis
ENSTTRG00000002839	RBM47	96	76.440	ENSPKIG00000013431	RBM47	92	85.352	Paramormyrops_kingsleyae
ENSTTRG00000002839	RBM47	96	78.634	ENSPKIG00000005037	rbm47	95	77.933	Paramormyrops_kingsleyae
ENSTTRG00000002839	RBM47	90	91.288	ENSPSIG00000017516	RBM47	97	90.909	Pelodiscus_sinensis
ENSTTRG00000002839	RBM47	100	75.758	ENSPMGG00000018540	rbm47	100	75.589	Periophthalmus_magnuspinnatus
ENSTTRG00000002839	RBM47	100	94.098	ENSPEMG00000011088	Rbm47	100	93.761	Peromyscus_maniculatus_bairdii
ENSTTRG00000002839	RBM47	96	79.412	ENSPFOG00000007997	rbm47	94	78.028	Poecilia_formosa
ENSTTRG00000002839	RBM47	96	79.376	ENSPLAG00000002072	rbm47	100	81.649	Poecilia_latipinna
ENSTTRG00000002839	RBM47	100	78.297	ENSPMEG00000017492	rbm47	93	85.352	Poecilia_mexicana
ENSTTRG00000002839	RBM47	96	79.896	ENSPREG00000008456	rbm47	100	81.915	Poecilia_reticulata
ENSTTRG00000002839	RBM47	98	81.926	ENSPPYG00000014688	RBM47	98	81.647	Pongo_abelii
ENSTTRG00000002839	RBM47	81	96.758	ENSPCAG00000011879	RBM47	81	96.758	Procavia_capensis
ENSTTRG00000002839	RBM47	100	92.517	ENSPCOG00000023451	RBM47	100	92.007	Propithecus_coquereli
ENSTTRG00000002839	RBM47	100	95.623	ENSPVAG00000003812	RBM47	100	95.623	Pteropus_vampyrus
ENSTTRG00000002839	RBM47	100	75.733	ENSPNYG00000022868	rbm47	95	78.007	Pundamilia_nyererei
ENSTTRG00000002839	RBM47	100	76.442	ENSPNAG00000007940	rbm47	95	78.609	Pygocentrus_nattereri
ENSTTRG00000002839	RBM47	100	94.247	ENSRNOG00000002408	Rbm47	100	93.739	Rattus_norvegicus
ENSTTRG00000002839	RBM47	100	96.774	ENSRBIG00000039601	RBM47	100	96.774	Rhinopithecus_bieti
ENSTTRG00000002839	RBM47	100	96.774	ENSRROG00000044696	RBM47	100	96.774	Rhinopithecus_roxellana
ENSTTRG00000002839	RBM47	100	92.869	ENSSBOG00000028475	RBM47	100	97.113	Saimiri_boliviensis_boliviensis
ENSTTRG00000002839	RBM47	100	91.709	ENSSHAG00000017576	RBM47	100	91.032	Sarcophilus_harrisii
ENSTTRG00000002839	RBM47	100	74.500	ENSSFOG00015012445	rbm47	94	75.661	Scleropages_formosus
ENSTTRG00000002839	RBM47	100	75.462	ENSSFOG00015024101	RBM47	97	76.696	Scleropages_formosus
ENSTTRG00000002839	RBM47	100	75.369	ENSSMAG00000009744	rbm47	94	83.427	Scophthalmus_maximus
ENSTTRG00000002839	RBM47	100	78.620	ENSSDUG00000022684	rbm47	100	77.946	Seriola_dumerili
ENSTTRG00000002839	RBM47	100	78.956	ENSSLDG00000003109	rbm47	100	77.778	Seriola_lalandi_dorsalis
ENSTTRG00000002839	RBM47	85	96.429	ENSSARG00000001735	RBM47	84	96.429	Sorex_araneus
ENSTTRG00000002839	RBM47	100	88.702	ENSSPUG00000007515	RBM47	100	89.362	Sphenodon_punctatus
ENSTTRG00000002839	RBM47	100	79.293	ENSSPAG00000001257	rbm47	93	86.236	Stegastes_partitus
ENSTTRG00000002839	RBM47	100	97.970	ENSSSCG00000008796	RBM47	100	97.970	Sus_scrofa
ENSTTRG00000002839	RBM47	100	90.067	ENSTGUG00000008705	RBM47	100	89.899	Taeniopygia_guttata
ENSTTRG00000002839	RBM47	98	77.094	ENSTRUG00000014050	rbm47	100	74.579	Takifugu_rubripes
ENSTTRG00000002839	RBM47	100	75.618	ENSTNIG00000006127	rbm47	95	77.352	Tetraodon_nigroviridis
ENSTTRG00000002839	RBM47	77	90.909	ENSTBEG00000001607	RBM47	76	90.909	Tupaia_belangeri
ENSTTRG00000002839	RBM47	100	96.959	ENSUAMG00000021346	RBM47	100	96.959	Ursus_americanus
ENSTTRG00000002839	RBM47	56	97.260	ENSVPAG00000000641	-	57	97.260	Vicugna_pacos
ENSTTRG00000002839	RBM47	100	94.932	ENSVVUG00000014774	RBM47	100	94.932	Vulpes_vulpes
ENSTTRG00000002839	RBM47	100	86.464	ENSXETG00000012802	rbm47	100	85.956	Xenopus_tropicalis
ENSTTRG00000002839	RBM47	88	83.245	ENSXCOG00000000780	rbm47	100	81.649	Xiphophorus_couchianus
ENSTTRG00000002839	RBM47	100	77.181	ENSXMAG00000009874	rbm47	93	85.070	Xiphophorus_maculatus