EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000003414 (Gene tree)
Gene ID: -
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 36909 bases
Position: chrGeneScaffold_1726:777710-814618
Accession: 10768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000003203	SF3b1	PF08920.10	5.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000003415	SF3B1-201	3915	-	ENSTTRP00000003203	1304 (aa)	-	UPI00018B8C76

Gene Model

Click here to download ENSTTRG00000003414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000003414's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000003414	SF3B1	92	94.185	ENSG00000115524	SF3B1	100	100.000	Homo_sapiens
ENSTTRG00000003414	SF3B1	92	93.655	ENSAPOG00000011894	sf3b1	92	93.426	Acanthochromis_polyacanthus
ENSTTRG00000003414	SF3B1	92	94.185	ENSAMEG00000013809	SF3B1	92	94.185	Ailuropoda_melanoleuca
ENSTTRG00000003414	SF3B1	92	93.300	ENSACIG00000020910	sf3b1	89	93.300	Amphilophus_citrinellus
ENSTTRG00000003414	SF3B1	92	93.426	ENSAOCG00000004478	sf3b1	92	93.426	Amphiprion_ocellaris
ENSTTRG00000003414	SF3B1	92	93.426	ENSAPEG00000012937	sf3b1	92	93.426	Amphiprion_percula
ENSTTRG00000003414	SF3B1	92	93.401	ENSATEG00000020435	sf3b1	92	93.401	Anabas_testudineus
ENSTTRG00000003414	SF3B1	92	94.058	ENSAPLG00000003993	SF3B1	92	94.058	Anas_platyrhynchos
ENSTTRG00000003414	SF3B1	92	93.932	ENSACAG00000009612	SF3B1	92	93.932	Anolis_carolinensis
ENSTTRG00000003414	SF3B1	92	94.185	ENSANAG00000021577	SF3B1	91	100.000	Aotus_nancymaae
ENSTTRG00000003414	SF3B1	92	93.300	ENSACLG00000023470	sf3b1	92	93.300	Astatotilapia_calliptera
ENSTTRG00000003414	SF3B1	92	93.173	ENSAMXG00000002219	sf3b1	92	93.173	Astyanax_mexicanus
ENSTTRG00000003414	SF3B1	92	94.185	ENSBTAG00000008915	SF3B1	92	94.185	Bos_taurus
ENSTTRG00000003414	SF3B1	85	78.003	WBGene00011605	sftb-1	84	78.003	Caenorhabditis_elegans
ENSTTRG00000003414	SF3B1	92	94.185	ENSCJAG00000003902	SF3B1	92	94.185	Callithrix_jacchus
ENSTTRG00000003414	SF3B1	92	94.185	ENSCAFG00000010826	SF3B1	92	94.185	Canis_familiaris
ENSTTRG00000003414	SF3B1	92	94.185	ENSCAFG00020004750	SF3B1	92	94.185	Canis_lupus_dingo
ENSTTRG00000003414	SF3B1	92	94.185	ENSCHIG00000015226	SF3B1	92	94.185	Capra_hircus
ENSTTRG00000003414	SF3B1	92	94.058	ENSTSYG00000009214	SF3B1	92	94.058	Carlito_syrichta
ENSTTRG00000003414	SF3B1	92	94.185	ENSCAPG00000006547	SF3B1	92	94.185	Cavia_aperea
ENSTTRG00000003414	SF3B1	92	94.185	ENSCPOG00000009353	SF3B1	92	94.185	Cavia_porcellus
ENSTTRG00000003414	SF3B1	92	94.185	ENSCCAG00000020506	SF3B1	92	94.185	Cebus_capucinus
ENSTTRG00000003414	SF3B1	92	94.185	ENSCATG00000035735	SF3B1	92	94.185	Cercocebus_atys
