EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000005855 (Gene tree)
Gene ID: -
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 46204 bases
Position: chrGeneScaffold_2120:173915-220118
Accession: 10770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000005537	CPSF_A	PF03178.15	1.6e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000005856	SF3B3-201	3645	-	ENSTTRP00000005537	1214 (aa)	-	UPI00018B88FC

Gene Model

Click here to download ENSTTRG00000005855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000005855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000005855	SF3B3	100	99.096	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSTTRG00000005855	SF3B3	96	92.741	ENSAPOG00000006172	sf3b3	98	92.741	Acanthochromis_polyacanthus
ENSTTRG00000005855	SF3B3	100	98.934	ENSAMEG00000002187	SF3B3	100	98.934	Ailuropoda_melanoleuca
ENSTTRG00000005855	SF3B3	92	89.821	ENSACIG00000016487	sf3b3	100	89.821	Amphilophus_citrinellus
ENSTTRG00000005855	SF3B3	100	92.687	ENSAOCG00000007158	sf3b3	100	92.687	Amphiprion_ocellaris
ENSTTRG00000005855	SF3B3	100	92.687	ENSAPEG00000022786	sf3b3	100	92.687	Amphiprion_percula
ENSTTRG00000005855	SF3B3	100	92.769	ENSATEG00000013708	sf3b3	100	92.769	Anabas_testudineus
ENSTTRG00000005855	SF3B3	81	97.062	ENSAPLG00000004996	SF3B3	100	97.062	Anas_platyrhynchos
ENSTTRG00000005855	SF3B3	100	97.864	ENSACAG00000001817	SF3B3	100	97.864	Anolis_carolinensis
ENSTTRG00000005855	SF3B3	100	99.096	ENSANAG00000028001	SF3B3	100	99.096	Aotus_nancymaae
ENSTTRG00000005855	SF3B3	96	92.400	ENSACLG00000022555	sf3b3	98	92.400	Astatotilapia_calliptera
ENSTTRG00000005855	SF3B3	100	92.440	ENSAMXG00000003410	sf3b3	100	92.440	Astyanax_mexicanus
ENSTTRG00000005855	SF3B3	100	99.096	ENSBTAG00000010627	SF3B3	100	99.096	Bos_taurus
ENSTTRG00000005855	SF3B3	100	59.967	WBGene00019323	teg-4	100	59.967	Caenorhabditis_elegans
ENSTTRG00000005855	SF3B3	100	99.096	ENSCJAG00000014773	SF3B3	99	99.096	Callithrix_jacchus
ENSTTRG00000005855	SF3B3	100	99.178	ENSCAFG00000020151	SF3B3	100	99.178	Canis_familiaris
ENSTTRG00000005855	SF3B3	100	99.178	ENSCAFG00020020912	SF3B3	100	99.178	Canis_lupus_dingo
ENSTTRG00000005855	SF3B3	100	99.178	ENSCHIG00000019822	SF3B3	100	99.178	Capra_hircus
ENSTTRG00000005855	SF3B3	100	99.096	ENSTSYG00000007910	SF3B3	100	99.096	Carlito_syrichta
ENSTTRG00000005855	SF3B3	84	89.016	ENSCAPG00000001484	SF3B3	92	89.016	Cavia_aperea
ENSTTRG00000005855	SF3B3	100	98.107	ENSCPOG00000000586	SF3B3	100	98.107	Cavia_porcellus
ENSTTRG00000005855	SF3B3	100	99.096	ENSCCAG00000017736	SF3B3	100	99.096	Cebus_capucinus
ENSTTRG00000005855	SF3B3	100	99.096	ENSCATG00000036562	SF3B3	100	99.096	Cercocebus_atys
ENSTTRG00000005855	SF3B3	100	99.096	ENSCLAG00000003921	SF3B3	100	99.096	Chinchilla_lanigera
