EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000006344 (Gene tree)
Gene ID: -
Gene Symbol: POLR1C
Alias: RPA39|RPA40|RPA5|RPAC1
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 7639 bases
Position: chrGeneScaffold_1812:208392-216030
Accession: 20194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000006004	RNA_pol_A_bac	PF01000.26	6.9e-31	1	1
ENSTTRP00000006004	RNA_pol_L	PF01193.24	3.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000006345	POLR1C-201	1029	-	ENSTTRP00000006004	343 (aa)	-	UPI00018B7922

Gene Model

Click here to download ENSTTRG00000006344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000006344's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000006344	POLR1C	76	95.057	ENSG00000171453	POLR1C	90	95.057	Homo_sapiens
ENSTTRG00000006344	POLR1C	76	71.161	ENSAPOG00000024356	polr1c	76	71.536	Acanthochromis_polyacanthus
ENSTTRG00000006344	POLR1C	76	94.297	ENSAMEG00000012205	POLR1C	76	94.297	Ailuropoda_melanoleuca
ENSTTRG00000006344	POLR1C	73	69.112	ENSACIG00000016268	polr1c	79	69.884	Amphilophus_citrinellus
ENSTTRG00000006344	POLR1C	76	69.663	ENSAOCG00000011687	polr1c	74	70.037	Amphiprion_ocellaris
ENSTTRG00000006344	POLR1C	76	69.663	ENSAPEG00000002433	polr1c	76	70.037	Amphiprion_percula
ENSTTRG00000006344	POLR1C	75	71.698	ENSATEG00000005985	polr1c	75	71.698	Anabas_testudineus
ENSTTRG00000006344	POLR1C	76	82.510	ENSAPLG00000002908	POLR1C	88	82.510	Anas_platyrhynchos
ENSTTRG00000006344	POLR1C	64	76.786	ENSACAG00000009764	POLR1C	64	76.786	Anolis_carolinensis
ENSTTRG00000006344	POLR1C	76	93.916	ENSANAG00000025805	POLR1C	75	93.916	Aotus_nancymaae
ENSTTRG00000006344	POLR1C	50	31.667	ENSACLG00000004854	polr2c	72	31.667	Astatotilapia_calliptera
ENSTTRG00000006344	POLR1C	76	69.288	ENSACLG00000006573	polr1c	76	70.037	Astatotilapia_calliptera
ENSTTRG00000006344	POLR1C	76	70.342	ENSAMXG00000012062	polr1c	76	70.342	Astyanax_mexicanus
ENSTTRG00000006344	POLR1C	76	93.916	ENSBTAG00000018969	POLR1C	76	93.916	Bos_taurus
ENSTTRG00000006344	POLR1C	75	49.635	WBGene00019275	rpac-40	75	49.635	Caenorhabditis_elegans
ENSTTRG00000006344	POLR1C	76	93.916	ENSCJAG00000005594	POLR1C	76	93.916	Callithrix_jacchus
ENSTTRG00000006344	POLR1C	76	94.677	ENSCAFG00000001872	POLR1C	76	94.677	Canis_familiaris
ENSTTRG00000006344	POLR1C	76	94.677	ENSCAFG00020012018	POLR1C	76	94.677	Canis_lupus_dingo
ENSTTRG00000006344	POLR1C	76	93.939	ENSCHIG00000004352	POLR1C	76	93.939	Capra_hircus
ENSTTRG00000006344	POLR1C	76	94.677	ENSTSYG00000011921	POLR1C	76	94.677	Carlito_syrichta
ENSTTRG00000006344	POLR1C	76	92.776	ENSCAPG00000015364	POLR1C	77	92.776	Cavia_aperea
ENSTTRG00000006344	POLR1C	76	93.156	ENSCPOG00000038098	POLR1C	76	93.156	Cavia_porcellus
ENSTTRG00000006344	POLR1C	76	93.916	ENSCCAG00000020169	POLR1C	76	93.916	Cebus_capucinus
