EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000003246 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 12261 bases
Position: chrGeneScaffold_1464:148055-160315
Accession: 17349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000003043	PRP4	PF08799.11	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000003246	PRPF4-201	1359	-	ENSTTRP00000003043	452 (aa)	-	UPI00018B63D4

Gene Model

Click here to download ENSTTRG00000003246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000003246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000003246	PRPF4	85	98.993	ENSG00000136875	PRPF4	82	98.993	Homo_sapiens
ENSTTRG00000003246	PRPF4	79	79.866	ENSAPOG00000014132	prpf4	87	79.866	Acanthochromis_polyacanthus
ENSTTRG00000003246	PRPF4	85	99.329	ENSAMEG00000013048	PRPF4	80	99.329	Ailuropoda_melanoleuca
ENSTTRG00000003246	PRPF4	85	79.195	ENSACIG00000005579	prpf4	89	79.195	Amphilophus_citrinellus
ENSTTRG00000003246	PRPF4	85	78.859	ENSAOCG00000005457	prpf4	89	78.859	Amphiprion_ocellaris
ENSTTRG00000003246	PRPF4	85	78.523	ENSAPEG00000000776	prpf4	89	78.523	Amphiprion_percula
ENSTTRG00000003246	PRPF4	85	77.852	ENSATEG00000023013	prpf4	89	77.852	Anabas_testudineus
ENSTTRG00000003246	PRPF4	85	93.023	ENSAPLG00000006534	PRPF4	79	93.023	Anas_platyrhynchos
ENSTTRG00000003246	PRPF4	85	93.023	ENSACAG00000015110	PRPF4	82	93.023	Anolis_carolinensis
ENSTTRG00000003246	PRPF4	85	99.329	ENSANAG00000022464	PRPF4	79	99.329	Aotus_nancymaae
ENSTTRG00000003246	PRPF4	85	78.859	ENSACLG00000019031	prpf4	89	78.859	Astatotilapia_calliptera
ENSTTRG00000003246	PRPF4	84	82.558	ENSAMXG00000006756	prpf4	88	82.558	Astyanax_mexicanus
ENSTTRG00000003246	PRPF4	85	98.837	ENSBTAG00000004571	PRPF4	82	98.837	Bos_taurus
ENSTTRG00000003246	PRPF4	84	43.373	WBGene00007972	prp-4	91	43.373	Caenorhabditis_elegans
ENSTTRG00000003246	PRPF4	85	99.329	ENSCJAG00000017856	PRPF4	82	99.329	Callithrix_jacchus
ENSTTRG00000003246	PRPF4	85	99.329	ENSCAFG00000003224	PRPF4	79	99.329	Canis_familiaris
ENSTTRG00000003246	PRPF4	85	99.329	ENSCAFG00020022637	PRPF4	82	99.329	Canis_lupus_dingo
ENSTTRG00000003246	PRPF4	85	99.329	ENSCHIG00000024648	-	82	99.329	Capra_hircus
ENSTTRG00000003246	PRPF4	85	99.329	ENSTSYG00000010366	PRPF4	82	99.329	Carlito_syrichta
ENSTTRG00000003246	PRPF4	75	90.604	ENSCAPG00000008935	PRPF4	79	90.604	Cavia_aperea
ENSTTRG00000003246	PRPF4	85	99.329	ENSCPOG00000010747	-	80	99.329	Cavia_porcellus
ENSTTRG00000003246	PRPF4	85	94.295	ENSCPOG00000014729	-	73	94.295	Cavia_porcellus
ENSTTRG00000003246	PRPF4	85	98.993	ENSCCAG00000028990	PRPF4	82	98.993	Cebus_capucinus
