EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000003935 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 102478 bases
Position: chrGeneScaffold_1083:358800-461277
Accession: 9757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000003705	R3H	PF01424.22	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000003935	R3HDM1-201	3291	-	ENSTTRP00000003705	1096 (aa)	-	UPI00018B8444

Gene Model

Click here to download ENSTTRG00000003935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000003935's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000003935	R3HDM1	86	54.444	ENSTTRG00000013082	R3HDM2	90	54.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000003935	R3HDM1	100	88.123	ENSG00000048991	R3HDM1	99	91.111	Homo_sapiens
ENSTTRG00000003935	R3HDM1	85	49.206	ENSAPOG00000020850	r3hdm1	85	55.556	Acanthochromis_polyacanthus
ENSTTRG00000003935	R3HDM1	100	89.211	ENSAMEG00000014886	R3HDM1	100	89.211	Ailuropoda_melanoleuca
ENSTTRG00000003935	R3HDM1	80	45.726	ENSAOCG00000005192	r3hdm1	82	55.172	Amphiprion_ocellaris
ENSTTRG00000003935	R3HDM1	80	47.583	ENSAPEG00000016108	r3hdm1	82	54.598	Amphiprion_percula
ENSTTRG00000003935	R3HDM1	79	46.245	ENSATEG00000000232	r3hdm1	89	46.667	Anabas_testudineus
ENSTTRG00000003935	R3HDM1	100	74.138	ENSAPLG00000015231	R3HDM1	100	74.319	Anas_platyrhynchos
ENSTTRG00000003935	R3HDM1	100	71.466	ENSACAG00000001676	R3HDM1	100	70.800	Anolis_carolinensis
ENSTTRG00000003935	R3HDM1	100	88.134	ENSANAG00000035334	R3HDM1	100	87.761	Aotus_nancymaae
ENSTTRG00000003935	R3HDM1	79	48.478	ENSACLG00000027282	r3hdm1	94	48.317	Astatotilapia_calliptera
ENSTTRG00000003935	R3HDM1	93	68.106	ENSAMXG00000012861	R3HDM1	100	68.029	Astyanax_mexicanus
ENSTTRG00000003935	R3HDM1	83	74.522	ENSAMXG00000003536	r3hdm1	89	74.441	Astyanax_mexicanus
ENSTTRG00000003935	R3HDM1	100	86.533	ENSBTAG00000013302	R3HDM1	100	86.533	Bos_taurus
ENSTTRG00000003935	R3HDM1	100	88.113	ENSCJAG00000011718	R3HDM1	100	87.738	Callithrix_jacchus
ENSTTRG00000003935	R3HDM1	100	89.483	ENSCAFG00000005075	R3HDM1	100	89.483	Canis_familiaris
ENSTTRG00000003935	R3HDM1	100	89.564	ENSCAFG00020016119	R3HDM1	100	89.564	Canis_lupus_dingo
ENSTTRG00000003935	R3HDM1	100	89.426	ENSCHIG00000020851	R3HDM1	100	89.426	Capra_hircus
ENSTTRG00000003935	R3HDM1	100	82.689	ENSCPOG00000012784	R3HDM1	100	82.601	Cavia_porcellus
ENSTTRG00000003935	R3HDM1	100	87.387	ENSCCAG00000027199	R3HDM1	100	87.114	Cebus_capucinus
ENSTTRG00000003935	R3HDM1	100	91.068	ENSCATG00000023642	R3HDM1	100	87.477	Cercocebus_atys
