EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000006168 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 62479 bases
Position: chrGeneScaffold_561:270803-333281
Accession: 11097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000005834	ResIII	PF04851.15	6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000006168	SMARCA1-201	2955	-	ENSTTRP00000005834	984 (aa)	-	UPI00018B7FAB

Gene Model

Click here to download ENSTTRG00000006168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000006168's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000006168	SMARCA1	58	37.153	ENSTTRG00000011711	CHD1L	64	37.153

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000006168	SMARCA1	100	95.354	ENSG00000102038	SMARCA1	94	95.354	Homo_sapiens
ENSTTRG00000006168	SMARCA1	96	80.400	ENSAPOG00000016035	smarca5	96	80.820	Acanthochromis_polyacanthus
ENSTTRG00000006168	SMARCA1	99	94.710	ENSAMEG00000015218	SMARCA1	92	94.710	Ailuropoda_melanoleuca
ENSTTRG00000006168	SMARCA1	88	80.822	ENSACIG00000016982	smarca5	97	80.882	Amphilophus_citrinellus
ENSTTRG00000006168	SMARCA1	96	80.400	ENSAOCG00000015578	smarca5	92	80.498	Amphiprion_ocellaris
ENSTTRG00000006168	SMARCA1	96	80.400	ENSAPEG00000011117	smarca5	97	80.622	Amphiprion_percula
ENSTTRG00000006168	SMARCA1	99	78.760	ENSATEG00000012894	smarca5	93	79.917	Anabas_testudineus
ENSTTRG00000006168	SMARCA1	96	89.286	ENSAPLG00000013149	SMARCA1	97	89.038	Anas_platyrhynchos
ENSTTRG00000006168	SMARCA1	99	87.984	ENSACAG00000011376	SMARCA1	92	87.984	Anolis_carolinensis
ENSTTRG00000006168	SMARCA1	99	89.725	ENSANAG00000023098	SMARCA1	92	89.725	Aotus_nancymaae
ENSTTRG00000006168	SMARCA1	96	80.652	ENSACLG00000025356	smarca5	93	79.877	Astatotilapia_calliptera
ENSTTRG00000006168	SMARCA1	99	78.128	ENSAMXG00000005709	smarca5	93	79.755	Astyanax_mexicanus
ENSTTRG00000006168	SMARCA1	94	84.409	ENSAMXG00000011227	smarca1	99	84.834	Astyanax_mexicanus
ENSTTRG00000006168	SMARCA1	99	95.833	ENSBTAG00000002292	SMARCA1	94	95.833	Bos_taurus
ENSTTRG00000006168	SMARCA1	98	60.776	WBGene00002169	isw-1	95	60.776	Caenorhabditis_elegans
ENSTTRG00000006168	SMARCA1	99	95.015	ENSCJAG00000002868	SMARCA1	92	95.015	Callithrix_jacchus
ENSTTRG00000006168	SMARCA1	99	85.642	ENSCAFG00000018673	SMARCA1	97	84.267	Canis_familiaris
ENSTTRG00000006168	SMARCA1	99	94.710	ENSCAFG00020001751	SMARCA1	92	94.710	Canis_lupus_dingo
ENSTTRG00000006168	SMARCA1	100	95.960	ENSCHIG00000009837	SMARCA1	94	95.960	Capra_hircus
ENSTTRG00000006168	SMARCA1	99	95.015	ENSTSYG00000004240	SMARCA1	98	93.360	Carlito_syrichta
ENSTTRG00000006168	SMARCA1	100	94.242	ENSCPOG00000013601	SMARCA1	95	94.242	Cavia_porcellus
ENSTTRG00000006168	SMARCA1	99	91.760	ENSCCAG00000030817	SMARCA1	92	91.760	Cebus_capucinus
