EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000004983 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 26784 bases
Position: chrGeneScaffold_2715:570731-597514
Accession: 30859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000004696	ResIII	PF04851.15	5.8e-26	1	2
ENSTTRP00000004696	ResIII	PF04851.15	5.8e-26	2	2
ENSTTRP00000004696	DEAD	PF00270.29	1.4e-52	1	2
ENSTTRP00000004696	DEAD	PF00270.29	1.4e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000004983	SNRNP200-201	6408	-	ENSTTRP00000004696	2135 (aa)	-	UPI00018B840E

Gene Model

Click here to download ENSTTRG00000004983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000004983's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000004983	SNRNP200	86	42.857	ENSTTRG00000008255	ASCC3	77	46.172
ENSTTRG00000004983	SNRNP200	75	31.127	ENSTTRG00000013933	HFM1	59	31.127

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000004983	SNRNP200	100	99.532	ENSG00000144028	SNRNP200	100	99.532	Homo_sapiens
ENSTTRG00000004983	SNRNP200	99	90.747	ENSAPOG00000010223	snrnp200	99	90.637	Acanthochromis_polyacanthus
ENSTTRG00000004983	SNRNP200	100	99.579	ENSAMEG00000008996	SNRNP200	100	99.579	Ailuropoda_melanoleuca
ENSTTRG00000004983	SNRNP200	97	90.096	ENSACIG00000001764	snrnp200	98	90.096	Amphilophus_citrinellus
ENSTTRG00000004983	SNRNP200	99	90.653	ENSAOCG00000024593	snrnp200	100	89.882	Amphiprion_ocellaris
ENSTTRG00000004983	SNRNP200	97	89.936	ENSAPEG00000012554	snrnp200	100	89.936	Amphiprion_percula
ENSTTRG00000004983	SNRNP200	99	90.512	ENSATEG00000022522	snrnp200	99	90.403	Anabas_testudineus
ENSTTRG00000004983	SNRNP200	99	97.407	ENSAPLG00000004313	SNRNP200	100	97.407	Anas_platyrhynchos
ENSTTRG00000004983	SNRNP200	99	97.264	ENSACAG00000000434	SNRNP200	100	97.264	Anolis_carolinensis
ENSTTRG00000004983	SNRNP200	100	95.054	ENSANAG00000036625	SNRNP200	100	95.660	Aotus_nancymaae
ENSTTRG00000004983	SNRNP200	99	90.371	ENSACLG00000011188	snrnp200	99	90.262	Astatotilapia_calliptera
ENSTTRG00000004983	SNRNP200	99	90.465	ENSAMXG00000005684	snrnp200	99	90.356	Astyanax_mexicanus
ENSTTRG00000004983	SNRNP200	100	99.017	ENSBTAG00000000848	SNRNP200	100	99.017	Bos_taurus
ENSTTRG00000004983	SNRNP200	100	99.485	ENSCJAG00000007514	SNRNP200	100	99.485	Callithrix_jacchus
ENSTTRG00000004983	SNRNP200	100	98.787	ENSCAFG00020019979	SNRNP200	100	99.825	Canis_lupus_dingo
ENSTTRG00000004983	SNRNP200	100	99.204	ENSCHIG00000020611	SNRNP200	100	99.204	Capra_hircus
ENSTTRG00000004983	SNRNP200	100	99.532	ENSTSYG00000010467	SNRNP200	100	99.532	Carlito_syrichta
ENSTTRG00000004983	SNRNP200	99	99.060	ENSCAPG00000017234	SNRNP200	99	99.060	Cavia_aperea
ENSTTRG00000004983	SNRNP200	100	99.345	ENSCPOG00000006776	SNRNP200	100	99.345	Cavia_porcellus