ENSTTRG00000006344	POLR1C	76	94.297	ENSCATG00000044045	POLR1C	76	94.297	Cercocebus_atys
ENSTTRG00000006344	POLR1C	76	93.156	ENSCLAG00000009266	POLR1C	76	93.156	Chinchilla_lanigera
ENSTTRG00000006344	POLR1C	76	93.156	ENSCSAG00000011913	POLR1C	76	93.156	Chlorocebus_sabaeus
ENSTTRG00000006344	POLR1C	61	92.453	ENSCHOG00000006601	POLR1C	100	92.453	Choloepus_hoffmanni
ENSTTRG00000006344	POLR1C	76	82.890	ENSCPBG00000025203	POLR1C	76	82.890	Chrysemys_picta_bellii
ENSTTRG00000006344	POLR1C	76	54.924	ENSCING00000003563	-	76	54.924	Ciona_intestinalis
ENSTTRG00000006344	POLR1C	76	94.297	ENSCANG00000043167	POLR1C	76	94.297	Colobus_angolensis_palliatus
ENSTTRG00000006344	POLR1C	76	91.255	ENSCGRG00001017533	Polr1c	76	91.255	Cricetulus_griseus_chok1gshd
ENSTTRG00000006344	POLR1C	76	91.255	ENSCGRG00000013225	Polr1c	88	91.255	Cricetulus_griseus_crigri
ENSTTRG00000006344	POLR1C	76	70.342	ENSCSEG00000018097	polr1c	76	70.342	Cynoglossus_semilaevis
ENSTTRG00000006344	POLR1C	61	68.868	ENSCVAG00000005684	polr1c	88	68.037	Cyprinodon_variegatus
ENSTTRG00000006344	POLR1C	76	69.962	ENSDARG00000039400	polr1c	73	69.962	Danio_rerio
ENSTTRG00000006344	POLR1C	76	94.297	ENSDNOG00000042693	POLR1C	76	94.297	Dasypus_novemcinctus
ENSTTRG00000006344	POLR1C	76	93.916	ENSDORG00000000429	Polr1c	76	93.916	Dipodomys_ordii
ENSTTRG00000006344	POLR1C	74	56.589	FBgn0031657	CG3756	77	56.589	Drosophila_melanogaster
ENSTTRG00000006344	POLR1C	76	88.593	ENSETEG00000010807	POLR1C	76	88.593	Echinops_telfairi
ENSTTRG00000006344	POLR1C	74	72.973	ENSEBUG00000013725	polr1c	80	72.973	Eptatretus_burgeri
ENSTTRG00000006344	POLR1C	76	94.297	ENSEASG00005003338	POLR1C	76	94.297	Equus_asinus_asinus
ENSTTRG00000006344	POLR1C	76	93.916	ENSECAG00000023516	POLR1C	75	93.916	Equus_caballus
ENSTTRG00000006344	POLR1C	76	93.916	ENSEEUG00000005471	POLR1C	76	93.916	Erinaceus_europaeus
ENSTTRG00000006344	POLR1C	76	71.483	ENSELUG00000013027	polr1c	76	71.483	Esox_lucius
ENSTTRG00000006344	POLR1C	76	94.677	ENSFCAG00000009735	POLR1C	76	94.677	Felis_catus
ENSTTRG00000006344	POLR1C	76	81.749	ENSFALG00000012111	POLR1C	81	81.749	Ficedula_albicollis
ENSTTRG00000006344	POLR1C	76	91.635	ENSFDAG00000008428	POLR1C	76	91.635	Fukomys_damarensis
ENSTTRG00000006344	POLR1C	76	56.757	ENSFHEG00000000262	polr1c	72	56.757	Fundulus_heteroclitus
ENSTTRG00000006344	POLR1C	76	68.939	ENSGMOG00000013878	polr1c	81	68.939	Gadus_morhua
ENSTTRG00000006344	POLR1C	76	82.510	ENSGALG00000010349	POLR1C	76	82.510	Gallus_gallus
ENSTTRG00000006344	POLR1C	76	68.539	ENSGAFG00000010153	polr1c	76	68.914	Gambusia_affinis
ENSTTRG00000006344	POLR1C	76	68.165	ENSGACG00000002453	polr1c	76	69.288	Gasterosteus_aculeatus
ENSTTRG00000006344	POLR1C	76	83.270	ENSGAGG00000010640	POLR1C	82	83.270	Gopherus_agassizii
ENSTTRG00000006344	POLR1C	76	95.057	ENSGGOG00000010903	POLR1C	76	95.057	Gorilla_gorilla
