EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000003676 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX3
Alias: FOX-3|HRNBP3|NeuN
Full Name: RNA binding fox-1 homolog 3
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 23747 bases
Position: chrGeneScaffold_103:179633-203379
Accession: 27097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000003448	Fox-1_C	PF12414.8	1.2e-40	1	1
ENSTTRP00000003448	RRM_1	PF00076.22	4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000003675	RBFOX3-201	1077	-	ENSTTRP00000003448	358 (aa)	-	UPI00018B7E33

Gene Model

Click here to download ENSTTRG00000003676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000003676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000003676	RBFOX3	100	55.527	ENSTTRG00000005700	RBFOX1	78	53.209
ENSTTRG00000003676	RBFOX3	100	48.276	ENSTTRG00000006922	RBFOX2	89	46.292

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000003676	RBFOX3	96	92.128	ENSG00000167281	RBFOX3	100	91.720	Homo_sapiens
ENSTTRG00000003676	RBFOX3	80	89.583	ENSAPOG00000015658	-	63	93.103	Acanthochromis_polyacanthus
ENSTTRG00000003676	RBFOX3	100	66.759	ENSAPOG00000021630	rbfox3b	81	62.717	Acanthochromis_polyacanthus
ENSTTRG00000003676	RBFOX3	97	75.000	ENSAMEG00000014170	RBFOX3	82	74.185	Ailuropoda_melanoleuca
ENSTTRG00000003676	RBFOX3	83	85.106	ENSACIG00000010817	rbfox3b	94	56.647	Amphilophus_citrinellus
ENSTTRG00000003676	RBFOX3	72	66.182	ENSACIG00000003768	-	72	65.769	Amphilophus_citrinellus
ENSTTRG00000003676	RBFOX3	79	89.583	ENSAOCG00000010786	-	77	59.710	Amphiprion_ocellaris
ENSTTRG00000003676	RBFOX3	100	66.759	ENSAOCG00000012358	rbfox3b	81	62.717	Amphiprion_ocellaris
ENSTTRG00000003676	RBFOX3	79	89.583	ENSAPEG00000015891	-	71	93.103	Amphiprion_percula
ENSTTRG00000003676	RBFOX3	80	80.488	ENSAPEG00000019081	rbfox3b	73	93.103	Amphiprion_percula
ENSTTRG00000003676	RBFOX3	100	67.956	ENSATEG00000019945	rbfox3b	95	64.553	Anabas_testudineus
ENSTTRG00000003676	RBFOX3	96	62.356	ENSATEG00000023101	-	92	61.207	Anabas_testudineus
ENSTTRG00000003676	RBFOX3	100	72.299	ENSACAG00000016093	RBFOX3	83	71.387	Anolis_carolinensis
ENSTTRG00000003676	RBFOX3	97	84.000	ENSANAG00000023457	RBFOX3	89	84.000	Aotus_nancymaae
ENSTTRG00000003676	RBFOX3	100	64.641	ENSACLG00000025552	-	81	63.689	Astatotilapia_calliptera
ENSTTRG00000003676	RBFOX3	100	65.922	ENSACLG00000020011	rbfox3b	95	64.740	Astatotilapia_calliptera
ENSTTRG00000003676	RBFOX3	96	63.714	ENSAMXG00000037246	rbfox3a	90	64.571	Astyanax_mexicanus
