EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000005080 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 32128 bases
Position: chrGeneScaffold_3510:1942-34069
Accession: 101330346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000004775	SMN	PF06003.12	4.2e-108	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000005065	-	876	XM_019929905	ENSTTRP00000004775	291 (aa)	XP_004326811	A0A2U4AWX6

Gene Model

Click here to download ENSTTRG00000005080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000005080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000005080	-	95	84.698	ENSG00000205571	SMN2	95	84.328	Homo_sapiens
ENSTTRG00000005080	-	95	84.698	ENSG00000172062	SMN1	95	84.328	Homo_sapiens
ENSTTRG00000005080	-	91	53.309	ENSAPOG00000011324	smn1	94	54.945	Acanthochromis_polyacanthus
ENSTTRG00000005080	-	96	88.256	ENSAMEG00000003316	-	93	87.189	Ailuropoda_melanoleuca
ENSTTRG00000005080	-	87	48.889	ENSACIG00000019772	-	58	59.615	Amphilophus_citrinellus
ENSTTRG00000005080	-	91	53.309	ENSAOCG00000024444	smn1	94	54.015	Amphiprion_ocellaris
ENSTTRG00000005080	-	91	53.676	ENSAPEG00000016504	smn1	94	54.380	Amphiprion_percula
ENSTTRG00000005080	-	67	60.204	ENSAPLG00000010912	-	96	59.278	Anas_platyrhynchos
ENSTTRG00000005080	-	92	59.124	ENSACAG00000010017	-	95	58.394	Anolis_carolinensis
ENSTTRG00000005080	-	99	80.743	ENSANAG00000032133	-	95	81.851	Aotus_nancymaae
ENSTTRG00000005080	-	91	49.091	ENSACLG00000007308	smn1	53	63.462	Astatotilapia_calliptera
ENSTTRG00000005080	-	96	86.879	ENSBTAG00000005743	SMN2	98	85.816	Bos_taurus
ENSTTRG00000005080	-	95	83.333	ENSCJAG00000016290	-	94	86.250	Callithrix_jacchus
ENSTTRG00000005080	-	96	86.833	ENSCAFG00000007812	SMN	97	85.765	Canis_familiaris
ENSTTRG00000005080	-	95	86.786	ENSCAFG00020019229	-	90	85.714	Canis_lupus_dingo
ENSTTRG00000005080	-	100	86.869	ENSCHIG00000015559	-	100	85.859	Capra_hircus
ENSTTRG00000005080	-	99	83.904	ENSTSYG00000012058	-	96	86.250	Carlito_syrichta
ENSTTRG00000005080	-	75	65.778	ENSCAPG00000011021	-	96	68.692	Cavia_aperea
ENSTTRG00000005080	-	100	76.000	ENSCPOG00000012328	-	97	77.003	Cavia_porcellus
ENSTTRG00000005080	-	100	76.949	ENSCPOG00000036973	-	96	77.660	Cavia_porcellus
ENSTTRG00000005080	-	95	83.214	ENSCCAG00000018127	-	94	86.250	Cebus_capucinus
ENSTTRG00000005080	-	95	84.698	ENSCATG00000037002	-	95	85.448	Cercocebus_atys
ENSTTRG00000005080	-	100	76.431	ENSCLAG00000000284	-	96	77.113	Chinchilla_lanigera
ENSTTRG00000005080	-	95	84.342	ENSCSAG00000015688	-	95	83.986	Chlorocebus_sabaeus
ENSTTRG00000005080	-	85	75.794	ENSCHOG00000007346	-	77	96.296	Choloepus_hoffmanni
ENSTTRG00000005080	-	98	63.287	ENSCPBG00000010968	-	96	64.981	Chrysemys_picta_bellii