ENSTTRG00000003246	PRPF4	85	99.329	ENSCATG00000021552	PRPF4	82	99.329	Cercocebus_atys
ENSTTRG00000003246	PRPF4	85	99.329	ENSCLAG00000013448	PRPF4	82	99.329	Chinchilla_lanigera
ENSTTRG00000003246	PRPF4	85	98.837	ENSCHOG00000007233	PRPF4	94	98.837	Choloepus_hoffmanni
ENSTTRG00000003246	PRPF4	85	95.349	ENSCPBG00000019136	PRPF4	61	95.349	Chrysemys_picta_bellii
ENSTTRG00000003246	PRPF4	84	61.628	ENSCING00000001299	-	88	61.628	Ciona_intestinalis
ENSTTRG00000003246	PRPF4	84	61.628	ENSCSAVG00000009178	-	99	61.628	Ciona_savignyi
ENSTTRG00000003246	PRPF4	85	99.329	ENSCANG00000003246	PRPF4	82	99.329	Colobus_angolensis_palliatus
ENSTTRG00000003246	PRPF4	85	98.993	ENSCGRG00001016992	Prpf4	82	98.993	Cricetulus_griseus_chok1gshd
ENSTTRG00000003246	PRPF4	85	98.993	ENSCGRG00000017560	Prpf4	82	98.993	Cricetulus_griseus_crigri
ENSTTRG00000003246	PRPF4	85	78.523	ENSCSEG00000020451	prpf4	89	78.523	Cynoglossus_semilaevis
ENSTTRG00000003246	PRPF4	85	84.884	ENSDARG00000067639	prpf4	89	84.884	Danio_rerio
ENSTTRG00000003246	PRPF4	85	99.329	ENSDNOG00000013203	PRPF4	82	99.329	Dasypus_novemcinctus
ENSTTRG00000003246	PRPF4	85	98.993	ENSDORG00000026275	Prpf4	82	98.993	Dipodomys_ordii
ENSTTRG00000003246	PRPF4	84	57.831	FBgn0036733	U4-U6-60K	81	57.831	Drosophila_melanogaster
ENSTTRG00000003246	PRPF4	85	98.658	ENSETEG00000020389	PRPF4	86	98.658	Echinops_telfairi
ENSTTRG00000003246	PRPF4	66	74.161	ENSEBUG00000015229	prpf4	74	74.832	Eptatretus_burgeri
ENSTTRG00000003246	PRPF4	85	99.329	ENSEASG00005022678	PRPF4	82	99.329	Equus_asinus_asinus
ENSTTRG00000003246	PRPF4	85	99.329	ENSECAG00000007072	PRPF4	82	99.329	Equus_caballus
ENSTTRG00000003246	PRPF4	63	100.000	ENSEEUG00000007480	PRPF4	63	100.000	Erinaceus_europaeus
ENSTTRG00000003246	PRPF4	85	81.395	ENSELUG00000007510	prpf4	89	81.395	Esox_lucius
ENSTTRG00000003246	PRPF4	85	99.329	ENSFCAG00000005514	PRPF4	82	99.329	Felis_catus
ENSTTRG00000003246	PRPF4	71	91.275	ENSFALG00000005423	PRPF4	62	91.275	Ficedula_albicollis
ENSTTRG00000003246	PRPF4	85	99.329	ENSFDAG00000005839	PRPF4	82	99.329	Fukomys_damarensis
ENSTTRG00000003246	PRPF4	85	78.188	ENSFHEG00000001300	prpf4	89	78.188	Fundulus_heteroclitus
ENSTTRG00000003246	PRPF4	85	93.023	ENSGALG00000008857	PRPF4	79	93.023	Gallus_gallus
ENSTTRG00000003246	PRPF4	60	76.384	ENSGAFG00000012164	prpf4	56	76.384	Gambusia_affinis
ENSTTRG00000003246	PRPF4	85	73.256	ENSGACG00000015476	prpf4	89	73.256	Gasterosteus_aculeatus
ENSTTRG00000003246	PRPF4	85	96.512	ENSGAGG00000025029	PRPF4	79	96.512	Gopherus_agassizii
ENSTTRG00000003246	PRPF4	85	98.993	ENSGGOG00000006943	PRPF4	82	98.993	Gorilla_gorilla
