EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000004891 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 19322 bases
Position: chrscaffold_97946:30221-49542
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000004602	zf-C2H2	PF00096.26	8.2e-40	1	6
ENSTTRP00000004602	zf-C2H2	PF00096.26	8.2e-40	2	6
ENSTTRP00000004602	zf-C2H2	PF00096.26	8.2e-40	3	6
ENSTTRP00000004602	zf-C2H2	PF00096.26	8.2e-40	4	6
ENSTTRP00000004602	zf-C2H2	PF00096.26	8.2e-40	5	6
ENSTTRP00000004602	zf-C2H2	PF00096.26	8.2e-40	6	6
ENSTTRP00000004602	zf-met	PF12874.7	2e-06	1	2
ENSTTRP00000004602	zf-met	PF12874.7	2e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000004881	-	1116	-	ENSTTRP00000004602	372 (aa)	-	UPI00018B54E3

Gene Model

Click here to download ENSTTRG00000004891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000004891's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000004891	-	99	48.851	ENSTTRG00000002210	ZNF317	90	44.397
ENSTTRG00000004891	-	98	48.131	ENSTTRG00000000293	ZNF550	99	48.131
ENSTTRG00000004891	-	98	45.487	ENSTTRG00000011290	ZNF582	82	45.487
ENSTTRG00000004891	-	98	39.066	ENSTTRG00000008949	ZFP1	98	39.066
ENSTTRG00000004891	-	54	32.727	ENSTTRG00000005420	MAZ	56	30.702
ENSTTRG00000004891	-	56	52.874	ENSTTRG00000001737	ZNF768	54	50.000
ENSTTRG00000004891	-	99	45.175	ENSTTRG00000004968	ZNF2	96	42.188
ENSTTRG00000004891	-	99	55.446	ENSTTRG00000003670	ZNF226	99	55.446
ENSTTRG00000004891	-	56	47.642	ENSTTRG00000015632	-	88	47.642
ENSTTRG00000004891	-	99	41.993	ENSTTRG00000004537	ZNF699	97	41.993
ENSTTRG00000004891	-	99	41.810	ENSTTRG00000000768	-	99	41.810
ENSTTRG00000004891	-	99	55.941	ENSTTRG00000003667	ZNF234	98	55.941
ENSTTRG00000004891	-	59	42.593	ENSTTRG00000008326	ZNF574	57	43.220
ENSTTRG00000004891	-	99	54.585	ENSTTRG00000011818	ZNF233	99	54.585
ENSTTRG00000004891	-	52	46.341	ENSTTRG00000001861	ZNF784	72	48.148
ENSTTRG00000004891	-	67	44.545	ENSTTRG00000003286	ZNF236	54	41.818
ENSTTRG00000004891	-	78	53.807	ENSTTRG00000015342	-	99	53.807
ENSTTRG00000004891	-	67	52.475	ENSTTRG00000012945	ZFP69B	65	52.475
ENSTTRG00000004891	-	63	48.438	ENSTTRG00000017233	-	74	48.438
ENSTTRG00000004891	-	99	50.000	ENSTTRG00000008110	-	99	50.000
ENSTTRG00000004891	-	98	48.000	ENSTTRG00000014179	-	99	48.000
ENSTTRG00000004891	-	59	45.399	ENSTTRG00000008506	ZNF628	58	45.399
ENSTTRG00000004891	-	68	41.333	ENSTTRG00000006262	SNAI3	72	41.333
ENSTTRG00000004891	-	70	52.970	ENSTTRG00000006712	ZNF112	74	52.970
ENSTTRG00000004891	-	99	54.726	ENSTTRG00000006707	ZNF235	99	54.726
ENSTTRG00000004891	-	63	38.806	ENSTTRG00000010996	PRDM5	74	38.806
ENSTTRG00000004891	-	70	44.845	ENSTTRG00000003482	-	99	44.845
ENSTTRG00000004891	-	55	36.471	ENSTTRG00000010279	PATZ1	55	36.471
ENSTTRG00000004891	-	52	35.152	ENSTTRG00000008538	GTF3A	61	35.152
ENSTTRG00000004891	-	67	41.872	ENSTTRG00000008426	ZNF319	92	41.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000004891	-	81	53.226	ENSACIG00000017647	-	89	55.440	Amphilophus_citrinellus
