EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000003006 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 11234 bases
Position: chrGeneScaffold_3277:429620-440853
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000002820	PPR	PF01535.20	6.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000003005	-	2094	-	ENSTTRP00000002820	697 (aa)	-	UPI00018B7E2A

Gene Model

Click here to download ENSTTRG00000003006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000003006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000003006	-	100	74.716	ENSG00000106246	PTCD1	100	74.716	Homo_sapiens
ENSTTRG00000003006	-	100	74.716	ENSG00000248919	ATP5MF-PTCD1	93	74.716	Homo_sapiens
ENSTTRG00000003006	-	79	47.266	ENSAPOG00000010679	ptcd1	85	46.726	Acanthochromis_polyacanthus
ENSTTRG00000003006	-	100	80.453	ENSAMEG00000006224	-	93	80.453	Ailuropoda_melanoleuca
ENSTTRG00000003006	-	90	48.107	ENSACIG00000017861	ptcd1	89	48.107	Amphilophus_citrinellus
ENSTTRG00000003006	-	85	47.941	ENSAOCG00000020741	-	82	47.941	Amphiprion_ocellaris
ENSTTRG00000003006	-	81	47.232	ENSAOCG00000022617	ptcd1	83	47.232	Amphiprion_ocellaris
ENSTTRG00000003006	-	95	45.045	ENSAPEG00000022632	ptcd1	92	45.045	Amphiprion_percula
ENSTTRG00000003006	-	88	49.675	ENSATEG00000007016	ptcd1	83	49.675	Anabas_testudineus
ENSTTRG00000003006	-	85	58.970	ENSAPLG00000006862	-	93	58.785	Anas_platyrhynchos
ENSTTRG00000003006	-	100	53.771	ENSACAG00000012871	-	93	53.771	Anolis_carolinensis
ENSTTRG00000003006	-	98	75.436	ENSANAG00000035790	-	100	75.436	Aotus_nancymaae
ENSTTRG00000003006	-	83	48.464	ENSACLG00000002824	ptcd1	80	48.464	Astatotilapia_calliptera
ENSTTRG00000003006	-	87	47.031	ENSAMXG00000037292	ptcd1	88	47.188	Astyanax_mexicanus
ENSTTRG00000003006	-	100	84.495	ENSBTAG00000020440	-	87	84.495	Bos_taurus
ENSTTRG00000003006	-	100	75.426	ENSCJAG00000015815	-	100	75.426	Callithrix_jacchus
ENSTTRG00000003006	-	100	78.470	ENSCAFG00000015055	-	93	78.470	Canis_familiaris
ENSTTRG00000003006	-	100	78.470	ENSCAFG00020014480	-	93	78.470	Canis_lupus_dingo
ENSTTRG00000003006	-	100	83.830	ENSCHIG00000027000	-	99	83.830	Capra_hircus
ENSTTRG00000003006	-	100	78.298	ENSTSYG00000029495	-	100	78.298	Carlito_syrichta
ENSTTRG00000003006	-	94	75.532	ENSCAPG00000014660	-	100	75.532	Cavia_aperea
ENSTTRG00000003006	-	100	74.894	ENSCPOG00000001780	-	100	74.894	Cavia_porcellus
ENSTTRG00000003006	-	100	75.461	ENSCCAG00000034025	-	100	75.461	Cebus_capucinus
ENSTTRG00000003006	-	99	75.645	ENSCATG00000040859	-	99	75.788	Cercocebus_atys
ENSTTRG00000003006	-	98	76.445	ENSCLAG00000006354	-	100	75.745	Chinchilla_lanigera
ENSTTRG00000003006	-	91	74.264	ENSCSAG00000017794	-	95	74.419	Chlorocebus_sabaeus
ENSTTRG00000003006	-	97	55.289	ENSCPBG00000020866	-	94	55.571	Chrysemys_picta_bellii
ENSTTRG00000003006	-	100	75.391	ENSCANG00000023441	-	100	75.533	Colobus_angolensis_palliatus