ENSTTRG00000006344	POLR1C	50	31.667	ENSHBUG00000023040	polr2c	72	31.667	Haplochromis_burtoni
ENSTTRG00000006344	POLR1C	76	71.103	ENSHBUG00000017816	polr1c	80	71.103	Haplochromis_burtoni
ENSTTRG00000006344	POLR1C	76	91.635	ENSHGLG00000019441	POLR1C	100	91.538	Heterocephalus_glaber_female
ENSTTRG00000006344	POLR1C	76	91.255	ENSHGLG00100005970	POLR1C	100	91.154	Heterocephalus_glaber_male
ENSTTRG00000006344	POLR1C	74	67.300	ENSHCOG00000002179	polr1c	75	67.300	Hippocampus_comes
ENSTTRG00000006344	POLR1C	75	70.881	ENSIPUG00000024464	polr1c	75	70.881	Ictalurus_punctatus
ENSTTRG00000006344	POLR1C	76	94.297	ENSSTOG00000010631	POLR1C	76	94.297	Ictidomys_tridecemlineatus
ENSTTRG00000006344	POLR1C	76	93.156	ENSJJAG00000023110	Polr1c	76	93.156	Jaculus_jaculus
ENSTTRG00000006344	POLR1C	76	68.165	ENSKMAG00000014305	polr1c	74	68.914	Kryptolebias_marmoratus
ENSTTRG00000006344	POLR1C	76	68.914	ENSLBEG00000014925	polr1c	76	69.663	Labrus_bergylta
ENSTTRG00000006344	POLR1C	76	67.557	ENSLACG00000012567	POLR1C	78	67.557	Latimeria_chalumnae
ENSTTRG00000006344	POLR1C	76	74.525	ENSLOCG00000016710	polr1c	72	74.525	Lepisosteus_oculatus
ENSTTRG00000006344	POLR1C	76	93.536	ENSLAFG00000026248	POLR1C	87	93.536	Loxodonta_africana
ENSTTRG00000006344	POLR1C	76	93.916	ENSMFAG00000046295	POLR1C	76	93.916	Macaca_fascicularis
ENSTTRG00000006344	POLR1C	76	93.916	ENSMMUG00000015192	POLR1C	76	93.916	Macaca_mulatta
ENSTTRG00000006344	POLR1C	76	93.916	ENSMNEG00000028073	POLR1C	76	93.916	Macaca_nemestrina
ENSTTRG00000006344	POLR1C	76	94.297	ENSMLEG00000034818	POLR1C	76	94.297	Mandrillus_leucophaeus
ENSTTRG00000006344	POLR1C	76	70.037	ENSMAMG00000008700	polr1c	76	70.037	Mastacembelus_armatus
ENSTTRG00000006344	POLR1C	76	68.914	ENSMZEG00005018545	polr1c	76	69.663	Maylandia_zebra
ENSTTRG00000006344	POLR1C	76	82.129	ENSMGAG00000011020	POLR1C	92	82.129	Meleagris_gallopavo
ENSTTRG00000006344	POLR1C	76	92.395	ENSMAUG00000014329	Polr1c	76	92.395	Mesocricetus_auratus
ENSTTRG00000006344	POLR1C	76	92.395	ENSMICG00000005027	POLR1C	76	92.395	Microcebus_murinus
ENSTTRG00000006344	POLR1C	76	92.015	ENSMOCG00000017549	Polr1c	76	92.015	Microtus_ochrogaster
ENSTTRG00000006344	POLR1C	75	55.426	ENSMMOG00000005380	polr1c	71	55.426	Mola_mola
ENSTTRG00000006344	POLR1C	76	86.692	ENSMODG00000018964	POLR1C	90	86.692	Monodelphis_domestica
ENSTTRG00000006344	POLR1C	76	58.687	ENSMALG00000011711	polr1c	72	58.687	Monopterus_albus
ENSTTRG00000006344	POLR1C	76	90.875	MGP_CAROLIEiJ_G0021662	Polr1c	100	90.769	Mus_caroli
ENSTTRG00000006344	POLR1C	76	91.255	ENSMUSG00000067148	Polr1c	100	91.154	Mus_musculus
ENSTTRG00000006344	POLR1C	76	90.114	MGP_PahariEiJ_G0020654	Polr1c	100	90.000	Mus_pahari
ENSTTRG00000006344	POLR1C	76	91.635	MGP_SPRETEiJ_G0022574	Polr1c	100	91.538	Mus_spretus
ENSTTRG00000006344	POLR1C	76	95.057	ENSMPUG00000012916	POLR1C	69	95.057	Mustela_putorius_furo