ENSTTRG00000005080	-	95	79.152	ENSCANG00000033324	-	91	80.741	Colobus_angolensis_palliatus
ENSTTRG00000005080	-	95	85.305	ENSCANG00000038242	-	96	85.714	Colobus_angolensis_palliatus
ENSTTRG00000005080	-	100	78.983	ENSCGRG00001017959	-	97	80.142	Cricetulus_griseus_chok1gshd
ENSTTRG00000005080	-	100	63.356	ENSCGRG00001016998	-	97	63.799	Cricetulus_griseus_chok1gshd
ENSTTRG00000005080	-	100	78.983	ENSCGRG00000007698	Smn1	97	80.142	Cricetulus_griseus_crigri
ENSTTRG00000005080	-	91	45.804	ENSCSEG00000015227	smn1	54	58.861	Cynoglossus_semilaevis
ENSTTRG00000005080	-	91	52.688	ENSCVAG00000007498	smn1	54	60.897	Cyprinodon_variegatus
ENSTTRG00000005080	-	91	50.178	ENSDARG00000018494	smn1	54	57.962	Danio_rerio
ENSTTRG00000005080	-	82	83.333	ENSDNOG00000007283	-	100	82.500	Dasypus_novemcinctus
ENSTTRG00000005080	-	75	69.406	ENSDNOG00000045949	-	76	72.527	Dasypus_novemcinctus
ENSTTRG00000005080	-	96	74.377	ENSDORG00000007082	Smn1	96	73.665	Dipodomys_ordii
ENSTTRG00000005080	-	73	69.340	ENSETEG00000001406	-	88	69.399	Echinops_telfairi
ENSTTRG00000005080	-	90	37.410	ENSEBUG00000011902	smn1	92	32.997	Eptatretus_burgeri
ENSTTRG00000005080	-	93	77.338	ENSEASG00005018000	-	93	79.087	Equus_asinus_asinus
ENSTTRG00000005080	-	95	85.461	ENSECAG00000015215	-	97	84.397	Equus_caballus
ENSTTRG00000005080	-	85	84.739	ENSEEUG00000015777	-	100	79.518	Erinaceus_europaeus
ENSTTRG00000005080	-	91	54.710	ENSELUG00000018067	smn1	94	53.506	Esox_lucius
ENSTTRG00000005080	-	100	85.085	ENSFCAG00000028292	SMN	97	85.106	Felis_catus
ENSTTRG00000005080	-	90	62.547	ENSFALG00000012320	-	94	61.654	Ficedula_albicollis
ENSTTRG00000005080	-	100	76.846	ENSFDAG00000017683	-	96	76.842	Fukomys_damarensis
ENSTTRG00000005080	-	90	50.000	ENSFHEG00000018508	smn1	96	49.814	Fundulus_heteroclitus
ENSTTRG00000005080	-	91	52.652	ENSGMOG00000017279	smn1	92	46.667	Gadus_morhua
ENSTTRG00000005080	-	91	62.782	ENSGALG00000002430	SMN	63	63.068	Gallus_gallus
ENSTTRG00000005080	-	91	53.650	ENSGAFG00000009501	smn1	59	58.333	Gambusia_affinis
ENSTTRG00000005080	-	91	57.143	ENSGACG00000010584	smn1	91	55.682	Gasterosteus_aculeatus
ENSTTRG00000005080	-	93	35.075	ENSGAGG00000013639	-	57	44.286	Gopherus_agassizii
ENSTTRG00000005080	-	97	61.620	ENSGAGG00000011374	-	94	64.179	Gopherus_agassizii
ENSTTRG00000005080	-	63	86.413	ENSGGOG00000026704	-	85	86.339	Gorilla_gorilla
ENSTTRG00000005080	-	91	78.195	ENSGGOG00000003872	-	74	86.339	Gorilla_gorilla
ENSTTRG00000005080	-	91	52.399	ENSHBUG00000013987	smn1	54	64.103	Haplochromis_burtoni
ENSTTRG00000005080	-	99	76.351	ENSHGLG00000001018	-	96	76.842	Heterocephalus_glaber_female