ENSTTRG00000003006	-	99	73.466	ENSCGRG00001023686	Ptcd1	99	73.466	Cricetulus_griseus_chok1gshd
ENSTTRG00000003006	-	99	72.766	ENSCGRG00000015031	Ptcd1	99	72.766	Cricetulus_griseus_crigri
ENSTTRG00000003006	-	89	45.048	ENSCSEG00000002378	ptcd1	89	44.651	Cynoglossus_semilaevis
ENSTTRG00000003006	-	84	47.871	ENSCVAG00000015826	ptcd1	81	47.871	Cyprinodon_variegatus
ENSTTRG00000003006	-	86	46.833	ENSCVAG00000003621	ptcd1	88	46.833	Cyprinodon_variegatus
ENSTTRG00000003006	-	93	47.788	ENSDARG00000076176	ptcd1	97	47.788	Danio_rerio
ENSTTRG00000003006	-	100	76.479	ENSDNOG00000009957	-	100	76.479	Dasypus_novemcinctus
ENSTTRG00000003006	-	98	73.149	ENSDORG00000000740	Ptcd1	99	73.149	Dipodomys_ordii
ENSTTRG00000003006	-	88	41.053	ENSEBUG00000014515	ptcd1	97	42.261	Eptatretus_burgeri
ENSTTRG00000003006	-	100	82.394	ENSEASG00005002480	-	100	82.394	Equus_asinus_asinus
ENSTTRG00000003006	-	100	82.958	ENSECAG00000016617	-	100	82.958	Equus_caballus
ENSTTRG00000003006	-	90	45.152	ENSELUG00000016517	ptcd1	86	45.152	Esox_lucius
ENSTTRG00000003006	-	100	81.161	ENSFCAG00000015069	-	100	81.161	Felis_catus
ENSTTRG00000003006	-	87	57.614	ENSFALG00000013803	-	88	56.966	Ficedula_albicollis
ENSTTRG00000003006	-	100	75.461	ENSFDAG00000006393	-	100	75.461	Fukomys_damarensis
ENSTTRG00000003006	-	76	48.689	ENSFHEG00000012491	ptcd1	89	48.689	Fundulus_heteroclitus
ENSTTRG00000003006	-	82	47.049	ENSGMOG00000007639	ptcd1	91	47.049	Gadus_morhua
ENSTTRG00000003006	-	86	57.097	ENSGALG00000004711	-	88	57.120	Gallus_gallus
ENSTTRG00000003006	-	85	47.533	ENSGAFG00000013175	ptcd1	84	47.533	Gambusia_affinis
ENSTTRG00000003006	-	86	49.674	ENSGACG00000016607	ptcd1	91	49.837	Gasterosteus_aculeatus
ENSTTRG00000003006	-	88	54.803	ENSGAGG00000021832	-	93	54.803	Gopherus_agassizii
ENSTTRG00000003006	-	99	74.680	ENSGGOG00000015123	-	99	74.680	Gorilla_gorilla
ENSTTRG00000003006	-	83	48.480	ENSHBUG00000018275	ptcd1	80	48.480	Haplochromis_burtoni
ENSTTRG00000003006	-	100	76.629	ENSHGLG00000017621	-	100	76.629	Heterocephalus_glaber_female
ENSTTRG00000003006	-	100	76.629	ENSHGLG00100007218	-	100	76.629	Heterocephalus_glaber_male
ENSTTRG00000003006	-	84	47.251	ENSHCOG00000010784	ptcd1	82	47.423	Hippocampus_comes
ENSTTRG00000003006	-	100	75.915	ENSSTOG00000001682	-	100	75.915	Ictidomys_tridecemlineatus
ENSTTRG00000003006	-	100	71.977	ENSJJAG00000000319	Ptcd1	100	72.546	Jaculus_jaculus
ENSTTRG00000003006	-	86	47.650	ENSKMAG00000008708	ptcd1	83	47.974	Kryptolebias_marmoratus
ENSTTRG00000003006	-	90	46.445	ENSLBEG00000008061	ptcd1	86	47.310	Labrus_bergylta
ENSTTRG00000003006	-	86	57.635	ENSLACG00000011172	ptcd1	84	57.964	Latimeria_chalumnae
ENSTTRG00000003006	-	89	52.067	ENSLOCG00000004833	ptcd1	97	52.472	Lepisosteus_oculatus
ENSTTRG00000003006	-	100	70.687	ENSLAFG00000002588	-	100	71.449	Loxodonta_africana
