EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000005767 (Gene tree)
Gene ID: -
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 27735 bases
Position: chrGeneScaffold_1960:103485-131219
Accession: 16060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000005445	TruB_N	PF01509.18	2.2e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000005765	TRUB1-201	786	-	ENSTTRP00000005445	262 (aa)	-	UPI00018B6345

Gene Model

Click here to download ENSTTRG00000005767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000005767's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000005767	TRUB1	100	89.394	ENSG00000165832	TRUB1	72	90.438	Homo_sapiens
ENSTTRG00000005767	TRUB1	77	68.657	ENSAPOG00000020565	trub1	73	68.317	Acanthochromis_polyacanthus
ENSTTRG00000005767	TRUB1	95	93.227	ENSAMEG00000014931	TRUB1	71	89.641	Ailuropoda_melanoleuca
ENSTTRG00000005767	TRUB1	77	62.376	ENSACIG00000003060	trub1	67	62.376	Amphilophus_citrinellus
ENSTTRG00000005767	TRUB1	77	68.159	ENSAOCG00000017188	trub1	73	67.822	Amphiprion_ocellaris
ENSTTRG00000005767	TRUB1	77	67.822	ENSAPEG00000015209	trub1	73	67.822	Amphiprion_percula
ENSTTRG00000005767	TRUB1	77	69.154	ENSATEG00000023291	trub1	72	69.154	Anabas_testudineus
ENSTTRG00000005767	TRUB1	77	78.818	ENSAPLG00000006808	TRUB1	73	78.818	Anas_platyrhynchos
ENSTTRG00000005767	TRUB1	78	72.195	ENSACAG00000009282	TRUB1	74	72.195	Anolis_carolinensis
ENSTTRG00000005767	TRUB1	95	90.800	ENSANAG00000022870	TRUB1	72	92.032	Aotus_nancymaae
ENSTTRG00000005767	TRUB1	77	67.822	ENSACLG00000000823	trub1	73	67.822	Astatotilapia_calliptera
ENSTTRG00000005767	TRUB1	77	69.307	ENSAMXG00000015845	trub1	70	67.773	Astyanax_mexicanus
ENSTTRG00000005767	TRUB1	97	94.553	ENSBTAG00000012955	TRUB1	71	90.837	Bos_taurus
ENSTTRG00000005767	TRUB1	100	90.189	ENSCJAG00000047815	TRUB1	72	92.032	Callithrix_jacchus
ENSTTRG00000005767	TRUB1	100	91.288	ENSCAFG00000011688	TRUB1	72	89.641	Canis_familiaris
ENSTTRG00000005767	TRUB1	100	92.424	ENSCAFG00020013237	TRUB1	72	90.040	Canis_lupus_dingo
ENSTTRG00000005767	TRUB1	97	93.385	ENSCHIG00000020884	TRUB1	71	95.339	Capra_hircus
ENSTTRG00000005767	TRUB1	100	88.679	ENSTSYG00000000446	TRUB1	62	94.907	Carlito_syrichta
ENSTTRG00000005767	TRUB1	57	93.960	ENSCAPG00000017088	TRUB1	63	93.960	Cavia_aperea
ENSTTRG00000005767	TRUB1	94	79.675	ENSCPOG00000030129	-	76	92.308	Cavia_porcellus
ENSTTRG00000005767	TRUB1	93	82.857	ENSCPOG00000040236	-	81	92.386	Cavia_porcellus
ENSTTRG00000005767	TRUB1	95	92.430	ENSCCAG00000028842	TRUB1	72	91.633	Cebus_capucinus