ENSTTRG00000003246	PRPF4	85	78.859	ENSHBUG00000000562	prpf4	89	78.859	Haplochromis_burtoni
ENSTTRG00000003246	PRPF4	82	87.333	ENSHGLG00000016628	-	74	89.000	Heterocephalus_glaber_female
ENSTTRG00000003246	PRPF4	85	98.993	ENSHGLG00000015191	PRPF4	82	98.993	Heterocephalus_glaber_female
ENSTTRG00000003246	PRPF4	85	89.535	ENSHGLG00000003838	-	74	89.535	Heterocephalus_glaber_female
ENSTTRG00000003246	PRPF4	85	89.535	ENSHGLG00100005571	-	74	89.535	Heterocephalus_glaber_male
ENSTTRG00000003246	PRPF4	85	82.558	ENSIPUG00000017956	PRPF4	89	82.558	Ictalurus_punctatus
ENSTTRG00000003246	PRPF4	85	98.837	ENSSTOG00000027833	PRPF4	82	98.837	Ictidomys_tridecemlineatus
ENSTTRG00000003246	PRPF4	85	98.993	ENSJJAG00000008838	Prpf4	82	98.993	Jaculus_jaculus
ENSTTRG00000003246	PRPF4	85	78.188	ENSKMAG00000013236	prpf4	89	78.188	Kryptolebias_marmoratus
ENSTTRG00000003246	PRPF4	85	77.517	ENSLBEG00000020611	prpf4	82	77.517	Labrus_bergylta
ENSTTRG00000003246	PRPF4	85	89.535	ENSLACG00000016317	PRPF4	87	89.535	Latimeria_chalumnae
ENSTTRG00000003246	PRPF4	85	83.557	ENSLOCG00000000581	prpf4	89	83.557	Lepisosteus_oculatus
ENSTTRG00000003246	PRPF4	85	99.329	ENSLAFG00000018225	PRPF4	82	99.329	Loxodonta_africana
ENSTTRG00000003246	PRPF4	85	99.329	ENSMFAG00000039397	PRPF4	80	99.329	Macaca_fascicularis
ENSTTRG00000003246	PRPF4	85	99.329	ENSMMUG00000005844	PRPF4	82	99.329	Macaca_mulatta
ENSTTRG00000003246	PRPF4	85	98.837	ENSMNEG00000033737	PRPF4	80	98.837	Macaca_nemestrina
ENSTTRG00000003246	PRPF4	85	99.329	ENSMLEG00000040284	PRPF4	82	99.329	Mandrillus_leucophaeus
ENSTTRG00000003246	PRPF4	85	78.859	ENSMAMG00000020141	prpf4	89	78.859	Mastacembelus_armatus
ENSTTRG00000003246	PRPF4	85	78.859	ENSMZEG00005023205	prpf4	89	78.859	Maylandia_zebra
ENSTTRG00000003246	PRPF4	85	93.023	ENSMGAG00000001796	PRPF4	79	93.023	Meleagris_gallopavo
ENSTTRG00000003246	PRPF4	85	98.658	ENSMAUG00000018022	Prpf4	82	98.658	Mesocricetus_auratus
ENSTTRG00000003246	PRPF4	85	98.658	ENSMICG00000015022	PRPF4	82	98.658	Microcebus_murinus
ENSTTRG00000003246	PRPF4	85	98.322	ENSMOCG00000018273	Prpf4	82	98.322	Microtus_ochrogaster
ENSTTRG00000003246	PRPF4	85	76.174	ENSMMOG00000021177	prpf4	89	76.174	Mola_mola
ENSTTRG00000003246	PRPF4	85	98.837	ENSMODG00000025096	-	79	98.837	Monodelphis_domestica
ENSTTRG00000003246	PRPF4	85	97.674	ENSMODG00000004444	-	81	97.674	Monodelphis_domestica
ENSTTRG00000003246	PRPF4	85	78.523	ENSMALG00000013624	prpf4	89	78.523	Monopterus_albus
ENSTTRG00000003246	PRPF4	85	98.993	MGP_CAROLIEiJ_G0026078	Prpf4	82	98.993	Mus_caroli