ENSTTRG00000003414	SF3B1	92	94.185	ENSCLAG00000014767	SF3B1	92	94.185	Chinchilla_lanigera
ENSTTRG00000003414	SF3B1	92	94.185	ENSCSAG00000011505	SF3B1	92	94.185	Chlorocebus_sabaeus
ENSTTRG00000003414	SF3B1	69	100.000	ENSCHOG00000009860	SF3B1	68	100.000	Choloepus_hoffmanni
ENSTTRG00000003414	SF3B1	92	94.058	ENSCPBG00000021902	SF3B1	91	97.917	Chrysemys_picta_bellii
ENSTTRG00000003414	SF3B1	58	83.484	ENSCING00000002558	-	85	83.484	Ciona_intestinalis
ENSTTRG00000003414	SF3B1	92	85.714	ENSCSAVG00000002559	-	92	85.714	Ciona_savignyi
ENSTTRG00000003414	SF3B1	92	94.185	ENSCANG00000029415	SF3B1	92	94.185	Colobus_angolensis_palliatus
ENSTTRG00000003414	SF3B1	92	94.185	ENSCGRG00001016990	Sf3b1	92	94.185	Cricetulus_griseus_chok1gshd
ENSTTRG00000003414	SF3B1	92	94.185	ENSCGRG00000005301	Sf3b1	92	94.185	Cricetulus_griseus_crigri
ENSTTRG00000003414	SF3B1	92	87.737	ENSCSEG00000003860	sf3b1	92	87.737	Cynoglossus_semilaevis
ENSTTRG00000003414	SF3B1	88	93.640	ENSCVAG00000003680	sf3b1	92	93.640	Cyprinodon_variegatus
ENSTTRG00000003414	SF3B1	92	93.173	ENSDARG00000056138	sf3b1	92	93.173	Danio_rerio
ENSTTRG00000003414	SF3B1	92	94.185	ENSDNOG00000011754	SF3B1	92	94.185	Dasypus_novemcinctus
ENSTTRG00000003414	SF3B1	92	94.185	ENSDORG00000002399	Sf3b1	92	94.185	Dipodomys_ordii
ENSTTRG00000003414	SF3B1	92	86.726	FBgn0031266	Sf3b1	92	86.726	Drosophila_melanogaster
ENSTTRG00000003414	SF3B1	75	91.434	ENSETEG00000009188	SF3B1	90	91.434	Echinops_telfairi
ENSTTRG00000003414	SF3B1	92	90.518	ENSEBUG00000004325	sf3b1	91	90.518	Eptatretus_burgeri
ENSTTRG00000003414	SF3B1	92	94.185	ENSEASG00005020159	SF3B1	90	94.185	Equus_asinus_asinus
ENSTTRG00000003414	SF3B1	92	94.185	ENSECAG00000021657	SF3B1	90	94.185	Equus_caballus
ENSTTRG00000003414	SF3B1	79	100.000	ENSEEUG00000000836	SF3B1	74	100.000	Erinaceus_europaeus
ENSTTRG00000003414	SF3B1	92	93.300	ENSELUG00000005977	sf3b1	91	93.300	Esox_lucius
ENSTTRG00000003414	SF3B1	92	94.185	ENSFCAG00000005038	SF3B1	92	94.185	Felis_catus
ENSTTRG00000003414	SF3B1	92	94.185	ENSFALG00000004281	SF3B1	91	94.185	Ficedula_albicollis
ENSTTRG00000003414	SF3B1	92	94.185	ENSFDAG00000017510	SF3B1	92	94.185	Fukomys_damarensis
ENSTTRG00000003414	SF3B1	92	93.300	ENSFHEG00000014333	sf3b1	92	93.300	Fundulus_heteroclitus
ENSTTRG00000003414	SF3B1	92	93.047	ENSGMOG00000006773	sf3b1	92	93.047	Gadus_morhua
ENSTTRG00000003414	SF3B1	92	94.058	ENSGALG00000008038	SF3B1	92	94.058	Gallus_gallus
ENSTTRG00000003414	SF3B1	91	93.173	ENSGAFG00000000704	sf3b1	92	93.173	Gambusia_affinis
ENSTTRG00000003414	SF3B1	92	93.426	ENSGACG00000008839	sf3b1	92	93.426	Gasterosteus_aculeatus