ENSTTRG00000005767	TRUB1	100	91.288	ENSCATG00000033431	TRUB1	72	91.633	Cercocebus_atys
ENSTTRG00000005767	TRUB1	93	86.939	ENSCLAG00000008664	TRUB1	95	87.069	Chinchilla_lanigera
ENSTTRG00000005767	TRUB1	100	91.288	ENSCSAG00000004891	TRUB1	72	91.633	Chlorocebus_sabaeus
ENSTTRG00000005767	TRUB1	100	78.030	ENSCHOG00000011931	TRUB1	74	79.681	Choloepus_hoffmanni
ENSTTRG00000005767	TRUB1	77	80.296	ENSCPBG00000003051	TRUB1	70	80.296	Chrysemys_picta_bellii
ENSTTRG00000005767	TRUB1	100	91.288	ENSCANG00000029445	TRUB1	72	91.633	Colobus_angolensis_palliatus
ENSTTRG00000005767	TRUB1	65	89.941	ENSCGRG00001016772	-	62	77.358	Cricetulus_griseus_chok1gshd
ENSTTRG00000005767	TRUB1	74	79.487	ENSCGRG00001010322	-	55	78.947	Cricetulus_griseus_chok1gshd
ENSTTRG00000005767	TRUB1	74	91.282	ENSCGRG00000010806	Trub1	65	89.623	Cricetulus_griseus_crigri
ENSTTRG00000005767	TRUB1	81	64.319	ENSCSEG00000011261	trub1	69	64.319	Cynoglossus_semilaevis
ENSTTRG00000005767	TRUB1	77	69.154	ENSCVAG00000008791	trub1	62	69.154	Cyprinodon_variegatus
ENSTTRG00000005767	TRUB1	77	68.812	ENSDARG00000053805	trub1	76	69.608	Danio_rerio
ENSTTRG00000005767	TRUB1	97	83.922	ENSDNOG00000001069	TRUB1	71	83.871	Dasypus_novemcinctus
ENSTTRG00000005767	TRUB1	100	88.931	ENSDORG00000010431	Trub1	62	96.296	Dipodomys_ordii
ENSTTRG00000005767	TRUB1	95	92.032	ENSEASG00005014739	TRUB1	72	91.633	Equus_asinus_asinus
ENSTTRG00000005767	TRUB1	95	92.032	ENSECAG00000007177	TRUB1	72	91.633	Equus_caballus
ENSTTRG00000005767	TRUB1	100	72.527	ENSEEUG00000013993	TRUB1	60	80.841	Erinaceus_europaeus
ENSTTRG00000005767	TRUB1	77	72.277	ENSELUG00000000502	trub1	71	72.277	Esox_lucius
ENSTTRG00000005767	TRUB1	82	95.833	ENSFCAG00000031927	TRUB1	62	95.833	Felis_catus
ENSTTRG00000005767	TRUB1	66	77.907	ENSFALG00000002232	TRUB1	66	77.907	Ficedula_albicollis
ENSTTRG00000005767	TRUB1	93	84.082	ENSFDAG00000008140	TRUB1	95	87.069	Fukomys_damarensis
ENSTTRG00000005767	TRUB1	77	68.657	ENSFHEG00000004016	trub1	74	65.278	Fundulus_heteroclitus
ENSTTRG00000005767	TRUB1	77	77.340	ENSGALG00000009091	TRUB1	80	76.087	Gallus_gallus
ENSTTRG00000005767	TRUB1	77	66.502	ENSGAFG00000009193	trub1	71	66.502	Gambusia_affinis
ENSTTRG00000005767	TRUB1	58	68.874	ENSGACG00000015387	trub1	74	68.874	Gasterosteus_aculeatus
ENSTTRG00000005767	TRUB1	93	72.131	ENSGAGG00000009758	TRUB1	61	78.140	Gopherus_agassizii
ENSTTRG00000005767	TRUB1	100	89.773	ENSGGOG00000004583	TRUB1	72	90.837	Gorilla_gorilla
