EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000006262 (Gene tree)
Gene ID: -
Gene Symbol: SNAI3
Alias: -
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 5518 bases
Position: chrGeneScaffold_2153:123354-128871
Accession: 18411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000005920	zf-C2H2	PF00096.26	1.1e-22	1	3
ENSTTRP00000005920	zf-C2H2	PF00096.26	1.1e-22	2	3
ENSTTRP00000005920	zf-C2H2	PF00096.26	1.1e-22	3	3
ENSTTRP00000005920	zf-met	PF12874.7	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000006257	SNAI3-201	852	-	ENSTTRP00000005920	283 (aa)	-	UPI00018B6501

Gene Model

Click here to download ENSTTRG00000006262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000006262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000006262	SNAI3	98	42.500	ENSTTRG00000003482	-	95	43.269
ENSTTRG00000006262	SNAI3	88	34.043	ENSTTRG00000008110	-	50	34.921
ENSTTRG00000006262	SNAI3	63	38.621	ENSTTRG00000002210	ZNF317	66	39.286
ENSTTRG00000006262	SNAI3	72	41.333	ENSTTRG00000004891	-	68	41.333
ENSTTRG00000006262	SNAI3	88	37.931	ENSTTRG00000000768	-	84	41.346
ENSTTRG00000006262	SNAI3	50	41.346	ENSTTRG00000006707	ZNF235	63	41.346
ENSTTRG00000006262	SNAI3	50	43.421	ENSTTRG00000008426	ZNF319	63	36.697
ENSTTRG00000006262	SNAI3	63	41.509	ENSTTRG00000004537	ZNF699	75	41.509
ENSTTRG00000006262	SNAI3	52	41.333	ENSTTRG00000015632	-	71	41.333
ENSTTRG00000006262	SNAI3	51	38.211	ENSTTRG00000003670	ZNF226	70	38.211
ENSTTRG00000006262	SNAI3	51	37.209	ENSTTRG00000004968	ZNF2	61	36.567

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000006262	SNAI3	99	45.804	ENSG00000019549	SNAI2	99	44.898	Homo_sapiens
ENSTTRG00000006262	SNAI3	99	72.509	ENSG00000185669	SNAI3	99	72.509	Homo_sapiens
ENSTTRG00000006262	SNAI3	99	71.478	ENSANAG00000032748	SNAI3	99	71.478	Aotus_nancymaae
ENSTTRG00000006262	SNAI3	99	46.503	ENSANAG00000021163	SNAI2	99	46.316	Aotus_nancymaae
ENSTTRG00000006262	SNAI3	99	47.059	ENSBTAG00000013227	SNAI2	99	46.875	Bos_taurus
ENSTTRG00000006262	SNAI3	100	84.880	ENSBTAG00000017528	SNAI3	100	84.880	Bos_taurus
ENSTTRG00000006262	SNAI3	99	45.804	ENSCJAG00000013499	SNAI2	99	44.898	Callithrix_jacchus
ENSTTRG00000006262	SNAI3	99	72.852	ENSCAFG00000029458	SNAI3	99	72.852	Canis_familiaris
ENSTTRG00000006262	SNAI3	99	72.509	ENSCAFG00020004719	SNAI3	99	72.509	Canis_lupus_dingo
ENSTTRG00000006262	SNAI3	100	85.911	ENSCHIG00000018087	SNAI3	100	85.911	Capra_hircus
ENSTTRG00000006262	SNAI3	99	47.059	ENSCHIG00000024410	SNAI2	99	46.875	Capra_hircus
ENSTTRG00000006262	SNAI3	90	69.811	ENSTSYG00000025594	SNAI3	90	69.811	Carlito_syrichta
ENSTTRG00000006262	SNAI3	99	45.804	ENSCCAG00000024100	SNAI2	99	44.898	Cebus_capucinus
ENSTTRG00000006262	SNAI3	99	45.804	ENSCATG00000028656	SNAI2	99	44.898	Cercocebus_atys
ENSTTRG00000006262	SNAI3	99	72.509	ENSCATG00000031714	SNAI3	99	72.509	Cercocebus_atys
ENSTTRG00000006262	SNAI3	99	45.804	ENSCSAG00000014787	SNAI2	99	44.898	Chlorocebus_sabaeus
ENSTTRG00000006262	SNAI3	90	71.429	ENSCSAG00000003047	SNAI3	90	71.429	Chlorocebus_sabaeus
ENSTTRG00000006262	SNAI3	99	59.933	ENSCPBG00000023474	SNAI3	99	59.933	Chrysemys_picta_bellii