ENSTTRG00000004983	SNRNP200	100	99.485	ENSCCAG00000033962	SNRNP200	100	99.485	Cebus_capucinus
ENSTTRG00000004983	SNRNP200	100	99.532	ENSCATG00000015790	SNRNP200	100	99.532	Cercocebus_atys
ENSTTRG00000004983	SNRNP200	100	99.204	ENSCLAG00000004116	SNRNP200	100	99.204	Chinchilla_lanigera
ENSTTRG00000004983	SNRNP200	100	99.485	ENSCSAG00000017369	SNRNP200	100	99.485	Chlorocebus_sabaeus
ENSTTRG00000004983	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSTTRG00000004983	SNRNP200	100	97.475	ENSCPBG00000022571	SNRNP200	100	97.475	Chrysemys_picta_bellii
ENSTTRG00000004983	SNRNP200	99	76.413	ENSCING00000005082	-	99	76.553	Ciona_intestinalis
ENSTTRG00000004983	SNRNP200	100	94.068	ENSCANG00000033932	SNRNP200	99	99.502	Colobus_angolensis_palliatus
ENSTTRG00000004983	SNRNP200	100	99.391	ENSCGRG00001022610	Snrnp200	100	99.391	Cricetulus_griseus_chok1gshd
ENSTTRG00000004983	SNRNP200	100	98.831	ENSCGRG00000016472	Snrnp200	100	98.831	Cricetulus_griseus_crigri
ENSTTRG00000004983	SNRNP200	100	89.747	ENSCSEG00000016399	snrnp200	100	89.747	Cynoglossus_semilaevis
ENSTTRG00000004983	SNRNP200	100	85.487	ENSCVAG00000017631	snrnp200	99	85.487	Cyprinodon_variegatus
ENSTTRG00000004983	SNRNP200	100	90.215	ENSDARG00000077536	snrnp200	99	90.215	Danio_rerio
ENSTTRG00000004983	SNRNP200	100	97.987	ENSDNOG00000011227	SNRNP200	100	97.987	Dasypus_novemcinctus
ENSTTRG00000004983	SNRNP200	100	97.053	ENSDORG00000005861	Snrnp200	100	97.053	Dipodomys_ordii
ENSTTRG00000004983	SNRNP200	100	74.115	FBgn0263599	l(3)72Ab	99	74.022	Drosophila_melanogaster
ENSTTRG00000004983	SNRNP200	95	99.139	ENSETEG00000000162	SNRNP200	74	99.139	Echinops_telfairi
ENSTTRG00000004983	SNRNP200	83	81.345	ENSEBUG00000016524	snrnp200	95	81.345	Eptatretus_burgeri
ENSTTRG00000004983	SNRNP200	100	98.462	ENSEASG00005001884	SNRNP200	100	98.462	Equus_asinus_asinus
ENSTTRG00000004983	SNRNP200	100	99.579	ENSECAG00000019675	SNRNP200	100	99.579	Equus_caballus
ENSTTRG00000004983	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSTTRG00000004983	SNRNP200	99	90.700	ENSELUG00000018948	snrnp200	99	90.590	Esox_lucius
ENSTTRG00000004983	SNRNP200	100	99.625	ENSFCAG00000010699	SNRNP200	100	99.625	Felis_catus
ENSTTRG00000004983	SNRNP200	93	97.143	ENSFALG00000001368	-	94	97.143	Ficedula_albicollis
ENSTTRG00000004983	SNRNP200	100	99.251	ENSFDAG00000004683	SNRNP200	100	99.251	Fukomys_damarensis
ENSTTRG00000004983	SNRNP200	100	87.640	ENSFHEG00000003786	snrnp200	99	87.640	Fundulus_heteroclitus
ENSTTRG00000004983	SNRNP200	100	89.533	ENSGMOG00000004881	snrnp200	99	89.486	Gadus_morhua
ENSTTRG00000004983	SNRNP200	100	87.875	ENSGAFG00000010807	snrnp200	99	87.875	Gambusia_affinis
ENSTTRG00000004983	SNRNP200	100	89.865	ENSGACG00000011474	snrnp200	99	89.771	Gasterosteus_aculeatus
ENSTTRG00000004983	SNRNP200	96	97.635	ENSGAGG00000016069	SNRNP200	99	97.635	Gopherus_agassizii