ENSTTRG00000006168	SMARCA1	99	95.320	ENSCATG00000015921	SMARCA1	94	94.242	Cercocebus_atys
ENSTTRG00000006168	SMARCA1	100	94.343	ENSCLAG00000002171	SMARCA1	94	94.343	Chinchilla_lanigera
ENSTTRG00000006168	SMARCA1	99	94.201	ENSCSAG00000008460	SMARCA1	92	94.201	Chlorocebus_sabaeus
ENSTTRG00000006168	SMARCA1	99	88.595	ENSCPBG00000001146	SMARCA1	91	90.704	Chrysemys_picta_bellii
ENSTTRG00000006168	SMARCA1	96	70.282	ENSCING00000004110	swi/snf	94	71.011	Ciona_intestinalis
ENSTTRG00000006168	SMARCA1	97	69.565	ENSCSAVG00000004620	-	100	70.110	Ciona_savignyi
ENSTTRG00000006168	SMARCA1	99	95.219	ENSCANG00000007183	SMARCA1	92	95.219	Colobus_angolensis_palliatus
ENSTTRG00000006168	SMARCA1	100	93.434	ENSCGRG00001010776	Smarca1	94	93.434	Cricetulus_griseus_chok1gshd
ENSTTRG00000006168	SMARCA1	100	93.232	ENSCGRG00000015301	Smarca1	98	93.232	Cricetulus_griseus_crigri
ENSTTRG00000006168	SMARCA1	98	79.938	ENSCSEG00000000328	smarca5	93	79.448	Cynoglossus_semilaevis
ENSTTRG00000006168	SMARCA1	96	80.231	ENSCVAG00000008668	smarca5	97	80.048	Cyprinodon_variegatus
ENSTTRG00000006168	SMARCA1	97	82.811	ENSDARG00000012776	smarca1	94	82.912	Danio_rerio
ENSTTRG00000006168	SMARCA1	96	80.380	ENSDARG00000052348	smarca5	92	80.374	Danio_rerio
ENSTTRG00000006168	SMARCA1	99	92.480	ENSDNOG00000004315	SMARCA1	94	92.581	Dasypus_novemcinctus
ENSTTRG00000006168	SMARCA1	100	92.727	ENSDORG00000009270	Smarca1	94	92.727	Dipodomys_ordii
ENSTTRG00000006168	SMARCA1	97	70.041	FBgn0011604	Iswi	94	69.789	Drosophila_melanogaster
ENSTTRG00000006168	SMARCA1	84	91.071	ENSETEG00000017426	SMARCA1	86	91.071	Echinops_telfairi
ENSTTRG00000006168	SMARCA1	95	78.496	ENSEBUG00000001239	smarca5	95	78.006	Eptatretus_burgeri
ENSTTRG00000006168	SMARCA1	99	90.890	ENSEASG00005008218	SMARCA1	96	90.993	Equus_asinus_asinus
ENSTTRG00000006168	SMARCA1	99	94.608	ENSECAG00000012106	SMARCA1	91	94.608	Equus_caballus
ENSTTRG00000006168	SMARCA1	82	93.046	ENSEEUG00000014927	SMARCA1	84	93.046	Erinaceus_europaeus
ENSTTRG00000006168	SMARCA1	96	84.293	ENSELUG00000010515	smarca1	94	84.070	Esox_lucius
ENSTTRG00000006168	SMARCA1	99	96.033	ENSFCAG00000018496	SMARCA1	92	96.033	Felis_catus
ENSTTRG00000006168	SMARCA1	93	88.649	ENSFALG00000000209	SMARCA1	98	88.745	Ficedula_albicollis
ENSTTRG00000006168	SMARCA1	100	94.949	ENSFDAG00000009818	SMARCA1	97	94.949	Fukomys_damarensis
ENSTTRG00000006168	SMARCA1	96	80.336	ENSFHEG00000007687	smarca5	91	80.854	Fundulus_heteroclitus
ENSTTRG00000006168	SMARCA1	98	88.716	ENSGALG00000008431	SMARCA1	96	88.313	Gallus_gallus
ENSTTRG00000006168	SMARCA1	96	80.336	ENSGAFG00000017731	smarca5	93	79.571	Gambusia_affinis
ENSTTRG00000006168	SMARCA1	97	89.062	ENSGAGG00000023575	SMARCA1	98	89.062	Gopherus_agassizii