ENSTTRG00000006262	SNAI3	59	53.254	ENSCSAVG00000009819	-	77	58.784	Ciona_savignyi
ENSTTRG00000006262	SNAI3	92	71.481	ENSCANG00000031124	SNAI3	82	71.481	Colobus_angolensis_palliatus
ENSTTRG00000006262	SNAI3	99	45.804	ENSCANG00000029656	SNAI2	99	44.898	Colobus_angolensis_palliatus
ENSTTRG00000006262	SNAI3	99	63.605	ENSCGRG00001011389	Snai3	99	64.626	Cricetulus_griseus_chok1gshd
ENSTTRG00000006262	SNAI3	99	63.605	ENSCGRG00000014932	Snai3	99	64.626	Cricetulus_griseus_crigri
ENSTTRG00000006262	SNAI3	80	51.282	ENSDNOG00000035204	-	100	51.709	Dasypus_novemcinctus
ENSTTRG00000006262	SNAI3	90	74.060	ENSEASG00005000614	SNAI3	87	74.060	Equus_asinus_asinus
ENSTTRG00000006262	SNAI3	99	75.258	ENSECAG00000012131	SNAI3	99	75.258	Equus_caballus
ENSTTRG00000006262	SNAI3	99	64.789	ENSEEUG00000000841	SNAI3	99	64.789	Erinaceus_europaeus
ENSTTRG00000006262	SNAI3	99	47.333	ENSELUG00000018742	-	99	46.026	Esox_lucius
ENSTTRG00000006262	SNAI3	99	73.665	ENSFCAG00000043885	SNAI3	99	73.665	Felis_catus
ENSTTRG00000006262	SNAI3	99	59.797	ENSGAGG00000023571	SNAI3	99	59.797	Gopherus_agassizii
ENSTTRG00000006262	SNAI3	99	72.509	ENSGGOG00000012559	SNAI3	99	72.509	Gorilla_gorilla
ENSTTRG00000006262	SNAI3	99	45.804	ENSGGOG00000000959	SNAI2	99	44.898	Gorilla_gorilla
ENSTTRG00000006262	SNAI3	99	46.831	ENSIPUG00000000131	snai2	99	46.831	Ictalurus_punctatus
ENSTTRG00000006262	SNAI3	99	67.808	ENSJJAG00000019934	Snai3	99	67.808	Jaculus_jaculus
ENSTTRG00000006262	SNAI3	99	44.983	ENSLOCG00000005992	SNAI2	99	44.983	Lepisosteus_oculatus
ENSTTRG00000006262	SNAI3	99	69.759	ENSLAFG00000005117	SNAI3	99	69.759	Loxodonta_africana
ENSTTRG00000006262	SNAI3	99	73.540	ENSMFAG00000032064	SNAI3	99	73.540	Macaca_fascicularis
ENSTTRG00000006262	SNAI3	99	45.804	ENSMFAG00000046061	SNAI2	99	44.898	Macaca_fascicularis
ENSTTRG00000006262	SNAI3	99	73.540	ENSMMUG00000008716	SNAI3	99	73.540	Macaca_mulatta
ENSTTRG00000006262	SNAI3	99	45.804	ENSMMUG00000016195	SNAI2	99	44.898	Macaca_mulatta
ENSTTRG00000006262	SNAI3	99	45.804	ENSMNEG00000034216	SNAI2	99	44.898	Macaca_nemestrina
ENSTTRG00000006262	SNAI3	99	73.196	ENSMNEG00000045515	SNAI3	99	73.196	Macaca_nemestrina
ENSTTRG00000006262	SNAI3	99	45.804	ENSMLEG00000034407	SNAI2	99	44.898	Mandrillus_leucophaeus
ENSTTRG00000006262	SNAI3	90	71.805	ENSMLEG00000033191	SNAI3	90	71.805	Mandrillus_leucophaeus
ENSTTRG00000006262	SNAI3	99	64.626	ENSMAUG00000001685	Snai3	99	64.626	Mesocricetus_auratus
ENSTTRG00000006262	SNAI3	99	66.327	ENSMOCG00000003536	Snai3	99	66.327	Microtus_ochrogaster
ENSTTRG00000006262	SNAI3	99	47.059	ENSMODG00000010173	SNAI2	99	45.455	Monodelphis_domestica
ENSTTRG00000006262	SNAI3	99	63.605	MGP_CAROLIEiJ_G0031662	Snai3	99	63.605	Mus_caroli
ENSTTRG00000006262	SNAI3	99	46.102	MGP_CAROLIEiJ_G0020483	Snai2	99	46.367	Mus_caroli
ENSTTRG00000006262	SNAI3	99	63.946	ENSMUSG00000006587	Snai3	99	63.946	Mus_musculus
ENSTTRG00000006262	SNAI3	99	47.203	ENSMUSG00000022676	Snai2	99	46.367	Mus_musculus
ENSTTRG00000006262	SNAI3	99	64.605	MGP_PahariEiJ_G0023260	Snai3	99	64.605	Mus_pahari