ENSTTRG00000005080	-	100	74.744	ENSHGLG00000001905	-	98	75.899	Heterocephalus_glaber_female
ENSTTRG00000005080	-	99	76.351	ENSHGLG00100011252	-	96	76.842	Heterocephalus_glaber_male
ENSTTRG00000005080	-	96	75.089	ENSHGLG00100018676	-	97	76.316	Heterocephalus_glaber_male
ENSTTRG00000005080	-	88	53.008	ENSHCOG00000017136	smn1	52	57.692	Hippocampus_comes
ENSTTRG00000005080	-	90	87.500	ENSSTOG00000012288	-	96	86.466	Ictidomys_tridecemlineatus
ENSTTRG00000005080	-	60	64.368	ENSJJAG00000014853	-	89	64.368	Jaculus_jaculus
ENSTTRG00000005080	-	91	51.579	ENSKMAG00000007239	smn1	96	46.212	Kryptolebias_marmoratus
ENSTTRG00000005080	-	91	53.846	ENSLBEG00000022550	smn1	56	61.111	Labrus_bergylta
ENSTTRG00000005080	-	90	38.849	ENSLACG00000009808	-	54	40.244	Latimeria_chalumnae
ENSTTRG00000005080	-	91	52.593	ENSLOCG00000011339	smn1	66	56.647	Lepisosteus_oculatus
ENSTTRG00000005080	-	100	83.502	ENSLAFG00000003425	-	93	84.155	Loxodonta_africana
ENSTTRG00000005080	-	95	85.053	ENSMFAG00000031523	SMN1	94	87.500	Macaca_fascicularis
ENSTTRG00000005080	-	95	80.427	ENSMFAG00000008812	-	95	79.004	Macaca_fascicularis
ENSTTRG00000005080	-	95	79.715	ENSMMUG00000030594	-	95	79.570	Macaca_mulatta
ENSTTRG00000005080	-	95	85.053	ENSMMUG00000020214	SMN1	94	87.500	Macaca_mulatta
ENSTTRG00000005080	-	95	84.698	ENSMNEG00000035094	-	94	87.500	Macaca_nemestrina
ENSTTRG00000005080	-	74	72.398	ENSMNEG00000036423	-	86	70.588	Macaca_nemestrina
ENSTTRG00000005080	-	95	85.053	ENSMLEG00000041902	-	95	85.821	Mandrillus_leucophaeus
ENSTTRG00000005080	-	91	53.091	ENSMAMG00000011034	smn1	54	60.897	Mastacembelus_armatus
ENSTTRG00000005080	-	54	63.462	ENSMZEG00005013634	smn1	54	63.462	Maylandia_zebra
ENSTTRG00000005080	-	67	59.278	ENSMGAG00000008889	-	95	57.216	Meleagris_gallopavo
ENSTTRG00000005080	-	100	78.305	ENSMAUG00000010262	Smn1	97	80.000	Mesocricetus_auratus
ENSTTRG00000005080	-	78	82.833	ENSMICG00000034708	-	81	87.432	Microcebus_murinus
ENSTTRG00000005080	-	100	75.932	ENSMOCG00000017833	Smn1	97	76.950	Microtus_ochrogaster
ENSTTRG00000005080	-	90	47.601	ENSMMOG00000005504	smn1	93	49.811	Mola_mola
ENSTTRG00000005080	-	100	68.942	ENSMODG00000001436	-	96	71.530	Monodelphis_domestica
ENSTTRG00000005080	-	91	52.727	ENSMALG00000008025	smn1	54	60.897	Monopterus_albus
ENSTTRG00000005080	-	100	78.716	MGP_CAROLIEiJ_G0018836	Smn1	97	79.359	Mus_caroli
ENSTTRG00000005080	-	100	78.041	ENSMUSG00000021645	Smn1	97	79.359	Mus_musculus
ENSTTRG00000005080	-	100	77.891	MGP_PahariEiJ_G0015911	Smn1	97	78.495	Mus_pahari
ENSTTRG00000005080	-	100	77.703	MGP_SPRETEiJ_G0019718	Smn1	97	79.004	Mus_spretus
ENSTTRG00000005080	-	95	88.929	ENSMPUG00000014470	-	95	89.139	Mustela_putorius_furo
ENSTTRG00000005080	-	96	85.121	ENSMLUG00000010603	-	93	83.737	Myotis_lucifugus