ENSTTRG00000003006	-	99	75.358	ENSMFAG00000041324	-	99	75.501	Macaca_fascicularis
ENSTTRG00000003006	-	99	75.215	ENSMMUG00000030408	-	99	75.358	Macaca_mulatta
ENSTTRG00000003006	-	99	75.501	ENSMNEG00000043786	-	99	75.645	Macaca_nemestrina
ENSTTRG00000003006	-	99	56.590	ENSMLEG00000031179	-	99	57.020	Mandrillus_leucophaeus
ENSTTRG00000003006	-	90	48.903	ENSMAMG00000007623	ptcd1	86	48.903	Mastacembelus_armatus
ENSTTRG00000003006	-	83	48.464	ENSMZEG00005012722	ptcd1	80	48.464	Maylandia_zebra
ENSTTRG00000003006	-	98	54.314	ENSMGAG00000004211	-	92	54.443	Meleagris_gallopavo
ENSTTRG00000003006	-	100	77.872	ENSMICG00000017428	-	100	77.872	Microcebus_murinus
ENSTTRG00000003006	-	87	47.078	ENSMMOG00000020243	ptcd1	92	47.240	Mola_mola
ENSTTRG00000003006	-	99	57.047	ENSMODG00000001350	-	99	57.047	Monodelphis_domestica
ENSTTRG00000003006	-	87	49.013	ENSMALG00000018442	ptcd1	83	49.013	Monopterus_albus
ENSTTRG00000003006	-	99	75.000	MGP_CAROLIEiJ_G0028011	Ptcd1	99	75.144	Mus_caroli
ENSTTRG00000003006	-	99	73.420	ENSMUSG00000029624	Ptcd1	99	73.707	Mus_musculus
ENSTTRG00000003006	-	99	74.138	MGP_PahariEiJ_G0024580	Ptcd1	99	74.282	Mus_pahari
ENSTTRG00000003006	-	99	74.713	MGP_SPRETEiJ_G0029012	Ptcd1	99	74.856	Mus_spretus
ENSTTRG00000003006	-	100	78.470	ENSMPUG00000016518	-	100	79.037	Mustela_putorius_furo
ENSTTRG00000003006	-	100	82.394	ENSMLUG00000010994	-	94	82.535	Myotis_lucifugus
ENSTTRG00000003006	-	87	48.287	ENSNBRG00000010079	ptcd1	86	48.287	Neolamprologus_brichardi
ENSTTRG00000003006	-	99	78.493	ENSNLEG00000011060	-	99	78.493	Nomascus_leucogenys
ENSTTRG00000003006	-	97	59.687	ENSMEUG00000006930	-	99	59.687	Notamacropus_eugenii
ENSTTRG00000003006	-	90	74.651	ENSOPRG00000013647	-	90	74.651	Ochotona_princeps
ENSTTRG00000003006	-	83	48.136	ENSONIG00000003168	ptcd1	95	48.136	Oreochromis_niloticus
ENSTTRG00000003006	-	81	55.208	ENSOANG00000007728	-	75	55.208	Ornithorhynchus_anatinus
ENSTTRG00000003006	-	99	73.692	ENSOCUG00000010584	-	98	73.692	Oryctolagus_cuniculus
ENSTTRG00000003006	-	89	46.772	ENSORLG00000009275	ptcd1	88	46.772	Oryzias_latipes
ENSTTRG00000003006	-	89	46.890	ENSORLG00020000988	ptcd1	88	46.890	Oryzias_latipes_hni
ENSTTRG00000003006	-	89	46.463	ENSORLG00015010557	ptcd1	88	46.463	Oryzias_latipes_hsok
ENSTTRG00000003006	-	85	48.154	ENSOMEG00000020627	ptcd1	87	48.154	Oryzias_melastigma
ENSTTRG00000003006	-	99	75.393	ENSOGAG00000010877	-	100	75.393	Otolemur_garnettii
ENSTTRG00000003006	-	100	78.249	ENSOARG00000018676	-	100	78.249	Ovis_aries
ENSTTRG00000003006	-	100	74.290	ENSPPAG00000036024	-	100	74.432	Pan_paniscus
ENSTTRG00000003006	-	100	81.909	ENSPPRG00000003478	-	100	81.909	Panthera_pardus
ENSTTRG00000003006	-	100	74.148	ENSPTRG00000019452	-	100	74.290	Pan_troglodytes
ENSTTRG00000003006	-	99	75.645	ENSPANG00000016730	-	99	75.788	Papio_anubis