ENSTTRG00000003676	RBFOX3	100	63.085	ENSAMXG00000042841	rbfox3b	85	59.483	Astyanax_mexicanus
ENSTTRG00000003676	RBFOX3	97	85.143	ENSBTAG00000006280	RBFOX3	97	85.143	Bos_taurus
ENSTTRG00000003676	RBFOX3	96	91.545	ENSCJAG00000009563	RBFOX3	96	91.545	Callithrix_jacchus
ENSTTRG00000003676	RBFOX3	79	76.056	ENSCAFG00000005547	RBFOX3	85	76.056	Canis_familiaris
ENSTTRG00000003676	RBFOX3	96	92.711	ENSCAFG00020008126	RBFOX3	92	92.442	Canis_lupus_dingo
ENSTTRG00000003676	RBFOX3	96	92.151	ENSCHIG00000009124	RBFOX3	92	92.151	Capra_hircus
ENSTTRG00000003676	RBFOX3	96	89.826	ENSTSYG00000029617	RBFOX3	96	89.826	Carlito_syrichta
ENSTTRG00000003676	RBFOX3	96	89.914	ENSCPOG00000021703	RBFOX3	96	88.761	Cavia_porcellus
ENSTTRG00000003676	RBFOX3	100	83.008	ENSCCAG00000028450	RBFOX3	97	84.000	Cebus_capucinus
ENSTTRG00000003676	RBFOX3	96	86.589	ENSCATG00000018349	RBFOX3	81	100.000	Cercocebus_atys
ENSTTRG00000003676	RBFOX3	96	91.014	ENSCLAG00000006449	RBFOX3	96	88.986	Chinchilla_lanigera
ENSTTRG00000003676	RBFOX3	96	78.488	ENSCSAG00000002355	RBFOX3	95	78.488	Chlorocebus_sabaeus
ENSTTRG00000003676	RBFOX3	96	69.767	ENSCPBG00000010904	RBFOX3	95	69.767	Chrysemys_picta_bellii
ENSTTRG00000003676	RBFOX3	96	92.151	ENSCANG00000043120	RBFOX3	92	92.151	Colobus_angolensis_palliatus
ENSTTRG00000003676	RBFOX3	96	86.705	ENSCGRG00001019476	Rbfox3	96	87.572	Cricetulus_griseus_chok1gshd
ENSTTRG00000003676	RBFOX3	96	86.705	ENSCGRG00000003268	Rbfox3	96	87.572	Cricetulus_griseus_crigri
ENSTTRG00000003676	RBFOX3	84	89.583	ENSCSEG00000015567	RBFOX3	64	72.368	Cynoglossus_semilaevis
ENSTTRG00000003676	RBFOX3	100	53.297	ENSCSEG00000020606	RBFOX3	87	51.297	Cynoglossus_semilaevis
ENSTTRG00000003676	RBFOX3	100	66.759	ENSCVAG00000006882	rbfox3b	81	62.717	Cyprinodon_variegatus
ENSTTRG00000003676	RBFOX3	83	80.851	ENSDARG00000074310	rbfox3b	96	54.074	Danio_rerio
ENSTTRG00000003676	RBFOX3	96	63.429	ENSDARG00000010083	rbfox3a	91	64.286	Danio_rerio
ENSTTRG00000003676	RBFOX3	85	80.392	ENSDNOG00000039391	RBFOX3	81	80.392	Dasypus_novemcinctus
ENSTTRG00000003676	RBFOX3	96	78.717	ENSDORG00000005352	Rbfox3	93	88.384	Dipodomys_ordii
ENSTTRG00000003676	RBFOX3	87	52.025	ENSEBUG00000013559	RBFOX3	62	53.875	Eptatretus_burgeri
ENSTTRG00000003676	RBFOX3	100	56.150	ENSEBUG00000002129	RBFOX3	88	54.875	Eptatretus_burgeri
ENSTTRG00000003676	RBFOX3	96	76.301	ENSEASG00005005059	RBFOX3	95	77.168	Equus_asinus_asinus
ENSTTRG00000003676	RBFOX3	96	76.012	ENSECAG00000023811	RBFOX3	95	76.879	Equus_caballus
ENSTTRG00000003676	RBFOX3	97	75.214	ENSEEUG00000013974	RBFOX3	94	73.789	Erinaceus_europaeus