ENSTTRG00000003414	SF3B1	92	94.058	ENSGAGG00000017478	SF3B1	92	94.058	Gopherus_agassizii
ENSTTRG00000003414	SF3B1	92	94.185	ENSGGOG00000009264	SF3B1	92	94.185	Gorilla_gorilla
ENSTTRG00000003414	SF3B1	92	93.409	ENSHBUG00000007705	sf3b1	92	93.409	Haplochromis_burtoni
ENSTTRG00000003414	SF3B1	92	94.185	ENSHGLG00000008285	-	92	94.185	Heterocephalus_glaber_female
ENSTTRG00000003414	SF3B1	92	91.337	ENSHGLG00100005535	-	91	91.337	Heterocephalus_glaber_male
ENSTTRG00000003414	SF3B1	92	93.552	ENSHCOG00000016775	sf3b1	92	93.552	Hippocampus_comes
ENSTTRG00000003414	SF3B1	92	93.300	ENSIPUG00000013171	sf3b1	92	93.300	Ictalurus_punctatus
ENSTTRG00000003414	SF3B1	92	94.185	ENSSTOG00000011034	SF3B1	92	94.185	Ictidomys_tridecemlineatus
ENSTTRG00000003414	SF3B1	91	94.058	ENSJJAG00000010903	Sf3b1	92	94.058	Jaculus_jaculus
ENSTTRG00000003414	SF3B1	92	93.300	ENSKMAG00000004009	sf3b1	92	93.300	Kryptolebias_marmoratus
ENSTTRG00000003414	SF3B1	92	93.173	ENSLBEG00000022208	sf3b1	92	93.173	Labrus_bergylta
ENSTTRG00000003414	SF3B1	92	88.763	ENSLACG00000014832	SF3B1	92	88.763	Latimeria_chalumnae
ENSTTRG00000003414	SF3B1	92	93.679	ENSLOCG00000003899	sf3b1	92	93.679	Lepisosteus_oculatus
ENSTTRG00000003414	SF3B1	92	94.185	ENSLAFG00000001956	SF3B1	92	94.185	Loxodonta_africana
ENSTTRG00000003414	SF3B1	92	94.185	ENSMMUG00000022430	SF3B1	91	94.185	Macaca_mulatta
ENSTTRG00000003414	SF3B1	92	94.185	ENSMNEG00000042333	SF3B1	91	100.000	Macaca_nemestrina
ENSTTRG00000003414	SF3B1	85	94.185	ENSMLEG00000026141	SF3B1	88	94.185	Mandrillus_leucophaeus
ENSTTRG00000003414	SF3B1	92	93.173	ENSMAMG00000010241	sf3b1	92	93.173	Mastacembelus_armatus
ENSTTRG00000003414	SF3B1	92	93.300	ENSMZEG00005021254	sf3b1	92	93.300	Maylandia_zebra
ENSTTRG00000003414	SF3B1	92	94.058	ENSMGAG00000007017	SF3B1	92	94.058	Meleagris_gallopavo
ENSTTRG00000003414	SF3B1	88	100.000	ENSMAUG00000009071	Sf3b1	92	100.000	Mesocricetus_auratus
ENSTTRG00000003414	SF3B1	92	94.185	ENSMICG00000013879	SF3B1	92	94.185	Microcebus_murinus
ENSTTRG00000003414	SF3B1	88	93.207	ENSMOCG00000000455	Sf3b1	90	93.207	Microtus_ochrogaster
ENSTTRG00000003414	SF3B1	76	92.014	ENSMMOG00000000475	sf3b1	91	92.014	Mola_mola
ENSTTRG00000003414	SF3B1	92	94.058	ENSMODG00000012275	SF3B1	92	94.058	Monodelphis_domestica
ENSTTRG00000003414	SF3B1	92	93.173	ENSMALG00000017211	sf3b1	92	93.173	Monopterus_albus
ENSTTRG00000003414	SF3B1	92	94.185	MGP_CAROLIEiJ_G0014141	Sf3b1	92	94.185	Mus_caroli
ENSTTRG00000003414	SF3B1	92	94.185	ENSMUSG00000025982	Sf3b1	92	94.185	Mus_musculus
ENSTTRG00000003414	SF3B1	92	94.185	MGP_SPRETEiJ_G0014947	Sf3b1	92	94.185	Mus_spretus
ENSTTRG00000003414	SF3B1	92	94.185	ENSMPUG00000007799	SF3B1	92	94.185	Mustela_putorius_furo