ENSTTRG00000003935	R3HDM1	100	83.377	ENSCLAG00000007962	R3HDM1	100	83.289	Chinchilla_lanigera
ENSTTRG00000003935	R3HDM1	100	84.400	ENSCSAG00000016356	R3HDM1	100	84.345	Chlorocebus_sabaeus
ENSTTRG00000003935	R3HDM1	87	77.304	ENSCHOG00000013638	R3HDM1	91	77.155	Choloepus_hoffmanni
ENSTTRG00000003935	R3HDM1	88	77.146	ENSCPBG00000009645	R3HDM1	100	90.775	Chrysemys_picta_bellii
ENSTTRG00000003935	R3HDM1	100	87.681	ENSCANG00000034748	R3HDM1	100	87.307	Colobus_angolensis_palliatus
ENSTTRG00000003935	R3HDM1	99	82.789	ENSCGRG00001012357	R3hdm1	97	82.701	Cricetulus_griseus_chok1gshd
ENSTTRG00000003935	R3HDM1	99	85.259	ENSCGRG00000012080	R3hdm1	91	93.424	Cricetulus_griseus_crigri
ENSTTRG00000003935	R3HDM1	66	44.832	ENSCSEG00000008944	r3hdm1	86	58.852	Cynoglossus_semilaevis
ENSTTRG00000003935	R3HDM1	89	44.908	ENSCVAG00000007582	r3hdm1	99	44.650	Cyprinodon_variegatus
ENSTTRG00000003935	R3HDM1	100	85.131	ENSDNOG00000000771	R3HDM1	100	85.131	Dasypus_novemcinctus
ENSTTRG00000003935	R3HDM1	100	77.070	ENSETEG00000013606	R3HDM1	100	77.525	Echinops_telfairi
ENSTTRG00000003935	R3HDM1	55	43.546	ENSEBUG00000014746	arpp21	97	42.813	Eptatretus_burgeri
ENSTTRG00000003935	R3HDM1	100	89.617	ENSEASG00005007392	R3HDM1	100	89.617	Equus_asinus_asinus
ENSTTRG00000003935	R3HDM1	100	89.545	ENSECAG00000019114	R3HDM1	100	89.545	Equus_caballus
ENSTTRG00000003935	R3HDM1	82	93.714	ENSEEUG00000012589	R3HDM1	79	93.714	Erinaceus_europaeus
ENSTTRG00000003935	R3HDM1	87	50.527	ENSELUG00000014413	r3hdm1	96	52.019	Esox_lucius
ENSTTRG00000003935	R3HDM1	84	61.776	ENSELUG00000004909	R3HDM1	95	53.523	Esox_lucius
ENSTTRG00000003935	R3HDM1	100	89.536	ENSFCAG00000027113	R3HDM1	100	89.536	Felis_catus
ENSTTRG00000003935	R3HDM1	91	69.871	ENSFALG00000013731	R3HDM1	93	58.670	Ficedula_albicollis
ENSTTRG00000003935	R3HDM1	100	82.689	ENSFDAG00000016478	R3HDM1	94	89.126	Fukomys_damarensis
ENSTTRG00000003935	R3HDM1	77	47.065	ENSFHEG00000018713	r3hdm1	99	41.729	Fundulus_heteroclitus
ENSTTRG00000003935	R3HDM1	58	63.261	ENSGMOG00000006042	-	74	63.913	Gadus_morhua
ENSTTRG00000003935	R3HDM1	100	52.677	ENSGALG00000012246	R3HDM1	99	85.902	Gallus_gallus
ENSTTRG00000003935	R3HDM1	79	48.370	ENSGAFG00000006203	r3hdm1	94	47.926	Gambusia_affinis
ENSTTRG00000003935	R3HDM1	79	49.823	ENSGACG00000014925	r3hdm1	91	49.580	Gasterosteus_aculeatus
ENSTTRG00000003935	R3HDM1	100	73.364	ENSGAGG00000007840	R3HDM1	100	72.818	Gopherus_agassizii
ENSTTRG00000003935	R3HDM1	100	87.761	ENSGGOG00000008156	R3HDM1	100	87.387	Gorilla_gorilla
ENSTTRG00000003935	R3HDM1	100	83.422	ENSHGLG00000015718	R3HDM1	100	83.598	Heterocephalus_glaber_female