ENSTTRG00000004983	SNRNP200	100	99.532	ENSGGOG00000005174	SNRNP200	100	99.532	Gorilla_gorilla
ENSTTRG00000004983	SNRNP200	97	87.620	ENSHBUG00000011322	snrnp200	99	87.667	Haplochromis_burtoni
ENSTTRG00000004983	SNRNP200	100	99.345	ENSHGLG00000006654	SNRNP200	100	99.345	Heterocephalus_glaber_female
ENSTTRG00000004983	SNRNP200	100	99.345	ENSHGLG00100018594	SNRNP200	100	99.345	Heterocephalus_glaber_male
ENSTTRG00000004983	SNRNP200	100	99.485	ENSSTOG00000016351	SNRNP200	100	99.485	Ictidomys_tridecemlineatus
ENSTTRG00000004983	SNRNP200	100	99.298	ENSJJAG00000023659	Snrnp200	100	99.298	Jaculus_jaculus
ENSTTRG00000004983	SNRNP200	100	87.401	ENSKMAG00000003665	snrnp200	99	87.401	Kryptolebias_marmoratus
ENSTTRG00000004983	SNRNP200	100	90.122	ENSLBEG00000021585	snrnp200	99	90.122	Labrus_bergylta
ENSTTRG00000004983	SNRNP200	82	94.664	ENSLACG00000000226	SNRNP200	99	94.664	Latimeria_chalumnae
ENSTTRG00000004983	SNRNP200	100	92.041	ENSLOCG00000015198	snrnp200	99	92.041	Lepisosteus_oculatus
ENSTTRG00000004983	SNRNP200	100	99.204	ENSLAFG00000015626	SNRNP200	100	99.204	Loxodonta_africana
ENSTTRG00000004983	SNRNP200	100	99.485	ENSMFAG00000040174	SNRNP200	100	99.485	Macaca_fascicularis
ENSTTRG00000004983	SNRNP200	100	99.485	ENSMMUG00000023261	SNRNP200	100	99.485	Macaca_mulatta
ENSTTRG00000004983	SNRNP200	100	99.438	ENSMNEG00000032398	SNRNP200	100	99.438	Macaca_nemestrina
ENSTTRG00000004983	SNRNP200	100	99.532	ENSMLEG00000019083	SNRNP200	100	99.532	Mandrillus_leucophaeus
ENSTTRG00000004983	SNRNP200	100	90.080	ENSMAMG00000007851	snrnp200	99	90.033	Mastacembelus_armatus
ENSTTRG00000004983	SNRNP200	97	87.620	ENSMZEG00005010787	snrnp200	99	87.667	Maylandia_zebra
ENSTTRG00000004983	SNRNP200	97	96.952	ENSMGAG00000001831	SNRNP200	100	96.952	Meleagris_gallopavo
ENSTTRG00000004983	SNRNP200	100	99.438	ENSMAUG00000011825	Snrnp200	100	99.438	Mesocricetus_auratus
ENSTTRG00000004983	SNRNP200	100	99.485	ENSMICG00000004710	SNRNP200	100	99.485	Microcebus_murinus
ENSTTRG00000004983	SNRNP200	100	96.863	ENSMOCG00000011814	Snrnp200	100	96.863	Microtus_ochrogaster
ENSTTRG00000004983	SNRNP200	99	88.868	ENSMMOG00000014167	snrnp200	99	88.764	Mola_mola
ENSTTRG00000004983	SNRNP200	100	98.689	ENSMODG00000008475	SNRNP200	100	98.689	Monodelphis_domestica
ENSTTRG00000004983	SNRNP200	99	90.653	ENSMALG00000001973	snrnp200	99	90.543	Monopterus_albus
ENSTTRG00000004983	SNRNP200	100	99.251	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.251	Mus_caroli
ENSTTRG00000004983	SNRNP200	100	99.298	ENSMUSG00000003660	Snrnp200	100	99.298	Mus_musculus
ENSTTRG00000004983	SNRNP200	100	99.345	MGP_PahariEiJ_G0025695	Snrnp200	100	99.345	Mus_pahari
ENSTTRG00000004983	SNRNP200	100	99.298	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.298	Mus_spretus
