EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000002843 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 165403 bases
Position: chrGeneScaffold_1612:133512-298914
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000002666	R3H	PF01424.22	2.7e-05	1	1
ENSTTRP00000002666	RNA_bind	PF08675.11	3.2e-26	1	1
ENSTTRP00000002666	CAF1	PF04857.20	8.1e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000002843	PARN-201	1884	-	ENSTTRP00000002666	627 (aa)	-	UPI00018B72B9

Gene Model

Click here to download ENSTTRG00000002843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000002843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000002843	PARN	100	89.082	ENSG00000140694	PARN	98	98.077	Homo_sapiens
ENSTTRG00000002843	PARN	100	89.082	ENSAMEG00000011208	PARN	99	89.082	Ailuropoda_melanoleuca
ENSTTRG00000002843	PARN	77	76.543	ENSACIG00000000619	parn	75	76.543	Amphilophus_citrinellus
ENSTTRG00000002843	PARN	91	69.138	ENSAOCG00000003465	parn	82	69.138	Amphiprion_ocellaris
ENSTTRG00000002843	PARN	68	78.753	ENSAPEG00000010661	parn	83	78.753	Amphiprion_percula
ENSTTRG00000002843	PARN	99	65.217	ENSATEG00000004661	parn	71	80.287	Anabas_testudineus
ENSTTRG00000002843	PARN	100	78.922	ENSAPLG00000013914	PARN	99	78.922	Anas_platyrhynchos
ENSTTRG00000002843	PARN	100	73.250	ENSACAG00000004973	PARN	99	73.250	Anolis_carolinensis
ENSTTRG00000002843	PARN	100	87.500	ENSANAG00000031516	PARN	98	98.077	Aotus_nancymaae
ENSTTRG00000002843	PARN	91	69.655	ENSACLG00000004742	parn	83	69.655	Astatotilapia_calliptera
ENSTTRG00000002843	PARN	90	69.611	ENSAMXG00000012390	parn	91	67.430	Astyanax_mexicanus
ENSTTRG00000002843	PARN	100	88.748	ENSBTAG00000018097	PARN	100	90.988	Bos_taurus
ENSTTRG00000002843	PARN	100	87.975	ENSCJAG00000015866	PARN	98	98.077	Callithrix_jacchus
ENSTTRG00000002843	PARN	100	89.699	ENSCAFG00000018795	PARN	99	89.699	Canis_familiaris
ENSTTRG00000002843	PARN	100	89.699	ENSCAFG00020024126	PARN	99	89.699	Canis_lupus_dingo
ENSTTRG00000002843	PARN	100	92.076	ENSCHIG00000018143	PARN	99	92.076	Capra_hircus
ENSTTRG00000002843	PARN	74	61.954	ENSCAPG00000007984	PARN	78	61.954	Cavia_aperea
ENSTTRG00000002843	PARN	100	85.261	ENSCPOG00000002263	PARN	99	85.261	Cavia_porcellus
ENSTTRG00000002843	PARN	100	87.975	ENSCCAG00000030367	PARN	98	98.077	Cebus_capucinus
ENSTTRG00000002843	PARN	51	36.957	ENSCATG00000033196	PNLDC1	68	36.957	Cercocebus_atys
ENSTTRG00000002843	PARN	90	96.708	ENSCATG00000041368	PARN	98	98.077	Cercocebus_atys
ENSTTRG00000002843	PARN	100	85.261	ENSCLAG00000015406	PARN	99	85.261	Chinchilla_lanigera