ENSTTRG00000003246	PRPF4	85	98.993	ENSMUSG00000066148	Prpf4	82	98.993	Mus_musculus
ENSTTRG00000003246	PRPF4	85	98.658	MGP_PahariEiJ_G0028413	Prpf4	82	98.658	Mus_pahari
ENSTTRG00000003246	PRPF4	85	98.993	MGP_SPRETEiJ_G0027042	Prpf4	82	98.993	Mus_spretus
ENSTTRG00000003246	PRPF4	85	99.329	ENSMPUG00000007883	PRPF4	82	99.329	Mustela_putorius_furo
ENSTTRG00000003246	PRPF4	85	98.993	ENSMLUG00000015309	-	79	98.993	Myotis_lucifugus
ENSTTRG00000003246	PRPF4	85	97.315	ENSMLUG00000008626	-	78	97.315	Myotis_lucifugus
ENSTTRG00000003246	PRPF4	85	98.837	ENSNGAG00000000468	Prpf4	81	98.837	Nannospalax_galili
ENSTTRG00000003246	PRPF4	85	79.195	ENSNBRG00000007972	prpf4	89	79.195	Neolamprologus_brichardi
ENSTTRG00000003246	PRPF4	85	99.329	ENSNLEG00000016647	PRPF4	82	99.329	Nomascus_leucogenys
ENSTTRG00000003246	PRPF4	85	98.837	ENSMEUG00000013256	PRPF4	83	98.837	Notamacropus_eugenii
ENSTTRG00000003246	PRPF4	85	98.993	ENSOPRG00000005302	PRPF4	82	98.993	Ochotona_princeps
ENSTTRG00000003246	PRPF4	85	99.329	ENSODEG00000018147	PRPF4	82	99.329	Octodon_degus
ENSTTRG00000003246	PRPF4	85	78.859	ENSONIG00000012671	prpf4	89	78.859	Oreochromis_niloticus
ENSTTRG00000003246	PRPF4	85	98.993	ENSOCUG00000005046	PRPF4	82	98.993	Oryctolagus_cuniculus
ENSTTRG00000003246	PRPF4	85	78.523	ENSORLG00000019641	prpf4	90	78.523	Oryzias_latipes
ENSTTRG00000003246	PRPF4	85	78.523	ENSORLG00020019438	prpf4	90	78.523	Oryzias_latipes_hni
ENSTTRG00000003246	PRPF4	85	78.188	ENSOMEG00000020941	prpf4	89	78.188	Oryzias_melastigma
ENSTTRG00000003246	PRPF4	85	96.512	ENSOGAG00000007802	PRPF4	80	96.512	Otolemur_garnettii
ENSTTRG00000003246	PRPF4	85	99.329	ENSOARG00000006319	PRPF4	79	99.329	Ovis_aries
ENSTTRG00000003246	PRPF4	85	98.993	ENSPPAG00000041797	PRPF4	82	98.993	Pan_paniscus
ENSTTRG00000003246	PRPF4	85	99.329	ENSPPRG00000014360	PRPF4	82	99.329	Panthera_pardus
ENSTTRG00000003246	PRPF4	85	99.329	ENSPTIG00000009574	PRPF4	82	99.329	Panthera_tigris_altaica
ENSTTRG00000003246	PRPF4	85	98.993	ENSPTRG00000021274	PRPF4	82	98.993	Pan_troglodytes
ENSTTRG00000003246	PRPF4	85	99.329	ENSPANG00000025776	PRPF4	78	99.329	Papio_anubis
ENSTTRG00000003246	PRPF4	85	82.558	ENSPKIG00000017259	prpf4	90	82.558	Paramormyrops_kingsleyae
ENSTTRG00000003246	PRPF4	85	96.512	ENSPSIG00000010713	PRPF4	75	96.512	Pelodiscus_sinensis
ENSTTRG00000003246	PRPF4	82	79.070	ENSPMGG00000000997	prpf4	84	79.070	Periophthalmus_magnuspinnatus
ENSTTRG00000003246	PRPF4	85	98.993	ENSPEMG00000024115	Prpf4	82	98.993	Peromyscus_maniculatus_bairdii
ENSTTRG00000003246	PRPF4	85	98.837	ENSPCIG00000003821	PRPF4	83	98.837	Phascolarctos_cinereus