ENSTTRG00000003676	RBFOX3	100	66.205	ENSELUG00000017963	rbfox3b	96	55.301	Esox_lucius
ENSTTRG00000003676	RBFOX3	97	82.000	ENSFCAG00000002555	RBFOX3	97	82.000	Felis_catus
ENSTTRG00000003676	RBFOX3	96	64.789	ENSFALG00000012288	RBFOX3	81	60.904	Ficedula_albicollis
ENSTTRG00000003676	RBFOX3	96	85.303	ENSFDAG00000007489	RBFOX3	96	84.150	Fukomys_damarensis
ENSTTRG00000003676	RBFOX3	100	59.834	ENSFHEG00000008550	rbfox3b	96	55.874	Fundulus_heteroclitus
ENSTTRG00000003676	RBFOX3	100	61.050	ENSGMOG00000019304	-	95	62.857	Gadus_morhua
ENSTTRG00000003676	RBFOX3	96	74.419	ENSGALG00000032889	RBFOX3	83	74.419	Gallus_gallus
ENSTTRG00000003676	RBFOX3	83	85.106	ENSGAFG00000005025	rbfox3b	79	71.491	Gambusia_affinis
ENSTTRG00000003676	RBFOX3	96	65.714	ENSGACG00000002138	-	92	66.286	Gasterosteus_aculeatus
ENSTTRG00000003676	RBFOX3	96	70.058	ENSGAGG00000020025	RBFOX3	95	70.058	Gopherus_agassizii
ENSTTRG00000003676	RBFOX3	96	91.860	ENSGGOG00000012546	RBFOX3	85	100.000	Gorilla_gorilla
ENSTTRG00000003676	RBFOX3	100	64.365	ENSHBUG00000023098	-	86	63.401	Haplochromis_burtoni
ENSTTRG00000003676	RBFOX3	100	65.922	ENSHBUG00000018099	rbfox3b	81	62.717	Haplochromis_burtoni
ENSTTRG00000003676	RBFOX3	96	89.398	ENSHGLG00000008679	RBFOX3	96	88.252	Heterocephalus_glaber_female
ENSTTRG00000003676	RBFOX3	96	85.100	ENSHGLG00100014739	RBFOX3	92	83.381	Heterocephalus_glaber_male
ENSTTRG00000003676	RBFOX3	78	88.636	ENSHCOG00000001863	RBFOX3	80	89.655	Hippocampus_comes
ENSTTRG00000003676	RBFOX3	96	61.449	ENSHCOG00000007444	RBFOX3	76	60.641	Hippocampus_comes
ENSTTRG00000003676	RBFOX3	96	63.143	ENSIPUG00000012010	rbfox3a	70	88.462	Ictalurus_punctatus
ENSTTRG00000003676	RBFOX3	100	58.380	ENSIPUG00000021966	rbfox3b	84	67.111	Ictalurus_punctatus
ENSTTRG00000003676	RBFOX3	97	83.607	ENSSTOG00000026817	RBFOX3	97	83.607	Ictidomys_tridecemlineatus
ENSTTRG00000003676	RBFOX3	96	90.988	ENSJJAG00000014167	Rbfox3	96	90.988	Jaculus_jaculus
ENSTTRG00000003676	RBFOX3	83	85.106	ENSKMAG00000006726	rbfox3b	81	62.717	Kryptolebias_marmoratus
ENSTTRG00000003676	RBFOX3	83	85.106	ENSLBEG00000004030	rbfox3b	94	56.358	Labrus_bergylta
ENSTTRG00000003676	RBFOX3	96	65.418	ENSLBEG00000022508	-	81	63.977	Labrus_bergylta
ENSTTRG00000003676	RBFOX3	96	60.108	ENSLACG00000018409	-	83	60.108	Latimeria_chalumnae
ENSTTRG00000003676	RBFOX3	96	66.954	ENSLOCG00000012267	rbfox3a	90	68.103	Lepisosteus_oculatus
ENSTTRG00000003676	RBFOX3	96	87.536	ENSLAFG00000016623	RBFOX3	92	89.275	Loxodonta_africana
ENSTTRG00000003676	RBFOX3	96	92.128	ENSMFAG00000002247	RBFOX3	96	92.128	Macaca_fascicularis