ENSTTRG00000006262	SNAI3	99	46.102	MGP_PahariEiJ_G0016188	Snai2	99	46.367	Mus_pahari
ENSTTRG00000006262	SNAI3	99	63.946	MGP_SPRETEiJ_G0032780	Snai3	99	63.946	Mus_spretus
ENSTTRG00000006262	SNAI3	99	46.102	MGP_SPRETEiJ_G0021379	Snai2	99	46.367	Mus_spretus
ENSTTRG00000006262	SNAI3	99	67.014	ENSMPUG00000008104	SNAI3	99	67.014	Mustela_putorius_furo
ENSTTRG00000006262	SNAI3	99	68.385	ENSNGAG00000023039	Snai3	99	68.385	Nannospalax_galili
ENSTTRG00000006262	SNAI3	99	45.424	ENSNLEG00000013421	SNAI2	99	45.238	Nomascus_leucogenys
ENSTTRG00000006262	SNAI3	99	73.196	ENSNLEG00000000595	SNAI3	99	73.196	Nomascus_leucogenys
ENSTTRG00000006262	SNAI3	98	45.936	ENSMEUG00000009510	SNAI2	100	44.286	Notamacropus_eugenii
ENSTTRG00000006262	SNAI3	99	68.729	ENSOGAG00000000419	SNAI3	99	69.759	Otolemur_garnettii
ENSTTRG00000006262	SNAI3	91	65.530	ENSOARG00000013069	-	100	65.530	Ovis_aries
ENSTTRG00000006262	SNAI3	99	47.059	ENSOARG00000013030	SNAI2	99	46.875	Ovis_aries
ENSTTRG00000006262	SNAI3	99	45.804	ENSPPAG00000015662	SNAI2	99	44.898	Pan_paniscus
ENSTTRG00000006262	SNAI3	99	72.852	ENSPPAG00000043301	SNAI3	99	72.852	Pan_paniscus
ENSTTRG00000006262	SNAI3	99	72.954	ENSPPRG00000008511	SNAI3	99	72.954	Panthera_pardus
ENSTTRG00000006262	SNAI3	99	71.821	ENSPTRG00000008460	SNAI3	99	71.821	Pan_troglodytes
ENSTTRG00000006262	SNAI3	99	45.804	ENSPTRG00000020235	SNAI2	99	44.898	Pan_troglodytes
ENSTTRG00000006262	SNAI3	99	45.804	ENSPANG00000017540	SNAI2	99	44.898	Papio_anubis
ENSTTRG00000006262	SNAI3	99	73.196	ENSPANG00000000509	SNAI3	99	73.196	Papio_anubis
ENSTTRG00000006262	SNAI3	99	46.926	ENSPKIG00000007872	SNAI3	99	47.249	Paramormyrops_kingsleyae
ENSTTRG00000006262	SNAI3	99	45.804	ENSPKIG00000002254	SNAI2	99	46.503	Paramormyrops_kingsleyae
ENSTTRG00000006262	SNAI3	76	57.826	ENSPSIG00000004262	SNAI3	90	57.826	Pelodiscus_sinensis
ENSTTRG00000006262	SNAI3	99	46.528	ENSPCIG00000025156	SNAI2	99	44.912	Phascolarctos_cinereus
ENSTTRG00000006262	SNAI3	99	73.883	ENSPPYG00000007643	SNAI3	99	73.883	Pongo_abelii
ENSTTRG00000006262	SNAI3	99	45.804	ENSPPYG00000018578	SNAI2	99	44.898	Pongo_abelii
ENSTTRG00000006262	SNAI3	99	63.946	ENSRNOG00000013586	Snai3	99	63.946	Rattus_norvegicus
ENSTTRG00000006262	SNAI3	99	45.804	ENSRBIG00000041133	SNAI2	99	44.898	Rhinopithecus_bieti
ENSTTRG00000006262	SNAI3	99	72.852	ENSRBIG00000025770	SNAI3	99	72.852	Rhinopithecus_bieti
ENSTTRG00000006262	SNAI3	99	72.852	ENSRROG00000032757	SNAI3	99	72.852	Rhinopithecus_roxellana
ENSTTRG00000006262	SNAI3	99	45.804	ENSRROG00000032273	SNAI2	99	44.898	Rhinopithecus_roxellana
ENSTTRG00000006262	SNAI3	99	45.804	ENSSBOG00000035774	SNAI2	99	44.898	Saimiri_boliviensis_boliviensis
ENSTTRG00000006262	SNAI3	99	46.528	ENSSHAG00000004205	SNAI2	99	44.912	Sarcophilus_harrisii
ENSTTRG00000006262	SNAI3	99	46.690	ENSSFOG00015018025	SNAI2	99	46.552	Scleropages_formosus
ENSTTRG00000006262	SNAI3	99	46.026	ENSSFOG00015016115	snai3	93	45.215	Scleropages_formosus
ENSTTRG00000006262	SNAI3	99	73.540	ENSUAMG00000020030	SNAI3	99	73.540	Ursus_americanus
ENSTTRG00000006262	SNAI3	99	72.509	ENSVVUG00000003233	SNAI3	99	72.509	Vulpes_vulpes