ENSTTRG00000004983	SNRNP200	100	99.532	ENSMPUG00000008949	SNRNP200	100	99.532	Mustela_putorius_furo
ENSTTRG00000004983	SNRNP200	100	98.878	ENSMLUG00000010493	SNRNP200	100	98.878	Myotis_lucifugus
ENSTTRG00000004983	SNRNP200	100	95.178	ENSMLUG00000027511	-	100	95.178	Myotis_lucifugus
ENSTTRG00000004983	SNRNP200	100	99.532	ENSNGAG00000021993	Snrnp200	100	99.532	Nannospalax_galili
ENSTTRG00000004983	SNRNP200	90	90.435	ENSNBRG00000017960	snrnp200	98	90.487	Neolamprologus_brichardi
ENSTTRG00000004983	SNRNP200	100	94.886	ENSNLEG00000000025	SNRNP200	100	94.886	Nomascus_leucogenys
ENSTTRG00000004983	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSTTRG00000004983	SNRNP200	100	95.599	ENSOPRG00000015464	SNRNP200	100	95.599	Ochotona_princeps
ENSTTRG00000004983	SNRNP200	100	99.204	ENSODEG00000008366	SNRNP200	100	99.204	Octodon_degus
ENSTTRG00000004983	SNRNP200	99	90.371	ENSONIG00000010714	snrnp200	99	90.262	Oreochromis_niloticus
ENSTTRG00000004983	SNRNP200	100	99.391	ENSOCUG00000009864	SNRNP200	100	99.391	Oryctolagus_cuniculus
ENSTTRG00000004983	SNRNP200	100	90.075	ENSORLG00000012286	snrnp200	100	90.075	Oryzias_latipes
ENSTTRG00000004983	SNRNP200	100	90.122	ENSORLG00020004648	snrnp200	100	90.122	Oryzias_latipes_hni
ENSTTRG00000004983	SNRNP200	100	90.075	ENSORLG00015019114	snrnp200	100	90.339	Oryzias_latipes_hsok
ENSTTRG00000004983	SNRNP200	99	90.324	ENSOMEG00000011834	snrnp200	99	90.215	Oryzias_melastigma
ENSTTRG00000004983	SNRNP200	100	99.532	ENSOGAG00000006879	SNRNP200	100	99.532	Otolemur_garnettii
ENSTTRG00000004983	SNRNP200	100	98.175	ENSOARG00000013949	SNRNP200	100	98.175	Ovis_aries
ENSTTRG00000004983	SNRNP200	100	99.532	ENSPPAG00000041559	SNRNP200	100	99.532	Pan_paniscus
ENSTTRG00000004983	SNRNP200	100	99.625	ENSPPRG00000004435	SNRNP200	100	99.625	Panthera_pardus
ENSTTRG00000004983	SNRNP200	100	99.157	ENSPTIG00000006380	SNRNP200	100	99.157	Panthera_tigris_altaica
ENSTTRG00000004983	SNRNP200	100	99.532	ENSPTRG00000012230	SNRNP200	100	99.532	Pan_troglodytes
ENSTTRG00000004983	SNRNP200	100	99.485	ENSPANG00000006017	SNRNP200	100	99.485	Papio_anubis
ENSTTRG00000004983	SNRNP200	100	90.964	ENSPKIG00000014762	snrnp200	99	90.964	Paramormyrops_kingsleyae
ENSTTRG00000004983	SNRNP200	100	96.444	ENSPSIG00000008580	SNRNP200	100	96.444	Pelodiscus_sinensis
ENSTTRG00000004983	SNRNP200	100	98.689	ENSPCIG00000023050	SNRNP200	100	98.689	Phascolarctos_cinereus
ENSTTRG00000004983	SNRNP200	100	90.220	ENSPFOG00000015110	snrnp200	99	90.220	Poecilia_formosa
ENSTTRG00000004983	SNRNP200	97	90.055	ENSPLAG00000006711	snrnp200	99	90.055	Poecilia_latipinna
ENSTTRG00000004983	SNRNP200	97	90.000	ENSPMEG00000021166	snrnp200	99	90.000	Poecilia_mexicana
ENSTTRG00000004983	SNRNP200	100	90.309	ENSPREG00000008875	snrnp200	99	90.309	Poecilia_reticulata