ENSTTRG00000003676	RBFOX3	97	84.571	ENSMMUG00000023028	RBFOX3	86	100.000	Macaca_mulatta
ENSTTRG00000003676	RBFOX3	96	86.297	ENSMNEG00000041147	RBFOX3	92	85.465	Macaca_nemestrina
ENSTTRG00000003676	RBFOX3	96	86.589	ENSMLEG00000025686	RBFOX3	95	78.198	Mandrillus_leucophaeus
ENSTTRG00000003676	RBFOX3	96	61.383	ENSMAMG00000020600	-	85	59.249	Mastacembelus_armatus
ENSTTRG00000003676	RBFOX3	83	85.106	ENSMAMG00000019810	rbfox3b	94	56.268	Mastacembelus_armatus
ENSTTRG00000003676	RBFOX3	66	58.955	ENSMZEG00005003055	-	66	57.708	Maylandia_zebra
ENSTTRG00000003676	RBFOX3	100	65.922	ENSMZEG00005000781	rbfox3b	81	62.717	Maylandia_zebra
ENSTTRG00000003676	RBFOX3	53	79.688	ENSMGAG00000005600	RBFOX3	73	79.688	Meleagris_gallopavo
ENSTTRG00000003676	RBFOX3	96	88.150	ENSMAUG00000013543	Rbfox3	96	85.838	Mesocricetus_auratus
ENSTTRG00000003676	RBFOX3	100	88.301	ENSMICG00000014898	RBFOX3	93	88.953	Microcebus_murinus
ENSTTRG00000003676	RBFOX3	96	86.667	ENSMOCG00000015373	Rbfox3	96	86.667	Microtus_ochrogaster
ENSTTRG00000003676	RBFOX3	100	65.565	ENSMMOG00000020193	rbfox3b	81	62.931	Mola_mola
ENSTTRG00000003676	RBFOX3	96	73.837	ENSMODG00000002089	RBFOX3	83	73.837	Monodelphis_domestica
ENSTTRG00000003676	RBFOX3	84	87.500	ENSMALG00000018270	-	85	89.655	Monopterus_albus
ENSTTRG00000003676	RBFOX3	100	65.928	ENSMALG00000020407	rbfox3b	81	61.850	Monopterus_albus
ENSTTRG00000003676	RBFOX3	96	87.246	MGP_CAROLIEiJ_G0017487	Rbfox3	100	84.138	Mus_caroli
ENSTTRG00000003676	RBFOX3	96	88.406	ENSMUSG00000025576	Rbfox3	100	84.138	Mus_musculus
ENSTTRG00000003676	RBFOX3	96	87.572	MGP_PahariEiJ_G0018614	Rbfox3	100	84.828	Mus_pahari
ENSTTRG00000003676	RBFOX3	96	87.536	MGP_SPRETEiJ_G0018331	Rbfox3	100	84.138	Mus_spretus
ENSTTRG00000003676	RBFOX3	97	71.576	ENSMPUG00000012319	RBFOX3	89	71.576	Mustela_putorius_furo
ENSTTRG00000003676	RBFOX3	96	87.536	ENSNGAG00000018006	Rbfox3	96	87.536	Nannospalax_galili
ENSTTRG00000003676	RBFOX3	78	93.333	ENSNBRG00000022885	-	77	93.103	Neolamprologus_brichardi
ENSTTRG00000003676	RBFOX3	74	92.593	ENSNBRG00000010102	rbfox3b	74	92.593	Neolamprologus_brichardi
ENSTTRG00000003676	RBFOX3	61	100.000	ENSNLEG00000000153	-	79	100.000	Nomascus_leucogenys
ENSTTRG00000003676	RBFOX3	96	60.641	ENSMEUG00000004218	-	80	78.462	Notamacropus_eugenii
ENSTTRG00000003676	RBFOX3	64	91.667	ENSOPRG00000016279	-	65	91.667	Ochotona_princeps
ENSTTRG00000003676	RBFOX3	96	91.014	ENSODEG00000009433	RBFOX3	92	90.725	Octodon_degus
ENSTTRG00000003676	RBFOX3	100	71.154	ENSONIG00000009549	rbfox3b	92	68.481	Oreochromis_niloticus