ENSTTRG00000006168	SMARCA1	75	96.000	ENSGGOG00000012841	-	94	96.000	Gorilla_gorilla
ENSTTRG00000006168	SMARCA1	100	94.141	ENSHGLG00000003080	SMARCA1	94	94.141	Heterocephalus_glaber_female
ENSTTRG00000006168	SMARCA1	99	93.921	ENSHGLG00100001102	SMARCA1	98	93.921	Heterocephalus_glaber_male
ENSTTRG00000006168	SMARCA1	96	80.231	ENSHCOG00000005458	smarca5	93	79.469	Hippocampus_comes
ENSTTRG00000006168	SMARCA1	98	83.901	ENSIPUG00000016905	Smarca1	97	84.004	Ictalurus_punctatus
ENSTTRG00000006168	SMARCA1	97	79.418	ENSIPUG00000005229	SMARCA5	95	79.324	Ictalurus_punctatus
ENSTTRG00000006168	SMARCA1	100	94.646	ENSSTOG00000014524	SMARCA1	94	94.646	Ictidomys_tridecemlineatus
ENSTTRG00000006168	SMARCA1	100	92.525	ENSJJAG00000002593	Smarca1	94	92.525	Jaculus_jaculus
ENSTTRG00000006168	SMARCA1	96	80.757	ENSKMAG00000003777	smarca5	93	79.980	Kryptolebias_marmoratus
ENSTTRG00000006168	SMARCA1	97	79.024	ENSLBEG00000018112	smarca5	93	79.141	Labrus_bergylta
ENSTTRG00000006168	SMARCA1	95	78.367	ENSLBEG00000013295	SMARCA1	100	79.701	Labrus_bergylta
ENSTTRG00000006168	SMARCA1	99	85.990	ENSLACG00000016697	SMARCA1	96	86.091	Latimeria_chalumnae
ENSTTRG00000006168	SMARCA1	96	86.450	ENSLOCG00000014591	smarca1	93	86.453	Lepisosteus_oculatus
ENSTTRG00000006168	SMARCA1	100	91.675	ENSLAFG00000000896	SMARCA1	99	91.775	Loxodonta_africana
ENSTTRG00000006168	SMARCA1	99	95.320	ENSMFAG00000002117	SMARCA1	97	94.052	Macaca_fascicularis
ENSTTRG00000006168	SMARCA1	99	95.320	ENSMMUG00000008818	SMARCA1	99	93.320	Macaca_mulatta
ENSTTRG00000006168	SMARCA1	99	95.320	ENSMNEG00000041768	SMARCA1	97	94.052	Macaca_nemestrina
ENSTTRG00000006168	SMARCA1	99	95.219	ENSMLEG00000043198	SMARCA1	92	95.219	Mandrillus_leucophaeus
ENSTTRG00000006168	SMARCA1	96	80.652	ENSMAMG00000014294	smarca5	93	79.796	Mastacembelus_armatus
ENSTTRG00000006168	SMARCA1	96	80.652	ENSMZEG00005009369	smarca5	93	79.877	Maylandia_zebra
ENSTTRG00000006168	SMARCA1	98	88.820	ENSMGAG00000007042	SMARCA1	97	88.583	Meleagris_gallopavo
ENSTTRG00000006168	SMARCA1	100	94.040	ENSMAUG00000008133	Smarca1	94	94.040	Mesocricetus_auratus
ENSTTRG00000006168	SMARCA1	99	95.320	ENSMICG00000015768	SMARCA1	92	95.320	Microcebus_murinus
ENSTTRG00000006168	SMARCA1	100	93.636	ENSMOCG00000009464	Smarca1	94	93.636	Microtus_ochrogaster
ENSTTRG00000006168	SMARCA1	97	77.075	ENSMMOG00000005547	smarca5	97	77.835	Mola_mola
ENSTTRG00000006168	SMARCA1	98	87.951	ENSMODG00000013187	-	94	87.310	Monodelphis_domestica
ENSTTRG00000006168	SMARCA1	98	79.222	ENSMALG00000002081	smarca5	98	78.528	Monopterus_albus
ENSTTRG00000006168	SMARCA1	100	92.462	MGP_CAROLIEiJ_G0033034	Smarca1	94	92.462	Mus_caroli
ENSTTRG00000006168	SMARCA1	100	92.563	ENSMUSG00000031099	Smarca1	94	92.563	Mus_musculus
ENSTTRG00000006168	SMARCA1	100	92.362	MGP_PahariEiJ_G0031579	Smarca1	94	92.362	Mus_pahari