ENSTTRG00000003935	R3HDM1	100	83.157	ENSHGLG00100003184	-	100	83.333	Heterocephalus_glaber_male
ENSTTRG00000003935	R3HDM1	95	73.770	ENSHGLG00100015374	-	100	73.770	Heterocephalus_glaber_male
ENSTTRG00000003935	R3HDM1	66	47.128	ENSHCOG00000013366	r3hdm1	89	59.069	Hippocampus_comes
ENSTTRG00000003935	R3HDM1	81	62.440	ENSIPUG00000001676	R3HDM1	99	54.038	Ictalurus_punctatus
ENSTTRG00000003935	R3HDM1	79	68.827	ENSIPUG00000013629	r3hdm1	90	54.707	Ictalurus_punctatus
ENSTTRG00000003935	R3HDM1	100	87.851	ENSSTOG00000007572	R3HDM1	100	87.761	Ictidomys_tridecemlineatus
ENSTTRG00000003935	R3HDM1	95	66.910	ENSLACG00000005334	R3HDM1	100	73.850	Latimeria_chalumnae
ENSTTRG00000003935	R3HDM1	100	63.036	ENSLOCG00000001641	r3hdm1	100	62.411	Lepisosteus_oculatus
ENSTTRG00000003935	R3HDM1	100	85.374	ENSLAFG00000009065	R3HDM1	99	89.459	Loxodonta_africana
ENSTTRG00000003935	R3HDM1	100	88.033	ENSMFAG00000030331	R3HDM1	100	90.394	Macaca_fascicularis
ENSTTRG00000003935	R3HDM1	100	87.477	ENSMMUG00000009844	R3HDM1	100	87.205	Macaca_mulatta
ENSTTRG00000003935	R3HDM1	100	87.851	ENSMNEG00000027793	R3HDM1	100	90.394	Macaca_nemestrina
ENSTTRG00000003935	R3HDM1	100	88.123	ENSMLEG00000043189	R3HDM1	100	87.750	Mandrillus_leucophaeus
ENSTTRG00000003935	R3HDM1	89	45.684	ENSMAMG00000004532	r3hdm1	86	63.196	Mastacembelus_armatus
ENSTTRG00000003935	R3HDM1	89	45.570	ENSMZEG00005003157	r3hdm1	86	62.590	Maylandia_zebra
ENSTTRG00000003935	R3HDM1	100	73.660	ENSMGAG00000012461	R3HDM1	100	73.660	Meleagris_gallopavo
ENSTTRG00000003935	R3HDM1	100	82.632	ENSMAUG00000010315	R3hdm1	100	82.544	Mesocricetus_auratus
ENSTTRG00000003935	R3HDM1	96	96.023	ENSMICG00000005900	-	100	87.862	Microcebus_murinus
ENSTTRG00000003935	R3HDM1	96	65.465	ENSMICG00000042655	-	100	86.453	Microcebus_murinus
ENSTTRG00000003935	R3HDM1	90	72.658	ENSMODG00000000923	R3HDM1	97	72.658	Monodelphis_domestica
ENSTTRG00000003935	R3HDM1	83	50.822	ENSMALG00000009000	r3hdm1	78	62.110	Monopterus_albus
ENSTTRG00000003935	R3HDM1	100	80.806	MGP_CAROLIEiJ_G0014543	R3hdm1	94	88.155	Mus_caroli
ENSTTRG00000003935	R3HDM1	100	80.982	ENSMUSG00000056211	R3hdm1	94	88.155	Mus_musculus
ENSTTRG00000003935	R3HDM1	100	80.982	MGP_PahariEiJ_G0027779	R3hdm1	100	82.115	Mus_pahari
ENSTTRG00000003935	R3HDM1	100	81.069	MGP_SPRETEiJ_G0015350	R3hdm1	94	88.350	Mus_spretus
ENSTTRG00000003935	R3HDM1	100	89.373	ENSMPUG00000002412	R3HDM1	100	89.373	Mustela_putorius_furo
ENSTTRG00000003935	R3HDM1	100	87.794	ENSMLUG00000013824	R3HDM1	100	87.613	Myotis_lucifugus