ENSTTRG00000003246	PRPF4	85	75.581	ENSPFOG00000013524	prpf4	83	75.581	Poecilia_formosa
ENSTTRG00000003246	PRPF4	60	74.170	ENSPLAG00000011620	prpf4	81	72.325	Poecilia_latipinna
ENSTTRG00000003246	PRPF4	62	76.868	ENSPMEG00000006813	prpf4	83	76.868	Poecilia_mexicana
ENSTTRG00000003246	PRPF4	85	98.993	ENSPCAG00000002561	PRPF4	83	98.993	Procavia_capensis
ENSTTRG00000003246	PRPF4	85	98.993	ENSPCOG00000011975	PRPF4	82	98.993	Propithecus_coquereli
ENSTTRG00000003246	PRPF4	85	98.837	ENSPVAG00000004708	PRPF4	82	98.837	Pteropus_vampyrus
ENSTTRG00000003246	PRPF4	85	78.859	ENSPNYG00000008013	prpf4	89	78.859	Pundamilia_nyererei
ENSTTRG00000003246	PRPF4	85	81.544	ENSPNAG00000000697	prpf4	89	81.544	Pygocentrus_nattereri
ENSTTRG00000003246	PRPF4	85	98.993	ENSRNOG00000014777	Prpf4	82	98.993	Rattus_norvegicus
ENSTTRG00000003246	PRPF4	85	99.329	ENSRBIG00000040221	PRPF4	82	99.329	Rhinopithecus_bieti
ENSTTRG00000003246	PRPF4	85	99.329	ENSRROG00000040240	PRPF4	82	99.329	Rhinopithecus_roxellana
ENSTTRG00000003246	PRPF4	85	98.837	ENSSHAG00000017658	PRPF4	81	98.837	Sarcophilus_harrisii
ENSTTRG00000003246	PRPF4	85	82.550	ENSSFOG00015008963	prpf4	89	82.550	Scleropages_formosus
ENSTTRG00000003246	PRPF4	85	76.846	ENSSMAG00000008889	prpf4	89	76.846	Scophthalmus_maximus
ENSTTRG00000003246	PRPF4	79	78.188	ENSSDUG00000022083	prpf4	83	78.188	Seriola_dumerili
ENSTTRG00000003246	PRPF4	79	78.188	ENSSLDG00000008115	prpf4	83	78.188	Seriola_lalandi_dorsalis
ENSTTRG00000003246	PRPF4	85	93.023	ENSSPUG00000015582	PRPF4	82	93.023	Sphenodon_punctatus
ENSTTRG00000003246	PRPF4	85	73.256	ENSSPAG00000011286	prpf4	80	73.256	Stegastes_partitus
ENSTTRG00000003246	PRPF4	85	99.329	ENSSSCG00000024648	PRPF4	82	99.329	Sus_scrofa
ENSTTRG00000003246	PRPF4	85	91.860	ENSTGUG00000002623	PRPF4	87	91.860	Taeniopygia_guttata
ENSTTRG00000003246	PRPF4	85	77.517	ENSTRUG00000008853	prpf4	89	77.517	Takifugu_rubripes
ENSTTRG00000003246	PRPF4	85	77.517	ENSTNIG00000013250	prpf4	89	77.517	Tetraodon_nigroviridis
ENSTTRG00000003246	PRPF4	85	97.674	ENSTBEG00000000821	PRPF4	82	97.674	Tupaia_belangeri
ENSTTRG00000003246	PRPF4	60	95.185	ENSUAMG00000018288	PRPF4	77	95.185	Ursus_americanus
ENSTTRG00000003246	PRPF4	85	98.837	ENSUMAG00000019375	PRPF4	82	98.837	Ursus_maritimus
ENSTTRG00000003246	PRPF4	85	98.993	ENSVPAG00000005281	PRPF4	82	98.993	Vicugna_pacos
ENSTTRG00000003246	PRPF4	85	98.837	ENSVVUG00000002476	PRPF4	85	98.837	Vulpes_vulpes
ENSTTRG00000003246	PRPF4	69	83.607	ENSXCOG00000006101	prpf4	81	83.607	Xiphophorus_couchianus
ENSTTRG00000003246	PRPF4	79	83.607	ENSXMAG00000002750	prpf4	78	83.607	Xiphophorus_maculatus