ENSTTRG00000004891	-	81	48.558	ENSAOCG00000003277	-	77	52.632	Amphiprion_ocellaris
ENSTTRG00000004891	-	70	41.584	ENSAPEG00000016601	-	83	41.584	Amphiprion_percula
ENSTTRG00000004891	-	59	50.282	ENSACLG00000005615	-	53	50.568	Astatotilapia_calliptera
ENSTTRG00000004891	-	62	45.098	ENSACLG00000015989	-	90	45.714	Astatotilapia_calliptera
ENSTTRG00000004891	-	60	49.275	ENSCSAVG00000002179	-	100	49.275	Ciona_savignyi
ENSTTRG00000004891	-	70	50.568	ENSCGRG00001004047	-	67	50.568	Cricetulus_griseus_chok1gshd
ENSTTRG00000004891	-	59	46.305	ENSCSEG00000001771	-	60	46.305	Cynoglossus_semilaevis
ENSTTRG00000004891	-	70	55.000	ENSEBUG00000002589	-	77	55.000	Eptatretus_burgeri
ENSTTRG00000004891	-	68	50.249	ENSEBUG00000002537	-	87	50.249	Eptatretus_burgeri
ENSTTRG00000004891	-	62	47.761	ENSEBUG00000011244	-	78	48.515	Eptatretus_burgeri
ENSTTRG00000004891	-	63	48.780	ENSHBUG00000012758	-	88	48.780	Haplochromis_burtoni
ENSTTRG00000004891	-	59	49.718	ENSHBUG00000020071	-	53	50.000	Haplochromis_burtoni
ENSTTRG00000004891	-	62	44.608	ENSHBUG00000016546	-	66	44.608	Haplochromis_burtoni
ENSTTRG00000004891	-	62	45.098	ENSMZEG00005027844	-	66	45.098	Maylandia_zebra
ENSTTRG00000004891	-	59	49.198	ENSMZEG00005020731	-	83	49.198	Maylandia_zebra
ENSTTRG00000004891	-	75	70.588	MGP_CAROLIEiJ_G0029612	Zfp141	63	70.588	Mus_caroli
ENSTTRG00000004891	-	99	56.477	ENSMUSG00000092416	Zfp141	99	56.477	Mus_musculus
ENSTTRG00000004891	-	98	50.711	MGP_SPRETEiJ_G0030709	-	98	50.711	Mus_spretus
ENSTTRG00000004891	-	54	47.929	ENSNBRG00000023229	-	85	47.849	Neolamprologus_brichardi
ENSTTRG00000004891	-	59	49.143	ENSONIG00000018188	-	100	49.143	Oreochromis_niloticus
ENSTTRG00000004891	-	72	43.182	ENSONIG00000014100	-	90	45.631	Oreochromis_niloticus
ENSTTRG00000004891	-	62	48.544	ENSONIG00000006238	-	99	45.274	Oreochromis_niloticus
ENSTTRG00000004891	-	70	39.024	ENSPFOG00000007708	-	100	39.024	Poecilia_formosa
ENSTTRG00000004891	-	70	37.917	ENSPLAG00000010448	-	61	43.085	Poecilia_latipinna
ENSTTRG00000004891	-	56	43.787	ENSPLAG00000005897	-	50	43.787	Poecilia_latipinna
ENSTTRG00000004891	-	100	47.059	ENSPCAG00000001613	-	99	47.893	Procavia_capensis
ENSTTRG00000004891	-	62	45.098	ENSPNYG00000005671	-	74	45.098	Pundamilia_nyererei
ENSTTRG00000004891	-	55	57.143	ENSPNAG00000015131	-	97	57.143	Pygocentrus_nattereri
ENSTTRG00000004891	-	98	47.547	ENSSFOG00015000652	ZNF775	99	47.547	Scleropages_formosus
ENSTTRG00000004891	-	70	51.456	ENSSDUG00000005401	-	88	51.456	Seriola_dumerili
ENSTTRG00000004891	-	76	41.053	ENSSDUG00000004089	-	95	39.286	Seriola_dumerili
ENSTTRG00000004891	-	68	44.928	ENSSDUG00000020595	-	84	44.928	Seriola_dumerili
ENSTTRG00000004891	-	70	54.688	ENSSPUG00000007064	-	98	54.688	Sphenodon_punctatus
ENSTTRG00000004891	-	66	37.751	ENSSPAG00000009587	-	95	38.996	Stegastes_partitus
ENSTTRG00000004891	-	72	40.625	ENSXETG00000015125	-	96	40.693	Xenopus_tropicalis
ENSTTRG00000004891	-	77	56.250	ENSXETG00000030967	-	94	56.250	Xenopus_tropicalis