ENSTTRG00000002843	PARN	100	89.241	ENSCSAG00000008142	PARN	99	89.241	Chlorocebus_sabaeus
ENSTTRG00000002843	PARN	87	83.333	ENSCHOG00000007014	PARN	89	83.333	Choloepus_hoffmanni
ENSTTRG00000002843	PARN	89	79.501	ENSCPBG00000006609	PARN	97	79.516	Chrysemys_picta_bellii
ENSTTRG00000002843	PARN	76	44.930	ENSCING00000010142	-	94	44.930	Ciona_intestinalis
ENSTTRG00000002843	PARN	100	76.651	ENSCANG00000028849	-	98	98.077	Colobus_angolensis_palliatus
ENSTTRG00000002843	PARN	100	79.747	ENSCGRG00001012096	Parn	99	79.747	Cricetulus_griseus_chok1gshd
ENSTTRG00000002843	PARN	100	79.747	ENSCGRG00000004939	Parn	99	79.747	Cricetulus_griseus_crigri
ENSTTRG00000002843	PARN	77	76.386	ENSCSEG00000002064	parn	96	64.019	Cynoglossus_semilaevis
ENSTTRG00000002843	PARN	77	78.850	ENSCVAG00000014848	parn	71	78.850	Cyprinodon_variegatus
ENSTTRG00000002843	PARN	90	67.135	ENSDARG00000102634	parn	96	59.259	Danio_rerio
ENSTTRG00000002843	PARN	100	89.223	ENSDNOG00000000833	PARN	99	89.223	Dasypus_novemcinctus
ENSTTRG00000002843	PARN	73	94.922	ENSETEG00000014828	-	68	94.922	Echinops_telfairi
ENSTTRG00000002843	PARN	100	90.016	ENSEASG00005011400	PARN	99	90.016	Equus_asinus_asinus
ENSTTRG00000002843	PARN	100	89.699	ENSECAG00000017792	PARN	99	89.699	Equus_caballus
ENSTTRG00000002843	PARN	76	86.792	ENSEEUG00000010370	PARN	75	86.792	Erinaceus_europaeus
ENSTTRG00000002843	PARN	77	78.189	ENSELUG00000013139	parn	64	78.189	Esox_lucius
ENSTTRG00000002843	PARN	100	90.016	ENSFCAG00000044961	PARN	98	98.077	Felis_catus
ENSTTRG00000002843	PARN	100	78.130	ENSFALG00000003911	PARN	98	78.130	Ficedula_albicollis
ENSTTRG00000002843	PARN	58	30.000	ENSFALG00000012081	PNLDC1	70	30.000	Ficedula_albicollis
ENSTTRG00000002843	PARN	100	85.420	ENSFDAG00000009234	PARN	99	85.420	Fukomys_damarensis
ENSTTRG00000002843	PARN	77	71.663	ENSFHEG00000013738	parn	81	78.846	Fundulus_heteroclitus
ENSTTRG00000002843	PARN	77	77.207	ENSGMOG00000003231	parn	88	77.207	Gadus_morhua
ENSTTRG00000002843	PARN	100	77.215	ENSGALG00000003091	PARN	99	77.215	Gallus_gallus
ENSTTRG00000002843	PARN	77	78.645	ENSGAFG00000011061	parn	83	68.493	Gambusia_affinis
ENSTTRG00000002843	PARN	77	77.823	ENSGACG00000019501	parn	99	63.736	Gasterosteus_aculeatus
ENSTTRG00000002843	PARN	56	67.705	ENSGAGG00000023281	PARN	83	69.939	Gopherus_agassizii
ENSTTRG00000002843	PARN	97	89.088	ENSGGOG00000025224	PARN	98	98.077	Gorilla_gorilla
ENSTTRG00000002843	PARN	91	69.655	ENSHBUG00000017906	parn	82	77.347	Haplochromis_burtoni
ENSTTRG00000002843	PARN	100	84.945	ENSHGLG00000010886	PARN	99	84.945	Heterocephalus_glaber_female