ENSTTRG00000003935	R3HDM1	100	87.942	ENSNLEG00000008622	R3HDM1	100	87.568	Nomascus_leucogenys
ENSTTRG00000003935	R3HDM1	89	67.008	ENSMEUG00000011784	R3HDM1	100	67.008	Notamacropus_eugenii
ENSTTRG00000003935	R3HDM1	100	82.570	ENSODEG00000008607	R3HDM1	100	82.306	Octodon_degus
ENSTTRG00000003935	R3HDM1	85	51.661	ENSONIG00000012017	r3hdm1	89	51.169	Oreochromis_niloticus
ENSTTRG00000003935	R3HDM1	100	76.247	ENSOANG00000007987	R3HDM1	100	76.337	Ornithorhynchus_anatinus
ENSTTRG00000003935	R3HDM1	89	86.165	ENSOCUG00000017366	R3HDM1	98	85.961	Oryctolagus_cuniculus
ENSTTRG00000003935	R3HDM1	77	46.765	ENSORLG00000004297	r3hdm1	86	47.146	Oryzias_latipes
ENSTTRG00000003935	R3HDM1	67	50.323	ENSORLG00015017355	r3hdm1	79	50.715	Oryzias_latipes_hsok
ENSTTRG00000003935	R3HDM1	100	87.091	ENSOGAG00000003136	R3HDM1	100	87.091	Otolemur_garnettii
ENSTTRG00000003935	R3HDM1	100	89.152	ENSOARG00000010788	R3HDM1	100	89.152	Ovis_aries
ENSTTRG00000003935	R3HDM1	100	87.964	ENSPPAG00000027858	R3HDM1	100	87.591	Pan_paniscus
ENSTTRG00000003935	R3HDM1	100	89.263	ENSPPRG00000002626	R3HDM1	100	89.263	Panthera_pardus
ENSTTRG00000003935	R3HDM1	100	89.263	ENSPTIG00000016581	R3HDM1	100	89.263	Panthera_tigris_altaica
ENSTTRG00000003935	R3HDM1	100	87.500	ENSPTRG00000012494	R3HDM1	100	87.228	Pan_troglodytes
ENSTTRG00000003935	R3HDM1	100	88.033	ENSPANG00000026448	R3HDM1	100	87.659	Papio_anubis
ENSTTRG00000003935	R3HDM1	83	76.677	ENSPKIG00000004328	r3hdm1	91	76.923	Paramormyrops_kingsleyae
ENSTTRG00000003935	R3HDM1	100	73.364	ENSPSIG00000012915	R3HDM1	100	73.364	Pelodiscus_sinensis
ENSTTRG00000003935	R3HDM1	100	81.946	ENSPEMG00000015187	R3hdm1	100	83.172	Peromyscus_maniculatus_bairdii
ENSTTRG00000003935	R3HDM1	83	41.365	ENSPMAG00000003369	-	94	42.202	Petromyzon_marinus
ENSTTRG00000003935	R3HDM1	100	79.257	ENSPCIG00000002491	R3HDM1	100	83.824	Phascolarctos_cinereus
ENSTTRG00000003935	R3HDM1	79	46.403	ENSPFOG00000015036	r3hdm1	84	61.667	Poecilia_formosa
ENSTTRG00000003935	R3HDM1	79	48.531	ENSPLAG00000018042	r3hdm1	94	48.249	Poecilia_latipinna
ENSTTRG00000003935	R3HDM1	79	48.693	ENSPMEG00000023947	r3hdm1	94	48.087	Poecilia_mexicana
ENSTTRG00000003935	R3HDM1	79	46.242	ENSPREG00000007902	r3hdm1	88	61.520	Poecilia_reticulata
ENSTTRG00000003935	R3HDM1	100	86.854	ENSPPYG00000012815	R3HDM1	100	86.673	Pongo_abelii
ENSTTRG00000003935	R3HDM1	100	76.867	ENSPCAG00000006208	R3HDM1	100	76.503	Procavia_capensis
ENSTTRG00000003935	R3HDM1	100	84.865	ENSPCOG00000012698	R3HDM1	100	84.816	Propithecus_coquereli
ENSTTRG00000003935	R3HDM1	100	79.348	ENSPVAG00000006098	R3HDM1	100	79.076	Pteropus_vampyrus