ENSTTRG00000004983	SNRNP200	100	99.532	ENSPPYG00000012068	SNRNP200	100	99.532	Pongo_abelii
ENSTTRG00000004983	SNRNP200	97	98.077	ENSPCAG00000008536	SNRNP200	89	98.077	Procavia_capensis
ENSTTRG00000004983	SNRNP200	100	99.532	ENSPCOG00000024608	SNRNP200	100	99.532	Propithecus_coquereli
ENSTTRG00000004983	SNRNP200	96	98.299	ENSPVAG00000005860	SNRNP200	93	98.299	Pteropus_vampyrus
ENSTTRG00000004983	SNRNP200	99	85.855	ENSPNYG00000017476	snrnp200	99	85.761	Pundamilia_nyererei
ENSTTRG00000004983	SNRNP200	100	86.002	ENSPNAG00000010998	snrnp200	99	86.002	Pygocentrus_nattereri
ENSTTRG00000004983	SNRNP200	100	99.438	ENSRNOG00000012157	Snrnp200	100	99.438	Rattus_norvegicus
ENSTTRG00000004983	SNRNP200	100	99.532	ENSRBIG00000044690	-	100	99.532	Rhinopithecus_bieti
ENSTTRG00000004983	SNRNP200	100	99.532	ENSRROG00000037952	-	100	99.532	Rhinopithecus_roxellana
ENSTTRG00000004983	SNRNP200	100	99.485	ENSSBOG00000035471	SNRNP200	100	99.485	Saimiri_boliviensis_boliviensis
ENSTTRG00000004983	SNRNP200	97	98.597	ENSSHAG00000000758	SNRNP200	100	98.597	Sarcophilus_harrisii
ENSTTRG00000004983	SNRNP200	99	91.404	ENSSFOG00015018826	snrnp200	99	91.292	Scleropages_formosus
ENSTTRG00000004983	SNRNP200	99	90.324	ENSSMAG00000005463	snrnp200	99	90.215	Scophthalmus_maximus
ENSTTRG00000004983	SNRNP200	99	90.606	ENSSDUG00000021410	snrnp200	99	90.496	Seriola_dumerili
ENSTTRG00000004983	SNRNP200	99	90.559	ENSSLDG00000010884	snrnp200	99	90.449	Seriola_lalandi_dorsalis
ENSTTRG00000004983	SNRNP200	95	97.855	ENSSARG00000010728	SNRNP200	96	97.855	Sorex_araneus
ENSTTRG00000004983	SNRNP200	100	97.378	ENSSPUG00000003726	-	100	97.378	Sphenodon_punctatus
ENSTTRG00000004983	SNRNP200	99	90.653	ENSSPAG00000001842	snrnp200	99	90.543	Stegastes_partitus
ENSTTRG00000004983	SNRNP200	100	99.438	ENSSSCG00000008127	SNRNP200	100	99.438	Sus_scrofa
ENSTTRG00000004983	SNRNP200	99	87.607	ENSTGUG00000014475	-	100	87.607	Taeniopygia_guttata
ENSTTRG00000004983	SNRNP200	99	90.277	ENSTRUG00000001307	snrnp200	99	90.169	Takifugu_rubripes
ENSTTRG00000004983	SNRNP200	100	86.117	ENSTNIG00000004320	snrnp200	100	86.117	Tetraodon_nigroviridis
ENSTTRG00000004983	SNRNP200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSTTRG00000004983	SNRNP200	75	92.919	ENSUAMG00000008395	-	95	92.919	Ursus_americanus
ENSTTRG00000004983	SNRNP200	100	99.625	ENSUMAG00000012385	SNRNP200	100	99.625	Ursus_maritimus
ENSTTRG00000004983	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSTTRG00000004983	SNRNP200	100	99.393	ENSVVUG00000026247	SNRNP200	100	99.393	Vulpes_vulpes
ENSTTRG00000004983	SNRNP200	100	94.063	ENSXETG00000001243	snrnp200	100	94.063	Xenopus_tropicalis
ENSTTRG00000004983	SNRNP200	97	90.310	ENSXMAG00000002058	snrnp200	98	90.310	Xiphophorus_maculatus