ENSTTRG00000002843	PARN	100	84.945	ENSHGLG00100014659	PARN	99	84.945	Heterocephalus_glaber_male
ENSTTRG00000002843	PARN	77	73.922	ENSHCOG00000008683	parn	83	73.922	Hippocampus_comes
ENSTTRG00000002843	PARN	90	58.639	ENSIPUG00000012401	parn	83	58.639	Ictalurus_punctatus
ENSTTRG00000002843	PARN	100	87.322	ENSSTOG00000007519	PARN	99	87.322	Ictidomys_tridecemlineatus
ENSTTRG00000002843	PARN	100	83.994	ENSJJAG00000023049	Parn	99	83.994	Jaculus_jaculus
ENSTTRG00000002843	PARN	77	79.055	ENSKMAG00000009462	parn	72	79.055	Kryptolebias_marmoratus
ENSTTRG00000002843	PARN	90	69.110	ENSLBEG00000009167	parn	87	69.110	Labrus_bergylta
ENSTTRG00000002843	PARN	77	79.508	ENSLACG00000004207	PARN	98	76.978	Latimeria_chalumnae
ENSTTRG00000002843	PARN	92	69.880	ENSLOCG00000000715	parn	84	69.880	Lepisosteus_oculatus
ENSTTRG00000002843	PARN	100	88.273	ENSLAFG00000015036	PARN	99	88.273	Loxodonta_africana
ENSTTRG00000002843	PARN	100	84.252	ENSMFAG00000044852	PARN	98	98.077	Macaca_fascicularis
ENSTTRG00000002843	PARN	100	88.924	ENSMMUG00000018849	PARN	98	98.077	Macaca_mulatta
ENSTTRG00000002843	PARN	100	89.082	ENSMNEG00000045108	PARN	98	98.077	Macaca_nemestrina
ENSTTRG00000002843	PARN	100	88.924	ENSMLEG00000031743	PARN	98	98.077	Mandrillus_leucophaeus
ENSTTRG00000002843	PARN	77	78.645	ENSMAMG00000006939	parn	71	78.645	Mastacembelus_armatus
ENSTTRG00000002843	PARN	91	69.655	ENSMZEG00005013590	parn	94	68.917	Maylandia_zebra
ENSTTRG00000002843	PARN	96	77.176	ENSMGAG00000001004	PARN	95	77.176	Meleagris_gallopavo
ENSTTRG00000002843	PARN	100	74.062	ENSMAUG00000008025	Parn	99	74.062	Mesocricetus_auratus
ENSTTRG00000002843	PARN	100	88.906	ENSMICG00000016053	PARN	98	100.000	Microcebus_murinus
ENSTTRG00000002843	PARN	77	89.712	ENSMOCG00000022211	Parn	98	89.712	Microtus_ochrogaster
ENSTTRG00000002843	PARN	77	76.797	ENSMMOG00000011333	parn	79	76.797	Mola_mola
ENSTTRG00000002843	PARN	77	93.238	ENSMODG00000004915	PARN	98	93.238	Monodelphis_domestica
ENSTTRG00000002843	PARN	88	69.107	ENSMALG00000019426	parn	82	79.671	Monopterus_albus
ENSTTRG00000002843	PARN	100	80.666	MGP_CAROLIEiJ_G0020466	Parn	99	80.666	Mus_caroli
ENSTTRG00000002843	PARN	51	30.247	ENSMUSG00000073460	Pnldc1	95	30.247	Mus_musculus
ENSTTRG00000002843	PARN	100	80.666	ENSMUSG00000022685	Parn	91	93.333	Mus_musculus
ENSTTRG00000002843	PARN	100	80.507	MGP_PahariEiJ_G0016172	Parn	99	80.507	Mus_pahari
ENSTTRG00000002843	PARN	100	80.507	MGP_SPRETEiJ_G0021361	Parn	99	80.507	Mus_spretus
ENSTTRG00000002843	PARN	100	89.382	ENSMPUG00000014464	PARN	99	89.382	Mustela_putorius_furo
ENSTTRG00000002843	PARN	77	93.634	ENSMLUG00000005414	PARN	99	93.634	Myotis_lucifugus