ENSTTRG00000006168	SMARCA1	100	92.563	MGP_SPRETEiJ_G0034192	Smarca1	94	92.563	Mus_spretus
ENSTTRG00000006168	SMARCA1	99	95.829	ENSMPUG00000017423	SMARCA1	87	95.829	Mustela_putorius_furo
ENSTTRG00000006168	SMARCA1	99	92.690	ENSMLUG00000029614	SMARCA1	92	92.284	Myotis_lucifugus
ENSTTRG00000006168	SMARCA1	100	94.848	ENSNGAG00000006492	Smarca1	94	94.848	Nannospalax_galili
ENSTTRG00000006168	SMARCA1	96	80.757	ENSNBRG00000004463	smarca5	97	79.980	Neolamprologus_brichardi
ENSTTRG00000006168	SMARCA1	99	94.507	ENSNLEG00000015179	SMARCA1	98	93.152	Nomascus_leucogenys
ENSTTRG00000006168	SMARCA1	96	78.541	ENSMEUG00000008819	SMARCA1	99	78.541	Notamacropus_eugenii
ENSTTRG00000006168	SMARCA1	100	94.040	ENSODEG00000012163	SMARCA1	94	94.040	Octodon_degus
ENSTTRG00000006168	SMARCA1	96	80.757	ENSONIG00000009993	smarca5	93	79.980	Oreochromis_niloticus
ENSTTRG00000006168	SMARCA1	97	89.490	ENSOANG00000002862	SMARCA1	98	89.490	Ornithorhynchus_anatinus
ENSTTRG00000006168	SMARCA1	99	92.777	ENSOCUG00000001047	SMARCA1	92	92.777	Oryctolagus_cuniculus
ENSTTRG00000006168	SMARCA1	96	80.231	ENSORLG00000021998	smarca5	93	79.775	Oryzias_latipes
ENSTTRG00000006168	SMARCA1	96	80.336	ENSORLG00020017679	smarca5	93	79.877	Oryzias_latipes_hni
ENSTTRG00000006168	SMARCA1	96	80.231	ENSORLG00015017210	smarca5	93	79.469	Oryzias_latipes_hsok
ENSTTRG00000006168	SMARCA1	96	80.231	ENSOMEG00000000086	smarca5	93	79.469	Oryzias_melastigma
ENSTTRG00000006168	SMARCA1	100	95.051	ENSOGAG00000004399	SMARCA1	94	95.051	Otolemur_garnettii
ENSTTRG00000006168	SMARCA1	99	94.614	ENSOARG00000014638	SMARCA1	98	94.943	Ovis_aries
ENSTTRG00000006168	SMARCA1	99	95.320	ENSPPAG00000034647	SMARCA1	92	95.320	Pan_paniscus
ENSTTRG00000006168	SMARCA1	99	96.033	ENSPPRG00000008929	SMARCA1	92	96.033	Panthera_pardus
ENSTTRG00000006168	SMARCA1	99	94.034	ENSPTIG00000000915	SMARCA1	95	94.034	Panthera_tigris_altaica
ENSTTRG00000006168	SMARCA1	99	95.320	ENSPTRG00000049876	SMARCA1	94	94.242	Pan_troglodytes
ENSTTRG00000006168	SMARCA1	99	95.320	ENSPANG00000003871	SMARCA1	92	95.320	Papio_anubis
ENSTTRG00000006168	SMARCA1	99	82.383	ENSPKIG00000013411	smarca1	98	82.485	Paramormyrops_kingsleyae
ENSTTRG00000006168	SMARCA1	99	89.002	ENSPSIG00000010101	SMARCA1	98	88.958	Pelodiscus_sinensis
ENSTTRG00000006168	SMARCA1	100	94.646	ENSPEMG00000017503	Smarca1	94	94.646	Peromyscus_maniculatus_bairdii
ENSTTRG00000006168	SMARCA1	99	87.830	ENSPCIG00000015460	SMARCA1	97	87.830	Phascolarctos_cinereus
ENSTTRG00000006168	SMARCA1	96	80.442	ENSPFOG00000007649	smarca5	93	79.673	Poecilia_formosa
ENSTTRG00000006168	SMARCA1	96	80.442	ENSPLAG00000003363	smarca5	93	79.673	Poecilia_latipinna
ENSTTRG00000006168	SMARCA1	96	80.336	ENSPMEG00000019849	smarca5	94	79.289	Poecilia_mexicana