ENSTTRG00000005080	-	100	80.678	ENSNGAG00000019833	Smn1	97	81.915	Nannospalax_galili
ENSTTRG00000005080	-	91	56.985	ENSNBRG00000023000	smn1	54	64.744	Neolamprologus_brichardi
ENSTTRG00000005080	-	99	83.333	ENSNLEG00000004454	-	95	85.448	Nomascus_leucogenys
ENSTTRG00000005080	-	76	64.126	ENSMEUG00000011393	-	99	65.625	Notamacropus_eugenii
ENSTTRG00000005080	-	85	79.842	ENSOPRG00000002015	-	100	78.656	Ochotona_princeps
ENSTTRG00000005080	-	95	78.571	ENSODEG00000015976	-	94	79.401	Octodon_degus
ENSTTRG00000005080	-	54	63.924	ENSONIG00000011799	smn1	55	63.924	Oreochromis_niloticus
ENSTTRG00000005080	-	93	66.176	ENSOANG00000001626	-	96	67.766	Ornithorhynchus_anatinus
ENSTTRG00000005080	-	100	84.880	ENSOCUG00000017097	-	96	85.971	Oryctolagus_cuniculus
ENSTTRG00000005080	-	99	82.034	ENSOCUG00000026649	-	96	83.688	Oryctolagus_cuniculus
ENSTTRG00000005080	-	99	75.503	ENSOCUG00000025183	-	97	74.825	Oryctolagus_cuniculus
ENSTTRG00000005080	-	54	60.256	ENSORLG00000010552	smn1	54	60.256	Oryzias_latipes
ENSTTRG00000005080	-	91	53.030	ENSORLG00020007936	smn1	93	51.128	Oryzias_latipes_hni
ENSTTRG00000005080	-	54	59.615	ENSORLG00015022425	smn1	54	59.615	Oryzias_latipes_hsok
ENSTTRG00000005080	-	91	51.079	ENSOMEG00000007824	smn1	60	57.471	Oryzias_melastigma
ENSTTRG00000005080	-	90	75.000	ENSOGAG00000031414	-	94	73.897	Otolemur_garnettii
ENSTTRG00000005080	-	93	85.091	ENSOARG00000005425	-	100	84.000	Ovis_aries
ENSTTRG00000005080	-	95	84.342	ENSPPAG00000036640	-	94	85.000	Pan_paniscus
ENSTTRG00000005080	-	100	85.424	ENSPPRG00000005575	-	97	85.461	Panthera_pardus
ENSTTRG00000005080	-	100	85.135	ENSPTIG00000007745	-	97	85.512	Panthera_tigris_altaica
ENSTTRG00000005080	-	95	83.451	ENSPTRG00000016955	-	94	85.000	Pan_troglodytes
ENSTTRG00000005080	-	99	83.673	ENSPANG00000013601	-	94	87.500	Papio_anubis
ENSTTRG00000005080	-	94	80.216	ENSPANG00000000253	-	94	79.137	Papio_anubis
ENSTTRG00000005080	-	91	50.379	ENSPKIG00000011096	smn1	93	49.621	Paramormyrops_kingsleyae
ENSTTRG00000005080	-	90	61.255	ENSPSIG00000014787	-	87	59.259	Pelodiscus_sinensis
ENSTTRG00000005080	-	92	49.823	ENSPMGG00000012285	smn1	60	56.364	Periophthalmus_magnuspinnatus
ENSTTRG00000005080	-	88	40.840	ENSPMAG00000005004	smn1	55	41.104	Petromyzon_marinus
ENSTTRG00000005080	-	100	68.493	ENSPCIG00000025764	-	98	71.530	Phascolarctos_cinereus
ENSTTRG00000005080	-	91	52.708	ENSPFOG00000007786	smn1	54	59.615	Poecilia_formosa
ENSTTRG00000005080	-	91	53.069	ENSPLAG00000012071	smn1	59	59.615	Poecilia_latipinna
ENSTTRG00000005080	-	91	52.708	ENSPMEG00000017085	smn1	59	58.974	Poecilia_mexicana
ENSTTRG00000005080	-	91	54.745	ENSPREG00000005824	smn1	59	60.256	Poecilia_reticulata