ENSTTRG00000003006	-	94	49.925	ENSPKIG00000014215	ptcd1	94	50.225	Paramormyrops_kingsleyae
ENSTTRG00000003006	-	85	58.054	ENSPSIG00000011184	-	100	58.054	Pelodiscus_sinensis
ENSTTRG00000003006	-	73	41.221	ENSPMAG00000009667	ptcd1	100	41.221	Petromyzon_marinus
ENSTTRG00000003006	-	95	59.768	ENSPCIG00000024778	-	92	59.913	Phascolarctos_cinereus
ENSTTRG00000003006	-	87	47.267	ENSPFOG00000004458	ptcd1	84	47.267	Poecilia_formosa
ENSTTRG00000003006	-	85	47.541	ENSPLAG00000011051	ptcd1	84	47.541	Poecilia_latipinna
ENSTTRG00000003006	-	87	47.106	ENSPMEG00000020547	ptcd1	84	47.106	Poecilia_mexicana
ENSTTRG00000003006	-	84	47.761	ENSPREG00000000059	ptcd1	84	47.533	Poecilia_reticulata
ENSTTRG00000003006	-	94	75.417	ENSPPYG00000017377	-	99	75.417	Pongo_abelii
ENSTTRG00000003006	-	81	80.142	ENSPCAG00000001852	-	89	80.142	Procavia_capensis
ENSTTRG00000003006	-	100	78.723	ENSPCOG00000018596	-	100	78.723	Propithecus_coquereli
ENSTTRG00000003006	-	68	87.000	ENSPVAG00000007529	-	73	87.000	Pteropus_vampyrus
ENSTTRG00000003006	-	83	48.814	ENSPNYG00000019993	ptcd1	80	48.814	Pundamilia_nyererei
ENSTTRG00000003006	-	88	50.399	ENSPNAG00000014931	ptcd1	92	49.387	Pygocentrus_nattereri
ENSTTRG00000003006	-	98	74.282	ENSRNOG00000000987	Ptcd1	98	74.425	Rattus_norvegicus
ENSTTRG00000003006	-	99	75.575	ENSRBIG00000043393	-	99	75.718	Rhinopithecus_bieti
ENSTTRG00000003006	-	99	75.718	ENSRROG00000036420	-	99	75.862	Rhinopithecus_roxellana
ENSTTRG00000003006	-	100	75.071	ENSSBOG00000024114	-	100	75.071	Saimiri_boliviensis_boliviensis
ENSTTRG00000003006	-	98	55.510	ENSSHAG00000011376	-	98	60.276	Sarcophilus_harrisii
ENSTTRG00000003006	-	90	50.077	ENSSFOG00015007909	ptcd1	86	50.691	Scleropages_formosus
ENSTTRG00000003006	-	87	46.591	ENSSMAG00000000218	ptcd1	95	47.078	Scophthalmus_maximus
ENSTTRG00000003006	-	97	44.913	ENSSDUG00000015671	ptcd1	95	44.913	Seriola_dumerili
ENSTTRG00000003006	-	95	44.802	ENSSLDG00000014261	ptcd1	93	44.802	Seriola_lalandi_dorsalis
ENSTTRG00000003006	-	93	52.770	ENSSPUG00000003540	-	91	53.061	Sphenodon_punctatus
ENSTTRG00000003006	-	86	49.013	ENSSPAG00000011049	ptcd1	83	49.013	Stegastes_partitus
ENSTTRG00000003006	-	92	84.568	ENSSSCG00000007622	-	99	84.115	Sus_scrofa
ENSTTRG00000003006	-	87	58.699	ENSTGUG00000007563	-	99	58.699	Taeniopygia_guttata
ENSTTRG00000003006	-	85	47.306	ENSTRUG00000013471	ptcd1	81	47.306	Takifugu_rubripes
ENSTTRG00000003006	-	90	46.457	ENSTNIG00000008271	ptcd1	89	46.457	Tetraodon_nigroviridis
ENSTTRG00000003006	-	100	75.141	ENSTBEG00000011021	-	100	75.141	Tupaia_belangeri
ENSTTRG00000003006	-	100	79.887	ENSUAMG00000008049	-	100	79.887	Ursus_americanus
ENSTTRG00000003006	-	99	78.236	ENSVVUG00000008836	-	100	78.236	Vulpes_vulpes
ENSTTRG00000003006	-	89	50.390	ENSXETG00000009891	ptcd1	92	49.696	Xenopus_tropicalis
ENSTTRG00000003006	-	87	47.769	ENSXMAG00000015540	ptcd1	84	47.769	Xiphophorus_maculatus