ENSTTRG00000003676	RBFOX3	100	65.193	ENSONIG00000007282	-	87	64.265	Oreochromis_niloticus
ENSTTRG00000003676	RBFOX3	79	74.558	ENSOCUG00000014217	RBFOX3	77	73.498	Oryctolagus_cuniculus
ENSTTRG00000003676	RBFOX3	100	66.759	ENSORLG00000000905	rbfox3b	64	62.717	Oryzias_latipes
ENSTTRG00000003676	RBFOX3	100	66.759	ENSORLG00020018030	rbfox3b	90	55.874	Oryzias_latipes_hni
ENSTTRG00000003676	RBFOX3	100	66.482	ENSORLG00015009200	rbfox3b	86	93.103	Oryzias_latipes_hsok
ENSTTRG00000003676	RBFOX3	66	68.217	ENSOMEG00000014677	rbfox3b	77	62.602	Oryzias_melastigma
ENSTTRG00000003676	RBFOX3	96	76.744	ENSOGAG00000029595	RBFOX3	80	76.744	Otolemur_garnettii
ENSTTRG00000003676	RBFOX3	69	98.214	ENSOARG00000002908	RBFOX3	78	55.848	Ovis_aries
ENSTTRG00000003676	RBFOX3	89	91.483	ENSPPAG00000025383	RBFOX3	85	90.940	Pan_paniscus
ENSTTRG00000003676	RBFOX3	96	89.213	ENSPPRG00000007819	RBFOX3	96	89.213	Panthera_pardus
ENSTTRG00000003676	RBFOX3	96	91.860	ENSPTRG00000009727	RBFOX3	92	91.860	Pan_troglodytes
ENSTTRG00000003676	RBFOX3	96	86.589	ENSPANG00000019837	RBFOX3	95	78.198	Papio_anubis
ENSTTRG00000003676	RBFOX3	100	54.875	ENSPKIG00000022633	-	80	49.709	Paramormyrops_kingsleyae
ENSTTRG00000003676	RBFOX3	81	85.185	ENSPKIG00000010299	rbfox3a	77	61.850	Paramormyrops_kingsleyae
ENSTTRG00000003676	RBFOX3	87	64.331	ENSPMGG00000008000	rbfox3b	77	62.207	Periophthalmus_magnuspinnatus
ENSTTRG00000003676	RBFOX3	96	86.957	ENSPEMG00000010500	Rbfox3	96	86.957	Peromyscus_maniculatus_bairdii
ENSTTRG00000003676	RBFOX3	62	59.746	ENSPMAG00000008689	rbfox3b	92	59.746	Petromyzon_marinus
ENSTTRG00000003676	RBFOX3	96	87.209	ENSPCIG00000005766	RBFOX3	96	87.209	Phascolarctos_cinereus
ENSTTRG00000003676	RBFOX3	100	66.759	ENSPFOG00000018294	rbfox3b	92	58.640	Poecilia_formosa
ENSTTRG00000003676	RBFOX3	62	85.106	ENSPLAG00000000481	rbfox3b	65	93.103	Poecilia_latipinna
ENSTTRG00000003676	RBFOX3	100	59.834	ENSPMEG00000022997	rbfox3b	96	55.874	Poecilia_mexicana
ENSTTRG00000003676	RBFOX3	100	66.298	ENSPREG00000012886	rbfox3b	86	62.536	Poecilia_reticulata
ENSTTRG00000003676	RBFOX3	83	68.896	ENSPPYG00000008704	RBFOX3	74	68.896	Pongo_abelii
ENSTTRG00000003676	RBFOX3	96	84.593	ENSPCAG00000001401	RBFOX3	96	84.593	Procavia_capensis
ENSTTRG00000003676	RBFOX3	100	91.341	ENSPCOG00000012689	RBFOX3	97	92.128	Propithecus_coquereli
ENSTTRG00000003676	RBFOX3	96	80.580	ENSPVAG00000015243	RBFOX3	96	81.449	Pteropus_vampyrus
ENSTTRG00000003676	RBFOX3	74	92.593	ENSPNYG00000010414	rbfox3b	74	92.593	Pundamilia_nyererei
ENSTTRG00000003676	RBFOX3	78	93.333	ENSPNYG00000009079	-	73	93.103	Pundamilia_nyererei