ENSTTRG00000005855	SF3B3	100	99.014	ENSCSAG00000004371	SF3B3	100	99.014	Chlorocebus_sabaeus
ENSTTRG00000005855	SF3B3	90	92.835	ENSCHOG00000001878	SF3B3	90	92.835	Choloepus_hoffmanni
ENSTTRG00000005855	SF3B3	100	98.110	ENSCPBG00000015853	SF3B3	100	98.110	Chrysemys_picta_bellii
ENSTTRG00000005855	SF3B3	100	80.213	ENSCING00000001342	-	100	80.213	Ciona_intestinalis
ENSTTRG00000005855	SF3B3	99	78.900	ENSCSAVG00000011454	-	100	78.900	Ciona_savignyi
ENSTTRG00000005855	SF3B3	100	95.809	ENSCANG00000042920	SF3B3	100	95.809	Colobus_angolensis_palliatus
ENSTTRG00000005855	SF3B3	100	99.014	ENSCGRG00001015908	Sf3b3	100	99.014	Cricetulus_griseus_chok1gshd
ENSTTRG00000005855	SF3B3	100	99.014	ENSCGRG00000010180	Sf3b3	100	99.014	Cricetulus_griseus_crigri
ENSTTRG00000005855	SF3B3	82	91.617	ENSCSEG00000014192	sf3b3	99	91.617	Cynoglossus_semilaevis
ENSTTRG00000005855	SF3B3	100	91.865	ENSCVAG00000010459	sf3b3	100	91.865	Cyprinodon_variegatus
ENSTTRG00000005855	SF3B3	100	92.687	ENSDARG00000103553	sf3b3	100	92.687	Danio_rerio
ENSTTRG00000005855	SF3B3	85	98.939	ENSDNOG00000043626	SF3B3	100	98.939	Dasypus_novemcinctus
ENSTTRG00000005855	SF3B3	100	99.096	ENSDORG00000014176	Sf3b3	100	99.096	Dipodomys_ordii
ENSTTRG00000005855	SF3B3	100	74.572	FBgn0035162	Sf3b3	100	74.572	Drosophila_melanogaster
ENSTTRG00000005855	SF3B3	84	100.000	ENSETEG00000002729	SF3B3	84	100.000	Echinops_telfairi
ENSTTRG00000005855	SF3B3	100	87.017	ENSEBUG00000006117	sf3b3	100	87.017	Eptatretus_burgeri
ENSTTRG00000005855	SF3B3	100	99.178	ENSEASG00005013376	SF3B3	100	99.178	Equus_asinus_asinus
ENSTTRG00000005855	SF3B3	100	99.178	ENSECAG00000014053	SF3B3	100	99.178	Equus_caballus
ENSTTRG00000005855	SF3B3	93	99.821	ENSEEUG00000015611	SF3B3	93	99.821	Erinaceus_europaeus
ENSTTRG00000005855	SF3B3	100	90.738	ENSELUG00000015417	sf3b3	100	90.738	Esox_lucius
ENSTTRG00000005855	SF3B3	100	99.178	ENSFCAG00000009487	SF3B3	100	99.178	Felis_catus
ENSTTRG00000005855	SF3B3	100	98.192	ENSFALG00000007372	SF3B3	100	98.192	Ficedula_albicollis
ENSTTRG00000005855	SF3B3	100	99.014	ENSFDAG00000002608	SF3B3	100	99.014	Fukomys_damarensis
ENSTTRG00000005855	SF3B3	100	92.276	ENSFHEG00000017824	sf3b3	100	92.276	Fundulus_heteroclitus
ENSTTRG00000005855	SF3B3	100	89.080	ENSGMOG00000008139	sf3b3	100	89.080	Gadus_morhua
ENSTTRG00000005855	SF3B3	100	98.274	ENSGALG00000002531	SF3B3	100	98.274	Gallus_gallus
ENSTTRG00000005855	SF3B3	100	91.865	ENSGAFG00000015206	sf3b3	100	91.865	Gambusia_affinis
ENSTTRG00000005855	SF3B3	100	92.282	ENSGACG00000002646	sf3b3	100	92.282	Gasterosteus_aculeatus
ENSTTRG00000005855	SF3B3	96	98.121	ENSGAGG00000006746	SF3B3	97	98.121	Gopherus_agassizii
ENSTTRG00000005855	SF3B3	100	99.096	ENSGGOG00000003246	SF3B3	100	99.096	Gorilla_gorilla