ENSTTRG00000003935	R3HDM1	100	51.836	ENSPNAG00000013952	r3hdm1	100	58.782	Pygocentrus_nattereri
ENSTTRG00000003935	R3HDM1	58	40.712	ENSPNAG00000004162	arpp21	58	45.111	Pygocentrus_nattereri
ENSTTRG00000003935	R3HDM1	83	76.603	ENSPNAG00000005436	R3HDM1	99	76.527	Pygocentrus_nattereri
ENSTTRG00000003935	R3HDM1	100	80.719	ENSRNOG00000004099	R3hdm1	100	81.850	Rattus_norvegicus
ENSTTRG00000003935	R3HDM1	100	86.322	ENSRBIG00000033317	R3HDM1	100	98.524	Rhinopithecus_bieti
ENSTTRG00000003935	R3HDM1	100	87.489	ENSRROG00000034534	R3HDM1	100	87.217	Rhinopithecus_roxellana
ENSTTRG00000003935	R3HDM1	100	87.398	ENSSBOG00000020389	R3HDM1	100	87.024	Saimiri_boliviensis_boliviensis
ENSTTRG00000003935	R3HDM1	100	79.527	ENSSHAG00000016999	R3HDM1	100	79.527	Sarcophilus_harrisii
ENSTTRG00000003935	R3HDM1	100	52.946	ENSSFOG00015019851	-	95	58.550	Scleropages_formosus
ENSTTRG00000003935	R3HDM1	93	66.506	ENSSFOG00015014134	r3hdm1	100	66.425	Scleropages_formosus
ENSTTRG00000003935	R3HDM1	84	49.879	ENSSMAG00000001669	r3hdm1	89	49.390	Scophthalmus_maximus
ENSTTRG00000003935	R3HDM1	68	50.801	ENSSDUG00000010749	r3hdm1	81	51.365	Seriola_dumerili
ENSTTRG00000003935	R3HDM1	83	51.621	ENSSLDG00000004499	r3hdm1	93	48.230	Seriola_lalandi_dorsalis
ENSTTRG00000003935	R3HDM1	60	94.958	ENSSARG00000000352	-	60	94.958	Sorex_araneus
ENSTTRG00000003935	R3HDM1	100	75.749	ENSSPUG00000004167	R3HDM1	100	75.658	Sphenodon_punctatus
ENSTTRG00000003935	R3HDM1	80	48.770	ENSSPAG00000004648	r3hdm1	91	48.017	Stegastes_partitus
ENSTTRG00000003935	R3HDM1	100	89.646	ENSSSCG00000015692	R3HDM1	100	89.646	Sus_scrofa
ENSTTRG00000003935	R3HDM1	100	68.478	ENSTGUG00000011750	R3HDM1	100	68.478	Taeniopygia_guttata
ENSTTRG00000003935	R3HDM1	79	46.378	ENSTRUG00000011654	r3hdm1	93	45.820	Takifugu_rubripes
ENSTTRG00000003935	R3HDM1	69	48.793	ENSTNIG00000010362	r3hdm1	79	48.920	Tetraodon_nigroviridis
ENSTTRG00000003935	R3HDM1	70	92.516	ENSUAMG00000024806	R3HDM1	97	89.231	Ursus_americanus
ENSTTRG00000003935	R3HDM1	100	87.545	ENSUMAG00000005552	R3HDM1	100	88.670	Ursus_maritimus
ENSTTRG00000003935	R3HDM1	93	98.246	ENSVPAG00000007333	R3HDM1	93	98.246	Vicugna_pacos
ENSTTRG00000003935	R3HDM1	100	88.203	ENSVVUG00000006457	R3HDM1	100	88.424	Vulpes_vulpes
ENSTTRG00000003935	R3HDM1	89	64.879	ENSXETG00000019330	r3hdm1	100	64.575	Xenopus_tropicalis
ENSTTRG00000003935	R3HDM1	67	50.258	ENSXCOG00000017448	r3hdm1	94	49.741	Xiphophorus_couchianus
ENSTTRG00000003935	R3HDM1	79	45.768	ENSXMAG00000007885	r3hdm1	91	46.878	Xiphophorus_maculatus