ENSTTRG00000002843	PARN	77	76.797	ENSNBRG00000006805	parn	82	76.797	Neolamprologus_brichardi
ENSTTRG00000002843	PARN	100	88.766	ENSNLEG00000010241	PARN	98	98.077	Nomascus_leucogenys
ENSTTRG00000002843	PARN	100	58.003	ENSMEUG00000008178	-	100	58.003	Notamacropus_eugenii
ENSTTRG00000002843	PARN	100	81.141	ENSOPRG00000012187	PARN	100	81.141	Ochotona_princeps
ENSTTRG00000002843	PARN	100	76.498	ENSODEG00000001617	PARN	99	76.498	Octodon_degus
ENSTTRG00000002843	PARN	100	65.523	ENSONIG00000000151	parn	99	65.679	Oreochromis_niloticus
ENSTTRG00000002843	PARN	60	74.474	ENSOANG00000020155	-	97	74.737	Ornithorhynchus_anatinus
ENSTTRG00000002843	PARN	100	87.480	ENSOCUG00000000322	PARN	99	87.480	Oryctolagus_cuniculus
ENSTTRG00000002843	PARN	77	78.234	ENSORLG00020010313	parn	72	78.234	Oryzias_latipes_hni
ENSTTRG00000002843	PARN	77	78.029	ENSORLG00015000300	parn	72	78.029	Oryzias_latipes_hsok
ENSTTRG00000002843	PARN	77	78.029	ENSOMEG00000019555	parn	94	66.822	Oryzias_melastigma
ENSTTRG00000002843	PARN	77	92.213	ENSOGAG00000014626	PARN	99	92.213	Otolemur_garnettii
ENSTTRG00000002843	PARN	77	97.331	ENSOARG00000007574	PARN	99	97.331	Ovis_aries
ENSTTRG00000002843	PARN	100	88.766	ENSPPAG00000031438	PARN	98	98.077	Pan_paniscus
ENSTTRG00000002843	PARN	100	89.857	ENSPPRG00000018583	PARN	98	98.077	Panthera_pardus
ENSTTRG00000002843	PARN	100	89.857	ENSPTIG00000012135	PARN	98	98.077	Panthera_tigris_altaica
ENSTTRG00000002843	PARN	100	88.766	ENSPTRG00000007792	PARN	98	98.077	Pan_troglodytes
ENSTTRG00000002843	PARN	100	87.102	ENSPANG00000020099	PARN	98	98.077	Papio_anubis
ENSTTRG00000002843	PARN	90	69.542	ENSPKIG00000022807	parn	94	62.829	Paramormyrops_kingsleyae
ENSTTRG00000002843	PARN	99	78.846	ENSPSIG00000014804	PARN	100	78.510	Pelodiscus_sinensis
ENSTTRG00000002843	PARN	77	75.720	ENSPMGG00000014431	parn	67	76.337	Periophthalmus_magnuspinnatus
ENSTTRG00000002843	PARN	100	78.130	ENSPEMG00000018439	Parn	99	78.130	Peromyscus_maniculatus_bairdii
ENSTTRG00000002843	PARN	77	67.418	ENSPMAG00000003956	parn	93	67.418	Petromyzon_marinus
ENSTTRG00000002843	PARN	66	86.058	ENSPCIG00000001259	PARN	90	85.817	Phascolarctos_cinereus
ENSTTRG00000002843	PARN	77	78.645	ENSPFOG00000012823	parn	71	78.645	Poecilia_formosa
ENSTTRG00000002843	PARN	77	78.850	ENSPLAG00000006395	parn	71	78.850	Poecilia_latipinna
ENSTTRG00000002843	PARN	77	78.850	ENSPMEG00000007711	parn	71	78.850	Poecilia_mexicana
ENSTTRG00000002843	PARN	77	78.439	ENSPREG00000000147	parn	71	78.439	Poecilia_reticulata
ENSTTRG00000002843	PARN	100	88.801	ENSPPYG00000007123	PARN	99	88.801	Pongo_abelii