ENSTTRG00000005855	SF3B3	92	84.911	ENSHBUG00000005960	sf3b3	100	86.071	Haplochromis_burtoni
ENSTTRG00000005855	SF3B3	100	99.096	ENSHGLG00000010135	SF3B3	100	99.096	Heterocephalus_glaber_female
ENSTTRG00000005855	SF3B3	100	96.918	ENSHGLG00100011148	SF3B3	100	96.918	Heterocephalus_glaber_male
ENSTTRG00000005855	SF3B3	100	92.030	ENSHCOG00000011981	sf3b3	100	92.030	Hippocampus_comes
ENSTTRG00000005855	SF3B3	100	92.358	ENSIPUG00000020435	sf3b3	100	92.358	Ictalurus_punctatus
ENSTTRG00000005855	SF3B3	100	99.096	ENSSTOG00000007065	SF3B3	100	99.096	Ictidomys_tridecemlineatus
ENSTTRG00000005855	SF3B3	100	99.096	ENSJJAG00000003948	Sf3b3	100	99.096	Jaculus_jaculus
ENSTTRG00000005855	SF3B3	100	90.058	ENSKMAG00000004066	sf3b3	99	92.229	Kryptolebias_marmoratus
ENSTTRG00000005855	SF3B3	100	92.194	ENSLBEG00000018302	sf3b3	100	92.194	Labrus_bergylta
ENSTTRG00000005855	SF3B3	98	91.528	ENSLACG00000012501	SF3B3	99	91.528	Latimeria_chalumnae
ENSTTRG00000005855	SF3B3	100	93.350	ENSLOCG00000007566	sf3b3	100	93.350	Lepisosteus_oculatus
ENSTTRG00000005855	SF3B3	100	99.178	ENSLAFG00000012219	SF3B3	100	99.178	Loxodonta_africana
ENSTTRG00000005855	SF3B3	100	99.096	ENSMFAG00000045487	SF3B3	100	99.096	Macaca_fascicularis
ENSTTRG00000005855	SF3B3	100	99.096	ENSMMUG00000017812	SF3B3	100	99.096	Macaca_mulatta
ENSTTRG00000005855	SF3B3	100	99.096	ENSMNEG00000033385	SF3B3	100	99.096	Macaca_nemestrina
ENSTTRG00000005855	SF3B3	100	95.563	ENSMLEG00000043891	SF3B3	97	99.682	Mandrillus_leucophaeus
ENSTTRG00000005855	SF3B3	100	92.769	ENSMAMG00000016837	sf3b3	100	92.769	Mastacembelus_armatus
ENSTTRG00000005855	SF3B3	89	89.362	ENSMZEG00005026015	sf3b3	99	89.362	Maylandia_zebra
ENSTTRG00000005855	SF3B3	100	92.358	ENSMZEG00005010836	sf3b3	100	92.358	Maylandia_zebra
ENSTTRG00000005855	SF3B3	100	98.274	ENSMGAG00000001597	SF3B3	100	98.274	Meleagris_gallopavo
ENSTTRG00000005855	SF3B3	81	83.069	ENSMAUG00000013618	Sf3b3	95	83.069	Mesocricetus_auratus
ENSTTRG00000005855	SF3B3	100	97.949	ENSMICG00000001363	SF3B3	100	97.949	Microcebus_murinus
ENSTTRG00000005855	SF3B3	100	99.014	ENSMOCG00000006108	Sf3b3	100	99.014	Microtus_ochrogaster
ENSTTRG00000005855	SF3B3	89	89.732	ENSMMOG00000002598	sf3b3	97	89.732	Mola_mola
ENSTTRG00000005855	SF3B3	100	94.581	ENSMODG00000014363	SF3B3	100	94.581	Monodelphis_domestica
ENSTTRG00000005855	SF3B3	100	92.440	ENSMALG00000008014	sf3b3	100	92.440	Monopterus_albus
ENSTTRG00000005855	SF3B3	100	98.932	MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.932	Mus_caroli
ENSTTRG00000005855	SF3B3	100	99.014	ENSMUSG00000033732	Sf3b3	100	99.014	Mus_musculus
ENSTTRG00000005855	SF3B3	100	98.932	MGP_SPRETEiJ_G0032681	Sf3b3	100	98.932	Mus_spretus