ENSTTRG00000006344	POLR1C	76	95.817	ENSMLUG00000017751	POLR1C	76	95.817	Myotis_lucifugus
ENSTTRG00000006344	POLR1C	76	90.875	ENSNGAG00000023487	Polr1c	90	90.875	Nannospalax_galili
ENSTTRG00000006344	POLR1C	76	69.663	ENSNBRG00000018742	polr1c	76	70.412	Neolamprologus_brichardi
ENSTTRG00000006344	POLR1C	76	95.057	ENSNLEG00000004035	POLR1C	76	95.057	Nomascus_leucogenys
ENSTTRG00000006344	POLR1C	76	72.624	ENSMEUG00000006778	POLR1C	76	72.624	Notamacropus_eugenii
ENSTTRG00000006344	POLR1C	52	92.222	ENSOPRG00000000145	POLR1C	67	92.222	Ochotona_princeps
ENSTTRG00000006344	POLR1C	63	89.498	ENSODEG00000017109	-	100	89.498	Octodon_degus
ENSTTRG00000006344	POLR1C	76	90.875	ENSODEG00000015831	-	76	90.875	Octodon_degus
ENSTTRG00000006344	POLR1C	76	69.663	ENSONIG00000013133	polr1c	75	70.412	Oreochromis_niloticus
ENSTTRG00000006344	POLR1C	76	83.270	ENSOANG00000003043	POLR1C	76	83.270	Ornithorhynchus_anatinus
ENSTTRG00000006344	POLR1C	76	93.536	ENSOCUG00000005504	POLR1C	76	93.536	Oryctolagus_cuniculus
ENSTTRG00000006344	POLR1C	74	67.954	ENSORLG00000019743	polr1c	75	67.954	Oryzias_latipes
ENSTTRG00000006344	POLR1C	64	58.952	ENSORLG00020005555	polr1c	68	58.952	Oryzias_latipes_hni
ENSTTRG00000006344	POLR1C	74	68.340	ENSORLG00020006489	POLR1C	77	68.340	Oryzias_latipes_hni
ENSTTRG00000006344	POLR1C	74	67.300	ENSORLG00015013322	polr1c	75	67.300	Oryzias_latipes_hsok
ENSTTRG00000006344	POLR1C	74	68.966	ENSOMEG00000016527	polr1c	74	68.966	Oryzias_melastigma
ENSTTRG00000006344	POLR1C	76	90.943	ENSOGAG00000016318	POLR1C	76	90.943	Otolemur_garnettii
ENSTTRG00000006344	POLR1C	76	94.297	ENSOARG00000007503	POLR1C	76	94.297	Ovis_aries
ENSTTRG00000006344	POLR1C	76	95.057	ENSPPAG00000043678	POLR1C	76	95.057	Pan_paniscus
ENSTTRG00000006344	POLR1C	76	94.677	ENSPPRG00000009760	POLR1C	76	94.677	Panthera_pardus
ENSTTRG00000006344	POLR1C	76	94.677	ENSPTIG00000014813	POLR1C	76	94.677	Panthera_tigris_altaica
ENSTTRG00000006344	POLR1C	76	95.057	ENSPTRG00000018202	POLR1C	76	95.057	Pan_troglodytes
ENSTTRG00000006344	POLR1C	76	94.297	ENSPANG00000009025	POLR1C	75	94.297	Papio_anubis
ENSTTRG00000006344	POLR1C	76	74.144	ENSPKIG00000009858	polr1c	76	74.144	Paramormyrops_kingsleyae
ENSTTRG00000006344	POLR1C	76	80.989	ENSPSIG00000012580	POLR1C	72	80.989	Pelodiscus_sinensis
ENSTTRG00000006344	POLR1C	76	58.301	ENSPMGG00000012121	polr1c	72	58.301	Periophthalmus_magnuspinnatus
ENSTTRG00000006344	POLR1C	76	92.015	ENSPEMG00000006970	Polr1c	76	92.015	Peromyscus_maniculatus_bairdii
ENSTTRG00000006344	POLR1C	76	71.805	ENSPMAG00000005560	polr1c	76	71.805	Petromyzon_marinus
ENSTTRG00000006344	POLR1C	76	86.692	ENSPCIG00000028137	POLR1C	75	86.692	Phascolarctos_cinereus
ENSTTRG00000006344	POLR1C	76	69.288	ENSPFOG00000014342	POLR1C	76	69.663	Poecilia_formosa
ENSTTRG00000006344	POLR1C	76	69.288	ENSPFOG00000014357	polr1c	75	69.663	Poecilia_formosa