ENSTTRG00000002843	PARN	96	78.678	ENSPCAG00000001741	PARN	100	78.678	Procavia_capensis
ENSTTRG00000002843	PARN	100	86.371	ENSPCOG00000019292	PARN	98	100.000	Propithecus_coquereli
ENSTTRG00000002843	PARN	100	86.529	ENSPVAG00000002547	PARN	100	86.529	Pteropus_vampyrus
ENSTTRG00000002843	PARN	94	68.106	ENSPNYG00000006835	parn	94	66.312	Pundamilia_nyererei
ENSTTRG00000002843	PARN	83	70.019	ENSPNAG00000018905	parn	84	70.019	Pygocentrus_nattereri
ENSTTRG00000002843	PARN	51	30.247	ENSRNOG00000023140	Pnldc1	87	30.247	Rattus_norvegicus
ENSTTRG00000002843	PARN	100	78.274	ENSRNOG00000002912	Parn	98	86.869	Rattus_norvegicus
ENSTTRG00000002843	PARN	52	80.480	ENSRBIG00000018726	PARN	100	80.480	Rhinopithecus_bieti
ENSTTRG00000002843	PARN	52	80.480	ENSRROG00000011162	-	100	80.480	Rhinopithecus_roxellana
ENSTTRG00000002843	PARN	100	86.392	ENSSBOG00000034726	PARN	98	98.077	Saimiri_boliviensis_boliviensis
ENSTTRG00000002843	PARN	66	92.548	ENSSHAG00000008493	PARN	93	92.548	Sarcophilus_harrisii
ENSTTRG00000002843	PARN	96	67.763	ENSSFOG00015014165	parn	95	67.402	Scleropages_formosus
ENSTTRG00000002843	PARN	77	76.797	ENSSMAG00000000685	parn	79	71.779	Scophthalmus_maximus
ENSTTRG00000002843	PARN	77	79.055	ENSSDUG00000014555	parn	81	69.043	Seriola_dumerili
ENSTTRG00000002843	PARN	92	85.665	ENSSARG00000014339	PARN	100	85.665	Sorex_araneus
ENSTTRG00000002843	PARN	100	79.556	ENSSPUG00000007719	PARN	99	79.556	Sphenodon_punctatus
ENSTTRG00000002843	PARN	91	70.345	ENSSPAG00000007095	parn	83	70.345	Stegastes_partitus
ENSTTRG00000002843	PARN	100	89.699	ENSSSCG00000007878	PARN	88	89.699	Sus_scrofa
ENSTTRG00000002843	PARN	100	78.288	ENSTGUG00000004971	PARN	99	78.288	Taeniopygia_guttata
ENSTTRG00000002843	PARN	55	30.168	ENSTGUG00000011418	PNLDC1	68	30.168	Taeniopygia_guttata
ENSTTRG00000002843	PARN	100	64.476	ENSTNIG00000008252	parn	99	64.632	Tetraodon_nigroviridis
ENSTTRG00000002843	PARN	92	73.748	ENSTBEG00000010407	PARN	100	73.748	Tupaia_belangeri
ENSTTRG00000002843	PARN	68	84.651	ENSUAMG00000008283	PARN	94	80.324	Ursus_americanus
ENSTTRG00000002843	PARN	100	89.540	ENSUMAG00000004527	PARN	99	89.540	Ursus_maritimus
ENSTTRG00000002843	PARN	97	86.482	ENSVPAG00000008968	PARN	100	86.482	Vicugna_pacos
ENSTTRG00000002843	PARN	100	90.174	ENSVVUG00000019509	PARN	99	90.174	Vulpes_vulpes
ENSTTRG00000002843	PARN	100	70.206	ENSXETG00000010994	parn	92	81.481	Xenopus_tropicalis
ENSTTRG00000002843	PARN	90	64.991	ENSXCOG00000015990	parn	95	64.395	Xiphophorus_couchianus
ENSTTRG00000002843	PARN	92	68.143	ENSXMAG00000014783	parn	83	68.143	Xiphophorus_maculatus