ENSTTRG00000003414	SF3B1	92	92.288	ENSMLUG00000000840	SF3B1	92	92.288	Myotis_lucifugus
ENSTTRG00000003414	SF3B1	92	94.185	ENSNGAG00000021884	-	92	94.185	Nannospalax_galili
ENSTTRG00000003414	SF3B1	92	93.300	ENSNBRG00000015816	sf3b1	92	93.300	Neolamprologus_brichardi
ENSTTRG00000003414	SF3B1	92	94.185	ENSNLEG00000006861	SF3B1	92	94.185	Nomascus_leucogenys
ENSTTRG00000003414	SF3B1	64	100.000	ENSMEUG00000015848	-	61	100.000	Notamacropus_eugenii
ENSTTRG00000003414	SF3B1	92	87.167	ENSOPRG00000008596	SF3B1	92	87.167	Ochotona_princeps
ENSTTRG00000003414	SF3B1	92	94.185	ENSODEG00000011153	-	92	94.185	Octodon_degus
ENSTTRG00000003414	SF3B1	92	93.300	ENSONIG00000013758	sf3b1	92	93.300	Oreochromis_niloticus
ENSTTRG00000003414	SF3B1	78	98.964	ENSOCUG00000012722	-	87	98.964	Oryctolagus_cuniculus
ENSTTRG00000003414	SF3B1	92	93.173	ENSORLG00000020219	sf3b1	92	93.173	Oryzias_latipes
ENSTTRG00000003414	SF3B1	92	93.173	ENSORLG00020001746	sf3b1	92	93.173	Oryzias_latipes_hni
ENSTTRG00000003414	SF3B1	56	99.688	ENSORLG00015001759	sf3b1	86	99.688	Oryzias_latipes_hsok
ENSTTRG00000003414	SF3B1	92	93.173	ENSOMEG00000019231	sf3b1	92	93.173	Oryzias_melastigma
ENSTTRG00000003414	SF3B1	92	94.185	ENSOARG00000015374	SF3B1	92	94.185	Ovis_aries
ENSTTRG00000003414	SF3B1	92	94.185	ENSPPAG00000035007	SF3B1	92	94.185	Pan_paniscus
ENSTTRG00000003414	SF3B1	92	94.185	ENSPPRG00000009090	SF3B1	92	94.185	Panthera_pardus
ENSTTRG00000003414	SF3B1	92	94.185	ENSPTIG00000021557	SF3B1	92	94.185	Panthera_tigris_altaica
ENSTTRG00000003414	SF3B1	90	94.185	ENSPTRG00000012771	SF3B1	90	94.185	Pan_troglodytes
ENSTTRG00000003414	SF3B1	92	94.185	ENSPANG00000013417	SF3B1	92	94.185	Papio_anubis
ENSTTRG00000003414	SF3B1	92	93.173	ENSPKIG00000000784	sf3b1	92	93.173	Paramormyrops_kingsleyae
ENSTTRG00000003414	SF3B1	92	94.058	ENSPSIG00000017222	SF3B1	91	94.058	Pelodiscus_sinensis
ENSTTRG00000003414	SF3B1	83	93.103	ENSPMGG00000004330	sf3b1	91	93.103	Periophthalmus_magnuspinnatus
ENSTTRG00000003414	SF3B1	92	94.185	ENSPEMG00000010699	Sf3b1	92	94.185	Peromyscus_maniculatus_bairdii
ENSTTRG00000003414	SF3B1	92	90.898	ENSPMAG00000001311	sf3b1	92	90.898	Petromyzon_marinus
ENSTTRG00000003414	SF3B1	92	94.058	ENSPCIG00000010642	SF3B1	92	94.058	Phascolarctos_cinereus
ENSTTRG00000003414	SF3B1	92	93.047	ENSPFOG00000000073	sf3b1	92	93.047	Poecilia_formosa
ENSTTRG00000003414	SF3B1	92	93.047	ENSPLAG00000002293	sf3b1	92	93.047	Poecilia_latipinna
ENSTTRG00000003414	SF3B1	92	93.047	ENSPMEG00000000446	sf3b1	90	93.047	Poecilia_mexicana
ENSTTRG00000003414	SF3B1	92	93.173	ENSPREG00000019652	sf3b1	92	93.173	Poecilia_reticulata