ENSTTRG00000005080	-	90	83.521	ENSPPYG00000015533	-	96	82.022	Pongo_abelii
ENSTTRG00000005080	-	85	58.537	ENSPPYG00000019189	-	74	73.973	Pongo_abelii
ENSTTRG00000005080	-	90	81.716	ENSPCAG00000004187	-	100	81.343	Procavia_capensis
ENSTTRG00000005080	-	60	86.782	ENSPCOG00000022307	-	73	87.654	Propithecus_coquereli
ENSTTRG00000005080	-	95	88.214	ENSPVAG00000005977	-	96	87.189	Pteropus_vampyrus
ENSTTRG00000005080	-	91	56.985	ENSPNYG00000014148	smn1	54	64.744	Pundamilia_nyererei
ENSTTRG00000005080	-	100	76.351	ENSRNOG00000018067	Smn1	97	77.224	Rattus_norvegicus
ENSTTRG00000005080	-	95	84.698	ENSRBIG00000037052	-	92	88.158	Rhinopithecus_bieti
ENSTTRG00000005080	-	97	73.239	ENSRBIG00000036775	-	93	76.015	Rhinopithecus_bieti
ENSTTRG00000005080	-	99	70.690	ENSRROG00000031088	-	95	72.563	Rhinopithecus_roxellana
ENSTTRG00000005080	-	95	84.698	ENSRROG00000039399	-	92	88.158	Rhinopithecus_roxellana
ENSTTRG00000005080	-	82	78.088	ENSSBOG00000020112	-	87	78.088	Saimiri_boliviensis_boliviensis
ENSTTRG00000005080	-	95	83.453	ENSSBOG00000011665	-	94	85.000	Saimiri_boliviensis_boliviensis
ENSTTRG00000005080	-	100	68.942	ENSSHAG00000001499	-	97	71.429	Sarcophilus_harrisii
ENSTTRG00000005080	-	92	52.518	ENSSFOG00015015507	smn1	61	56.522	Scleropages_formosus
ENSTTRG00000005080	-	91	52.239	ENSSMAG00000007922	smn1	94	48.699	Scophthalmus_maximus
ENSTTRG00000005080	-	91	53.480	ENSSDUG00000018533	smn1	87	50.000	Seriola_dumerili
ENSTTRG00000005080	-	91	53.846	ENSSLDG00000021135	smn1	54	62.179	Seriola_lalandi_dorsalis
ENSTTRG00000005080	-	90	64.528	ENSSPUG00000000373	-	93	64.906	Sphenodon_punctatus
ENSTTRG00000005080	-	91	53.137	ENSSPAG00000004345	smn1	58	60.256	Stegastes_partitus
ENSTTRG00000005080	-	96	65.827	ENSSSCG00000029127	-	94	65.827	Sus_scrofa
ENSTTRG00000005080	-	96	86.879	ENSSSCG00000016970	-	96	85.816	Sus_scrofa
ENSTTRG00000005080	-	72	59.524	ENSSSCG00000033865	-	95	59.524	Sus_scrofa
ENSTTRG00000005080	-	93	59.498	ENSTGUG00000001548	-	63	63.636	Taeniopygia_guttata
ENSTTRG00000005080	-	57	55.152	ENSTRUG00000000736	smn	95	48.327	Takifugu_rubripes
ENSTTRG00000005080	-	63	86.413	ENSTBEG00000002399	-	88	86.339	Tupaia_belangeri
ENSTTRG00000005080	-	63	90.761	ENSUAMG00000024947	-	67	90.710	Ursus_americanus
ENSTTRG00000005080	-	96	88.968	ENSUMAG00000007842	-	72	87.900	Ursus_maritimus
ENSTTRG00000005080	-	90	75.564	ENSVPAG00000009887	-	66	100.000	Vicugna_pacos
ENSTTRG00000005080	-	96	86.833	ENSVVUG00000006934	-	97	85.765	Vulpes_vulpes
ENSTTRG00000005080	-	95	56.184	ENSXETG00000018189	smn2	62	58.889	Xenopus_tropicalis
ENSTTRG00000005080	-	91	53.986	ENSXMAG00000001521	smn1	59	59.615	Xiphophorus_maculatus