ENSTTRG00000006168	SMARCA1	96	80.336	ENSPREG00000023250	smarca5	94	79.289	Poecilia_reticulata
ENSTTRG00000006168	SMARCA1	99	91.862	ENSPPYG00000020703	SMARCA1	92	91.862	Pongo_abelii
ENSTTRG00000006168	SMARCA1	83	90.909	ENSPCOG00000020722	SMARCA1	94	87.590	Propithecus_coquereli
ENSTTRG00000006168	SMARCA1	94	95.890	ENSPVAG00000003805	SMARCA1	88	95.890	Pteropus_vampyrus
ENSTTRG00000006168	SMARCA1	60	80.886	ENSPNYG00000012299	smarca5	93	78.610	Pundamilia_nyererei
ENSTTRG00000006168	SMARCA1	99	92.675	ENSRNOG00000003762	Smarca1	92	92.675	Rattus_norvegicus
ENSTTRG00000006168	SMARCA1	99	95.219	ENSRROG00000034167	SMARCA1	92	95.219	Rhinopithecus_roxellana
ENSTTRG00000006168	SMARCA1	99	95.117	ENSSBOG00000020641	SMARCA1	98	94.324	Saimiri_boliviensis_boliviensis
ENSTTRG00000006168	SMARCA1	97	82.573	ENSSHAG00000013518	SMARCA1	97	82.676	Sarcophilus_harrisii
ENSTTRG00000006168	SMARCA1	96	80.526	ENSSFOG00015016794	smarca5	98	80.396	Scleropages_formosus
ENSTTRG00000006168	SMARCA1	97	85.254	ENSSFOG00015009043	smarca1	95	85.117	Scleropages_formosus
ENSTTRG00000006168	SMARCA1	97	79.084	ENSSMAG00000004801	smarca5	93	79.201	Scophthalmus_maximus
ENSTTRG00000006168	SMARCA1	96	80.126	ENSSDUG00000020690	smarca5	94	79.469	Seriola_dumerili
ENSTTRG00000006168	SMARCA1	96	80.126	ENSSLDG00000025190	smarca5	94	79.469	Seriola_lalandi_dorsalis
ENSTTRG00000006168	SMARCA1	91	88.991	ENSSARG00000000842	SMARCA1	91	88.991	Sorex_araneus
ENSTTRG00000006168	SMARCA1	100	87.475	ENSSPUG00000000590	SMARCA1	95	87.475	Sphenodon_punctatus
ENSTTRG00000006168	SMARCA1	96	80.400	ENSSPAG00000002894	smarca5	94	80.710	Stegastes_partitus
ENSTTRG00000006168	SMARCA1	99	94.614	ENSSSCG00000012649	SMARCA1	93	94.614	Sus_scrofa
ENSTTRG00000006168	SMARCA1	96	88.971	ENSTGUG00000003899	-	97	88.728	Taeniopygia_guttata
ENSTTRG00000006168	SMARCA1	96	79.557	ENSTRUG00000014094	smarca5	93	79.162	Takifugu_rubripes
ENSTTRG00000006168	SMARCA1	96	79.347	ENSTNIG00000017717	smarca5	92	78.447	Tetraodon_nigroviridis
ENSTTRG00000006168	SMARCA1	100	88.182	ENSTBEG00000014973	SMARCA1	99	88.182	Tupaia_belangeri
ENSTTRG00000006168	SMARCA1	99	94.303	ENSUAMG00000020201	SMARCA1	92	94.303	Ursus_americanus
ENSTTRG00000006168	SMARCA1	99	91.327	ENSUMAG00000004073	SMARCA1	96	95.086	Ursus_maritimus
ENSTTRG00000006168	SMARCA1	84	98.095	ENSVPAG00000010492	-	86	98.095	Vicugna_pacos
ENSTTRG00000006168	SMARCA1	99	94.608	ENSVVUG00000008878	SMARCA1	100	94.639	Vulpes_vulpes
ENSTTRG00000006168	SMARCA1	98	86.143	ENSXETG00000001526	smarca1	97	86.035	Xenopus_tropicalis
ENSTTRG00000006168	SMARCA1	96	80.231	ENSXCOG00000011170	smarca5	96	79.469	Xiphophorus_couchianus
ENSTTRG00000006168	SMARCA1	96	80.231	ENSXMAG00000009678	smarca5	98	80.108	Xiphophorus_maculatus