ENSTTRG00000005767	TRUB1	77	67.822	ENSHBUG00000016787	trub1	73	67.822	Haplochromis_burtoni
ENSTTRG00000005767	TRUB1	100	85.606	ENSHGLG00000015314	TRUB1	62	93.519	Heterocephalus_glaber_female
ENSTTRG00000005767	TRUB1	93	84.362	ENSHGLG00100009183	TRUB1	83	93.909	Heterocephalus_glaber_male
ENSTTRG00000005767	TRUB1	77	68.812	ENSHCOG00000017877	trub1	73	68.812	Hippocampus_comes
ENSTTRG00000005767	TRUB1	77	71.287	ENSIPUG00000017559	trub1	71	71.287	Ictalurus_punctatus
ENSTTRG00000005767	TRUB1	82	95.833	ENSSTOG00000003641	TRUB1	65	95.833	Ictidomys_tridecemlineatus
ENSTTRG00000005767	TRUB1	100	85.496	ENSJJAG00000011800	Trub1	63	95.327	Jaculus_jaculus
ENSTTRG00000005767	TRUB1	77	68.317	ENSKMAG00000006232	trub1	73	68.317	Kryptolebias_marmoratus
ENSTTRG00000005767	TRUB1	77	69.307	ENSLBEG00000026722	trub1	71	69.307	Labrus_bergylta
ENSTTRG00000005767	TRUB1	81	76.777	ENSLACG00000014885	TRUB1	70	76.777	Latimeria_chalumnae
ENSTTRG00000005767	TRUB1	82	71.028	ENSLOCG00000012979	trub1	73	71.028	Lepisosteus_oculatus
ENSTTRG00000005767	TRUB1	100	84.411	ENSLAFG00000015452	TRUB1	59	91.827	Loxodonta_africana
ENSTTRG00000005767	TRUB1	100	91.288	ENSMFAG00000031767	TRUB1	72	91.633	Macaca_fascicularis
ENSTTRG00000005767	TRUB1	100	91.288	ENSMMUG00000001902	TRUB1	72	91.633	Macaca_mulatta
ENSTTRG00000005767	TRUB1	100	85.985	ENSMNEG00000044646	TRUB1	71	86.056	Macaca_nemestrina
ENSTTRG00000005767	TRUB1	100	91.288	ENSMLEG00000042655	TRUB1	72	91.235	Mandrillus_leucophaeus
ENSTTRG00000005767	TRUB1	77	67.822	ENSMZEG00005024095	trub1	73	67.822	Maylandia_zebra
ENSTTRG00000005767	TRUB1	77	77.833	ENSMGAG00000011135	TRUB1	70	77.833	Meleagris_gallopavo
ENSTTRG00000005767	TRUB1	81	87.324	ENSMAUG00000011101	Trub1	63	87.442	Mesocricetus_auratus
ENSTTRG00000005767	TRUB1	100	92.424	ENSMICG00000016324	TRUB1	72	90.837	Microcebus_murinus
ENSTTRG00000005767	TRUB1	100	81.679	ENSMOCG00000017759	Trub1	65	90.741	Microtus_ochrogaster
ENSTTRG00000005767	TRUB1	77	91.045	ENSMODG00000009676	TRUB1	58	88.152	Monodelphis_domestica
ENSTTRG00000005767	TRUB1	100	81.679	MGP_CAROLIEiJ_G0023100	Trub1	81	89.055	Mus_caroli
ENSTTRG00000005767	TRUB1	100	80.916	ENSMUSG00000025086	Trub1	81	88.060	Mus_musculus
ENSTTRG00000005767	TRUB1	100	82.443	MGP_PahariEiJ_G0014588	Trub1	64	91.204	Mus_pahari
ENSTTRG00000005767	TRUB1	100	80.916	MGP_SPRETEiJ_G0024021	Trub1	81	88.060	Mus_spretus
ENSTTRG00000005767	TRUB1	82	98.148	ENSMPUG00000003556	TRUB1	62	98.148	Mustela_putorius_furo
ENSTTRG00000005767	TRUB1	94	88.211	ENSMLUG00000017686	TRUB1	71	86.747	Myotis_lucifugus