ENSTTRG00000005855	SF3B3	100	99.178	ENSMPUG00000010277	SF3B3	100	99.178	Mustela_putorius_furo
ENSTTRG00000005855	SF3B3	100	98.932	ENSMLUG00000014607	SF3B3	100	98.932	Myotis_lucifugus
ENSTTRG00000005855	SF3B3	100	99.096	ENSNGAG00000021903	Sf3b3	100	99.096	Nannospalax_galili
ENSTTRG00000005855	SF3B3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSTTRG00000005855	SF3B3	100	97.619	ENSNLEG00000016127	SF3B3	99	99.682	Nomascus_leucogenys
ENSTTRG00000005855	SF3B3	92	99.208	ENSMEUG00000004479	SF3B3	94	99.208	Notamacropus_eugenii
ENSTTRG00000005855	SF3B3	98	95.809	ENSOPRG00000009847	SF3B3	100	95.809	Ochotona_princeps
ENSTTRG00000005855	SF3B3	100	99.014	ENSODEG00000014154	SF3B3	100	99.014	Octodon_degus
ENSTTRG00000005855	SF3B3	100	92.605	ENSONIG00000011198	sf3b3	100	92.605	Oreochromis_niloticus
ENSTTRG00000005855	SF3B3	100	98.932	ENSOANG00000001161	-	100	98.932	Ornithorhynchus_anatinus
ENSTTRG00000005855	SF3B3	100	96.713	ENSOCUG00000004139	SF3B3	100	96.713	Oryctolagus_cuniculus
ENSTTRG00000005855	SF3B3	100	92.523	ENSORLG00000013472	sf3b3	100	92.523	Oryzias_latipes
ENSTTRG00000005855	SF3B3	100	92.523	ENSORLG00020017473	sf3b3	100	92.523	Oryzias_latipes_hni
ENSTTRG00000005855	SF3B3	100	92.523	ENSORLG00015007710	sf3b3	100	92.523	Oryzias_latipes_hsok
ENSTTRG00000005855	SF3B3	100	92.194	ENSOMEG00000014483	sf3b3	100	92.194	Oryzias_melastigma
ENSTTRG00000005855	SF3B3	100	98.689	ENSOGAG00000016051	SF3B3	100	98.689	Otolemur_garnettii
ENSTTRG00000005855	SF3B3	100	98.934	ENSOARG00000004816	SF3B3	100	98.934	Ovis_aries
ENSTTRG00000005855	SF3B3	100	99.096	ENSPPAG00000026807	SF3B3	100	99.096	Pan_paniscus
ENSTTRG00000005855	SF3B3	100	99.178	ENSPPRG00000001686	SF3B3	100	99.178	Panthera_pardus
ENSTTRG00000005855	SF3B3	89	96.044	ENSPTIG00000020382	SF3B3	100	96.044	Panthera_tigris_altaica
ENSTTRG00000005855	SF3B3	100	99.096	ENSPTRG00000008308	SF3B3	100	99.096	Pan_troglodytes
ENSTTRG00000005855	SF3B3	100	99.096	ENSPANG00000024075	SF3B3	100	99.096	Papio_anubis
ENSTTRG00000005855	SF3B3	100	91.865	ENSPKIG00000002712	sf3b3	100	91.865	Paramormyrops_kingsleyae
ENSTTRG00000005855	SF3B3	89	98.160	ENSPSIG00000002232	SF3B3	100	98.160	Pelodiscus_sinensis
ENSTTRG00000005855	SF3B3	100	99.014	ENSPEMG00000008603	Sf3b3	100	99.014	Peromyscus_maniculatus_bairdii
ENSTTRG00000005855	SF3B3	100	91.126	ENSPMAG00000001793	sf3b3	100	91.126	Petromyzon_marinus
ENSTTRG00000005855	SF3B3	100	98.932	ENSPCIG00000014927	SF3B3	100	98.932	Phascolarctos_cinereus
ENSTTRG00000005855	SF3B3	100	91.947	ENSPFOG00000015516	sf3b3	100	91.947	Poecilia_formosa
ENSTTRG00000005855	SF3B3	100	91.947	ENSPLAG00000014330	sf3b3	100	91.947	Poecilia_latipinna
ENSTTRG00000005855	SF3B3	100	92.030	ENSPMEG00000019856	sf3b3	100	92.030	Poecilia_mexicana