ENSTTRG00000006344	POLR1C	69	64.435	ENSPLAG00000004111	polr1c	99	64.435	Poecilia_latipinna
ENSTTRG00000006344	POLR1C	76	69.288	ENSPMEG00000008420	polr1c	76	69.663	Poecilia_mexicana
ENSTTRG00000006344	POLR1C	76	69.288	ENSPMEG00000011877	-	76	69.663	Poecilia_mexicana
ENSTTRG00000006344	POLR1C	76	70.342	ENSPREG00000007985	polr1c	76	70.342	Poecilia_reticulata
ENSTTRG00000006344	POLR1C	76	94.677	ENSPPYG00000016645	POLR1C	77	94.677	Pongo_abelii
ENSTTRG00000006344	POLR1C	76	93.536	ENSPCOG00000024628	POLR1C	76	93.536	Propithecus_coquereli
ENSTTRG00000006344	POLR1C	76	82.510	ENSPVAG00000005689	POLR1C	76	82.510	Pteropus_vampyrus
ENSTTRG00000006344	POLR1C	76	71.103	ENSPNYG00000003620	polr1c	75	71.103	Pundamilia_nyererei
ENSTTRG00000006344	POLR1C	76	71.103	ENSPNAG00000008443	polr1c	81	71.103	Pygocentrus_nattereri
ENSTTRG00000006344	POLR1C	76	90.494	ENSRNOG00000019079	Polr1c	100	90.000	Rattus_norvegicus
ENSTTRG00000006344	POLR1C	76	94.297	ENSRBIG00000007155	POLR1C	76	94.297	Rhinopithecus_bieti
ENSTTRG00000006344	POLR1C	76	94.677	ENSRROG00000000257	POLR1C	76	94.677	Rhinopithecus_roxellana
ENSTTRG00000006344	POLR1C	72	47.809	YPR110C	RPC40	75	47.809	Saccharomyces_cerevisiae
ENSTTRG00000006344	POLR1C	76	94.297	ENSSBOG00000025735	POLR1C	72	93.304	Saimiri_boliviensis_boliviensis
ENSTTRG00000006344	POLR1C	76	87.452	ENSSHAG00000014456	POLR1C	78	87.452	Sarcophilus_harrisii
ENSTTRG00000006344	POLR1C	76	74.144	ENSSFOG00015019860	polr1c	76	74.144	Scleropages_formosus
ENSTTRG00000006344	POLR1C	76	70.722	ENSSMAG00000018865	polr1c	76	70.722	Scophthalmus_maximus
ENSTTRG00000006344	POLR1C	76	70.412	ENSSDUG00000015745	polr1c	70	71.161	Seriola_dumerili
ENSTTRG00000006344	POLR1C	76	70.412	ENSSLDG00000018285	polr1c	70	71.161	Seriola_lalandi_dorsalis
ENSTTRG00000006344	POLR1C	75	77.395	ENSSPUG00000011822	POLR1C	75	77.395	Sphenodon_punctatus
ENSTTRG00000006344	POLR1C	76	71.161	ENSSPAG00000022369	polr1c	76	71.536	Stegastes_partitus
ENSTTRG00000006344	POLR1C	76	93.916	ENSSSCG00000028007	POLR1C	85	93.916	Sus_scrofa
ENSTTRG00000006344	POLR1C	76	82.129	ENSTGUG00000009159	POLR1C	78	82.129	Taeniopygia_guttata
ENSTTRG00000006344	POLR1C	75	70.301	ENSTRUG00000006264	polr1c	76	70.301	Takifugu_rubripes
ENSTTRG00000006344	POLR1C	51	93.820	ENSTBEG00000002254	POLR1C	100	93.820	Tupaia_belangeri
ENSTTRG00000006344	POLR1C	76	95.057	ENSUAMG00000025602	POLR1C	76	95.057	Ursus_americanus
ENSTTRG00000006344	POLR1C	76	95.057	ENSUMAG00000005938	POLR1C	76	95.057	Ursus_maritimus
ENSTTRG00000006344	POLR1C	76	90.494	ENSVVUG00000028922	POLR1C	75	90.494	Vulpes_vulpes
ENSTTRG00000006344	POLR1C	76	76.136	ENSXETG00000010882	polr1c	76	76.136	Xenopus_tropicalis
ENSTTRG00000006344	POLR1C	76	70.076	ENSXCOG00000014185	polr1c	76	70.076	Xiphophorus_couchianus
ENSTTRG00000006344	POLR1C	76	69.288	ENSXMAG00000015076	polr1c	76	69.663	Xiphophorus_maculatus