ENSTTRG00000003414	SF3B1	83	100.000	ENSPPYG00000013044	SF3B1	91	100.000	Pongo_abelii
ENSTTRG00000003414	SF3B1	92	93.932	ENSPCAG00000009292	SF3B1	92	93.932	Procavia_capensis
ENSTTRG00000003414	SF3B1	92	94.185	ENSPCOG00000024074	SF3B1	92	94.185	Propithecus_coquereli
ENSTTRG00000003414	SF3B1	92	94.185	ENSPVAG00000008302	SF3B1	92	94.185	Pteropus_vampyrus
ENSTTRG00000003414	SF3B1	92	93.300	ENSPNYG00000014939	sf3b1	92	93.300	Pundamilia_nyererei
ENSTTRG00000003414	SF3B1	92	93.300	ENSPNAG00000008288	sf3b1	92	93.300	Pygocentrus_nattereri
ENSTTRG00000003414	SF3B1	92	94.185	ENSRNOG00000013516	Sf3b1	92	94.185	Rattus_norvegicus
ENSTTRG00000003414	SF3B1	92	90.754	ENSRBIG00000026096	SF3B1	92	90.754	Rhinopithecus_bieti
ENSTTRG00000003414	SF3B1	92	94.185	ENSRROG00000031308	SF3B1	92	94.185	Rhinopithecus_roxellana
ENSTTRG00000003414	SF3B1	92	94.185	ENSSBOG00000020080	SF3B1	92	94.185	Saimiri_boliviensis_boliviensis
ENSTTRG00000003414	SF3B1	92	94.058	ENSSHAG00000017564	SF3B1	92	94.058	Sarcophilus_harrisii
ENSTTRG00000003414	SF3B1	92	93.300	ENSSFOG00015021535	sf3b1	92	93.300	Scleropages_formosus
ENSTTRG00000003414	SF3B1	92	93.274	ENSSMAG00000013977	sf3b1	91	93.274	Scophthalmus_maximus
ENSTTRG00000003414	SF3B1	92	93.173	ENSSDUG00000017422	sf3b1	92	93.173	Seriola_dumerili
ENSTTRG00000003414	SF3B1	92	93.173	ENSSLDG00000019495	sf3b1	92	93.173	Seriola_lalandi_dorsalis
ENSTTRG00000003414	SF3B1	63	100.000	ENSSARG00000007016	SF3B1	63	100.000	Sorex_araneus
ENSTTRG00000003414	SF3B1	92	93.805	ENSSPUG00000000410	SF3B1	92	93.805	Sphenodon_punctatus
ENSTTRG00000003414	SF3B1	92	93.426	ENSSPAG00000010451	sf3b1	91	93.426	Stegastes_partitus
ENSTTRG00000003414	SF3B1	81	100.000	ENSSSCG00000016075	SF3B1	91	100.000	Sus_scrofa
ENSTTRG00000003414	SF3B1	92	94.058	ENSTGUG00000010553	SF3B1	92	94.058	Taeniopygia_guttata
ENSTTRG00000003414	SF3B1	92	93.300	ENSTRUG00000015534	sf3b1	92	93.300	Takifugu_rubripes
ENSTTRG00000003414	SF3B1	80	100.000	ENSTBEG00000008714	SF3B1	84	100.000	Tupaia_belangeri
ENSTTRG00000003414	SF3B1	86	94.949	ENSUAMG00000018506	SF3B1	94	94.949	Ursus_americanus
ENSTTRG00000003414	SF3B1	92	94.185	ENSUMAG00000020945	SF3B1	92	94.185	Ursus_maritimus
ENSTTRG00000003414	SF3B1	92	94.185	ENSVPAG00000005798	SF3B1	92	94.185	Vicugna_pacos
ENSTTRG00000003414	SF3B1	92	94.185	ENSVVUG00000025948	SF3B1	87	94.185	Vulpes_vulpes
ENSTTRG00000003414	SF3B1	92	93.047	ENSXETG00000013339	sf3b1	92	93.047	Xenopus_tropicalis
ENSTTRG00000003414	SF3B1	92	90.392	ENSXCOG00000018086	sf3b1	92	90.392	Xiphophorus_couchianus
ENSTTRG00000003414	SF3B1	92	93.173	ENSXMAG00000007369	sf3b1	92	93.669	Xiphophorus_maculatus