ENSTTRG00000003676	RBFOX3	83	87.234	ENSPNAG00000018173	rbfox3b	82	70.833	Pygocentrus_nattereri
ENSTTRG00000003676	RBFOX3	96	63.429	ENSPNAG00000002889	rbfox3a	93	53.561	Pygocentrus_nattereri
ENSTTRG00000003676	RBFOX3	96	87.572	ENSRNOG00000003386	Rbfox3	92	88.439	Rattus_norvegicus
ENSTTRG00000003676	RBFOX3	96	86.880	ENSRBIG00000040449	RBFOX3	77	100.000	Rhinopithecus_bieti
ENSTTRG00000003676	RBFOX3	96	86.880	ENSRROG00000000766	RBFOX3	95	78.488	Rhinopithecus_roxellana
ENSTTRG00000003676	RBFOX3	96	91.545	ENSSBOG00000031591	RBFOX3	96	91.545	Saimiri_boliviensis_boliviensis
ENSTTRG00000003676	RBFOX3	96	67.287	ENSSHAG00000016076	RBFOX3	95	66.279	Sarcophilus_harrisii
ENSTTRG00000003676	RBFOX3	96	53.868	ENSSFOG00015004716	RBFOX3	84	52.874	Scleropages_formosus
ENSTTRG00000003676	RBFOX3	96	65.805	ENSSFOG00015023260	rbfox3a	91	60.452	Scleropages_formosus
ENSTTRG00000003676	RBFOX3	100	64.917	ENSSMAG00000019052	-	95	62.824	Scophthalmus_maximus
ENSTTRG00000003676	RBFOX3	100	63.228	ENSSMAG00000012618	rbfox3b	71	59.780	Scophthalmus_maximus
ENSTTRG00000003676	RBFOX3	77	81.481	ENSSDUG00000015801	-	73	93.103	Seriola_dumerili
ENSTTRG00000003676	RBFOX3	100	59.834	ENSSDUG00000023183	rbfox3b	96	55.874	Seriola_dumerili
ENSTTRG00000003676	RBFOX3	79	89.583	ENSSLDG00000016098	-	83	60.983	Seriola_lalandi_dorsalis
ENSTTRG00000003676	RBFOX3	100	66.759	ENSSLDG00000000149	rbfox3b	81	62.717	Seriola_lalandi_dorsalis
ENSTTRG00000003676	RBFOX3	96	70.520	ENSSPUG00000011733	RBFOX3	95	69.653	Sphenodon_punctatus
ENSTTRG00000003676	RBFOX3	88	57.994	ENSSPAG00000004898	-	75	55.333	Stegastes_partitus
ENSTTRG00000003676	RBFOX3	83	85.106	ENSSPAG00000017571	rbfox3b	79	52.023	Stegastes_partitus
ENSTTRG00000003676	RBFOX3	88	88.608	ENSSSCG00000039498	RBFOX3	96	90.823	Sus_scrofa
ENSTTRG00000003676	RBFOX3	100	62.431	ENSTRUG00000004894	rbfox3b	86	59.155	Takifugu_rubripes
ENSTTRG00000003676	RBFOX3	100	60.814	ENSTNIG00000011278	rbfox3b	82	56.878	Tetraodon_nigroviridis
ENSTTRG00000003676	RBFOX3	66	75.847	ENSTBEG00000004296	-	63	75.847	Tupaia_belangeri
ENSTTRG00000003676	RBFOX3	96	78.488	ENSUAMG00000004668	RBFOX3	95	77.616	Ursus_americanus
ENSTTRG00000003676	RBFOX3	96	92.442	ENSVVUG00000017864	RBFOX3	85	92.442	Vulpes_vulpes
ENSTTRG00000003676	RBFOX3	100	57.382	ENSXETG00000020236	rbfox3	81	56.484	Xenopus_tropicalis
ENSTTRG00000003676	RBFOX3	83	82.609	ENSXCOG00000018262	rbfox3b	77	71.491	Xiphophorus_couchianus
ENSTTRG00000003676	RBFOX3	100	66.759	ENSXMAG00000012939	rbfox3b	92	53.279	Xiphophorus_maculatus