ENSTTRG00000005855	SF3B3	81	92.683	ENSPREG00000019669	sf3b3	97	92.683	Poecilia_reticulata
ENSTTRG00000005855	SF3B3	95	99.254	ENSPPYG00000007539	SF3B3	100	99.254	Pongo_abelii
ENSTTRG00000005855	SF3B3	100	77.896	ENSPCAG00000002623	SF3B3	100	77.896	Procavia_capensis
ENSTTRG00000005855	SF3B3	85	99.664	ENSPCOG00000026582	SF3B3	100	99.664	Propithecus_coquereli
ENSTTRG00000005855	SF3B3	100	99.096	ENSPVAG00000000684	SF3B3	100	99.096	Pteropus_vampyrus
ENSTTRG00000005855	SF3B3	100	92.440	ENSPNYG00000003528	sf3b3	100	92.440	Pundamilia_nyererei
ENSTTRG00000005855	SF3B3	100	92.605	ENSPNAG00000015419	sf3b3	100	92.605	Pygocentrus_nattereri
ENSTTRG00000005855	SF3B3	100	99.014	ENSRNOG00000017724	Sf3b3	100	99.014	Rattus_norvegicus
ENSTTRG00000005855	SF3B3	100	99.096	ENSRBIG00000021904	SF3B3	100	99.096	Rhinopithecus_bieti
ENSTTRG00000005855	SF3B3	100	99.096	ENSRROG00000045703	SF3B3	100	99.096	Rhinopithecus_roxellana
ENSTTRG00000005855	SF3B3	100	99.096	ENSSBOG00000029156	SF3B3	100	99.096	Saimiri_boliviensis_boliviensis
ENSTTRG00000005855	SF3B3	100	98.932	ENSSHAG00000000372	SF3B3	100	98.932	Sarcophilus_harrisii
ENSTTRG00000005855	SF3B3	100	93.016	ENSSFOG00015012877	sf3b3	100	93.016	Scleropages_formosus
ENSTTRG00000005855	SF3B3	100	92.112	ENSSMAG00000014386	sf3b3	100	92.112	Scophthalmus_maximus
ENSTTRG00000005855	SF3B3	100	92.851	ENSSDUG00000021201	sf3b3	100	92.851	Seriola_dumerili
ENSTTRG00000005855	SF3B3	100	92.769	ENSSLDG00000017532	sf3b3	100	92.769	Seriola_lalandi_dorsalis
ENSTTRG00000005855	SF3B3	93	100.000	ENSSARG00000006917	SF3B3	93	100.000	Sorex_araneus
ENSTTRG00000005855	SF3B3	100	98.192	ENSSPUG00000006253	SF3B3	100	98.192	Sphenodon_punctatus
ENSTTRG00000005855	SF3B3	100	84.963	ENSSPAG00000003125	sf3b3	100	84.963	Stegastes_partitus
ENSTTRG00000005855	SF3B3	100	99.178	ENSSSCG00000025323	SF3B3	100	99.178	Sus_scrofa
ENSTTRG00000005855	SF3B3	100	98.358	ENSTGUG00000006082	SF3B3	100	98.358	Taeniopygia_guttata
ENSTTRG00000005855	SF3B3	89	92.279	ENSTNIG00000004857	sf3b3	100	92.279	Tetraodon_nigroviridis
ENSTTRG00000005855	SF3B3	93	83.803	ENSTBEG00000002946	SF3B3	100	83.803	Tupaia_belangeri
ENSTTRG00000005855	SF3B3	100	99.178	ENSUAMG00000006780	SF3B3	100	99.178	Ursus_americanus
ENSTTRG00000005855	SF3B3	100	99.178	ENSUMAG00000017757	SF3B3	100	99.178	Ursus_maritimus
ENSTTRG00000005855	SF3B3	100	83.402	ENSVPAG00000003202	SF3B3	100	83.402	Vicugna_pacos
ENSTTRG00000005855	SF3B3	100	99.096	ENSVVUG00000017922	SF3B3	100	99.096	Vulpes_vulpes
ENSTTRG00000005855	SF3B3	100	95.974	ENSXETG00000032869	SF3B3	100	95.974	Xenopus_tropicalis
ENSTTRG00000005855	SF3B3	77	93.206	ENSXCOG00000013628	sf3b3	97	93.206	Xiphophorus_couchianus
ENSTTRG00000005855	SF3B3	100	91.947	ENSXMAG00000006334	sf3b3	100	91.947	Xiphophorus_maculatus