ENSTTRG00000005767	TRUB1	100	84.091	ENSNGAG00000018682	Trub1	62	93.519	Nannospalax_galili
ENSTTRG00000005767	TRUB1	77	67.822	ENSNBRG00000023393	trub1	72	67.822	Neolamprologus_brichardi
ENSTTRG00000005767	TRUB1	95	90.438	ENSNLEG00000016345	TRUB1	72	90.438	Nomascus_leucogenys
ENSTTRG00000005767	TRUB1	77	91.045	ENSMEUG00000006603	TRUB1	78	88.152	Notamacropus_eugenii
ENSTTRG00000005767	TRUB1	100	79.008	ENSOPRG00000009371	TRUB1	63	88.426	Ochotona_princeps
ENSTTRG00000005767	TRUB1	100	82.955	ENSODEG00000010854	TRUB1	61	91.121	Octodon_degus
ENSTTRG00000005767	TRUB1	77	67.327	ENSONIG00000007249	trub1	73	67.327	Oreochromis_niloticus
ENSTTRG00000005767	TRUB1	78	82.439	ENSOANG00000001556	TRUB1	68	82.439	Ornithorhynchus_anatinus
ENSTTRG00000005767	TRUB1	82	90.278	ENSOCUG00000009456	TRUB1	62	90.278	Oryctolagus_cuniculus
ENSTTRG00000005767	TRUB1	77	69.652	ENSORLG00000029719	trub1	72	69.652	Oryzias_latipes
ENSTTRG00000005767	TRUB1	77	69.154	ENSORLG00020016767	trub1	71	69.154	Oryzias_latipes_hni
ENSTTRG00000005767	TRUB1	77	69.154	ENSORLG00015014728	trub1	72	69.154	Oryzias_latipes_hsok
ENSTTRG00000005767	TRUB1	84	66.516	ENSOMEG00000014556	trub1	75	67.130	Oryzias_melastigma
ENSTTRG00000005767	TRUB1	100	92.424	ENSOGAG00000015895	TRUB1	72	92.032	Otolemur_garnettii
ENSTTRG00000005767	TRUB1	100	90.637	ENSOARG00000015591	TRUB1	71	91.732	Ovis_aries
ENSTTRG00000005767	TRUB1	100	89.773	ENSPPAG00000043645	TRUB1	72	90.837	Pan_paniscus
ENSTTRG00000005767	TRUB1	95	91.633	ENSPPRG00000007096	TRUB1	72	88.048	Panthera_pardus
ENSTTRG00000005767	TRUB1	95	92.032	ENSPTIG00000006378	TRUB1	72	88.446	Panthera_tigris_altaica
ENSTTRG00000005767	TRUB1	100	89.773	ENSPTRG00000002964	TRUB1	72	90.837	Pan_troglodytes
ENSTTRG00000005767	TRUB1	100	90.909	ENSPANG00000020712	TRUB1	62	97.222	Papio_anubis
ENSTTRG00000005767	TRUB1	77	78.818	ENSPSIG00000012877	TRUB1	70	78.818	Pelodiscus_sinensis
ENSTTRG00000005767	TRUB1	77	65.842	ENSPMGG00000000075	trub1	73	65.842	Periophthalmus_magnuspinnatus
ENSTTRG00000005767	TRUB1	100	81.679	ENSPEMG00000011156	Trub1	63	88.837	Peromyscus_maniculatus_bairdii
ENSTTRG00000005767	TRUB1	77	91.045	ENSPCIG00000009729	TRUB1	56	89.372	Phascolarctos_cinereus
ENSTTRG00000005767	TRUB1	77	68.317	ENSPFOG00000009950	trub1	74	68.317	Poecilia_formosa
ENSTTRG00000005767	TRUB1	77	68.317	ENSPLAG00000013855	trub1	71	68.317	Poecilia_latipinna
ENSTTRG00000005767	TRUB1	77	68.317	ENSPMEG00000009064	trub1	73	68.317	Poecilia_mexicana
ENSTTRG00000005767	TRUB1	77	68.812	ENSPREG00000003343	trub1	73	68.812	Poecilia_reticulata
ENSTTRG00000005767	TRUB1	95	89.243	ENSPPYG00000002676	TRUB1	72	90.040	Pongo_abelii
ENSTTRG00000005767	TRUB1	93	83.468	ENSPCAG00000008427	TRUB1	66	83.761	Procavia_capensis
ENSTTRG00000005767	TRUB1	100	85.985	ENSPCOG00000024360	TRUB1	70	84.000	Propithecus_coquereli
ENSTTRG00000005767	TRUB1	100	90.530	ENSPVAG00000007575	TRUB1	95	92.032	Pteropus_vampyrus
ENSTTRG00000005767	TRUB1	77	67.822	ENSPNYG00000018614	trub1	73	67.822	Pundamilia_nyererei
ENSTTRG00000005767	TRUB1	77	59.204	ENSPNAG00000006881	trub1	62	59.204	Pygocentrus_nattereri
ENSTTRG00000005767	TRUB1	100	83.588	ENSRNOG00000017321	Trub1	63	91.667	Rattus_norvegicus
ENSTTRG00000005767	TRUB1	100	78.030	ENSRBIG00000033423	TRUB1	69	77.689	Rhinopithecus_bieti
ENSTTRG00000005767	TRUB1	100	90.909	ENSRROG00000033902	TRUB1	72	91.235	Rhinopithecus_roxellana
ENSTTRG00000005767	TRUB1	95	90.837	ENSSBOG00000024237	TRUB1	72	92.032	Saimiri_boliviensis_boliviensis
ENSTTRG00000005767	TRUB1	65	90.533	ENSSHAG00000009346	TRUB1	57	90.533	Sarcophilus_harrisii
ENSTTRG00000005767	TRUB1	77	68.812	ENSSFOG00015022124	trub1	69	68.812	Scleropages_formosus
ENSTTRG00000005767	TRUB1	77	69.307	ENSSMAG00000001020	trub1	72	69.307	Scophthalmus_maximus
ENSTTRG00000005767	TRUB1	75	69.898	ENSSDUG00000016414	trub1	73	69.802	Seriola_dumerili
ENSTTRG00000005767	TRUB1	75	70.408	ENSSLDG00000015486	trub1	73	70.297	Seriola_lalandi_dorsalis
ENSTTRG00000005767	TRUB1	77	81.281	ENSSPUG00000001642	TRUB1	72	79.048	Sphenodon_punctatus
ENSTTRG00000005767	TRUB1	77	68.812	ENSSPAG00000001217	trub1	73	68.812	Stegastes_partitus
ENSTTRG00000005767	TRUB1	100	90.152	ENSSSCG00000010653	TRUB1	73	86.454	Sus_scrofa
ENSTTRG00000005767	TRUB1	77	77.114	ENSTGUG00000010971	TRUB1	72	76.847	Taeniopygia_guttata
ENSTTRG00000005767	TRUB1	64	77.381	ENSTBEG00000002880	TRUB1	66	77.381	Tupaia_belangeri
ENSTTRG00000005767	TRUB1	95	94.422	ENSUAMG00000024876	TRUB1	72	90.438	Ursus_americanus
ENSTTRG00000005767	TRUB1	80	98.095	ENSUMAG00000002411	TRUB1	82	91.346	Ursus_maritimus
ENSTTRG00000005767	TRUB1	100	94.697	ENSVPAG00000005507	TRUB1	72	90.837	Vicugna_pacos
ENSTTRG00000005767	TRUB1	100	91.603	ENSVVUG00000010085	TRUB1	60	92.771	Vulpes_vulpes
ENSTTRG00000005767	TRUB1	77	70.443	ENSXETG00000023828	trub1	73	70.443	Xenopus_tropicalis
ENSTTRG00000005767	TRUB1	77	68.317	ENSXCOG00000017847	trub1	71	68.317	Xiphophorus_couchianus
ENSTTRG00000005767	TRUB1	77	68.317	ENSXMAG00000014701	trub1	73	68.317	Xiphophorus_maculatus