EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000006379 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 8685 bases
Position: chrGeneScaffold_2951:133294-141978
Accession: 25980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000006035	zf-CCCH	PF00642.24	1.1e-06	1	1
ENSTTRP00000006035	TRM	PF02005.16	3.1e-146	1	1
ENSTTRP00000006035	Met_10	PF02475.16	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000006379	TRMT1-201	1980	-	ENSTTRP00000006035	659 (aa)	-	UPI00018B64CE

Gene Model

Click here to download ENSTTRG00000006379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000006379's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000006379	TRMT1	98	86.314	ENSG00000104907	TRMT1	100	94.241	Homo_sapiens
ENSTTRG00000006379	TRMT1	99	86.391	ENSAMEG00000012598	TRMT1	96	86.739	Ailuropoda_melanoleuca
ENSTTRG00000006379	TRMT1	92	53.623	ENSACIG00000018680	trmt1	96	53.623	Amphilophus_citrinellus
ENSTTRG00000006379	TRMT1	90	61.603	ENSAOCG00000006781	trmt1	88	61.603	Amphiprion_ocellaris
ENSTTRG00000006379	TRMT1	90	61.667	ENSAPEG00000007712	trmt1	88	61.667	Amphiprion_percula
ENSTTRG00000006379	TRMT1	88	64.433	ENSATEG00000001872	trmt1	86	64.433	Anabas_testudineus
ENSTTRG00000006379	TRMT1	92	63.158	ENSACAG00000003825	TRMT1	96	63.471	Anolis_carolinensis
ENSTTRG00000006379	TRMT1	98	81.202	ENSANAG00000023016	TRMT1	99	83.468	Aotus_nancymaae
ENSTTRG00000006379	TRMT1	93	57.827	ENSACLG00000010073	trmt1	94	60.549	Astatotilapia_calliptera
ENSTTRG00000006379	TRMT1	87	65.052	ENSAMXG00000012026	trmt1	85	65.052	Astyanax_mexicanus
ENSTTRG00000006379	TRMT1	99	87.994	ENSBTAG00000019325	TRMT1	92	88.665	Bos_taurus
ENSTTRG00000006379	TRMT1	78	39.847	WBGene00006613	trm-1	93	39.847	Caenorhabditis_elegans
ENSTTRG00000006379	TRMT1	98	81.692	ENSCJAG00000004566	TRMT1	98	81.591	Callithrix_jacchus
ENSTTRG00000006379	TRMT1	99	87.156	ENSCAFG00000017070	TRMT1	100	87.755	Canis_familiaris
ENSTTRG00000006379	TRMT1	98	86.047	ENSCAFG00020005397	TRMT1	100	83.673	Canis_lupus_dingo
ENSTTRG00000006379	TRMT1	99	87.976	ENSCHIG00000013569	TRMT1	97	88.647	Capra_hircus
ENSTTRG00000006379	TRMT1	98	80.155	ENSTSYG00000003207	TRMT1	98	80.247	Carlito_syrichta
ENSTTRG00000006379	TRMT1	83	80.657	ENSCAPG00000003355	TRMT1	96	80.657	Cavia_aperea
ENSTTRG00000006379	TRMT1	99	80.769	ENSCPOG00000011754	TRMT1	96	81.034	Cavia_porcellus
ENSTTRG00000006379	TRMT1	99	79.755	ENSCCAG00000022263	TRMT1	99	82.792	Cebus_capucinus
ENSTTRG00000006379	TRMT1	99	85.258	ENSCATG00000039850	TRMT1	97	85.736	Cercocebus_atys
ENSTTRG00000006379	TRMT1	84	70.402	ENSCATG00000038220	-	97	70.402	Cercocebus_atys
ENSTTRG00000006379	TRMT1	98	83.411	ENSCLAG00000015295	TRMT1	98	79.685	Chinchilla_lanigera
ENSTTRG00000006379	TRMT1	80	85.932	ENSCSAG00000006500	TRMT1	97	86.550	Chlorocebus_sabaeus
ENSTTRG00000006379	TRMT1	90	66.275	ENSCPBG00000023866	TRMT1	87	66.779	Chrysemys_picta_bellii
ENSTTRG00000006379	TRMT1	84	44.779	ENSCING00000002884	-	98	44.779	Ciona_intestinalis
ENSTTRG00000006379	TRMT1	83	45.208	ENSCSAVG00000010927	-	100	45.772	Ciona_savignyi
ENSTTRG00000006379	TRMT1	95	65.971	ENSCANG00000031650	-	98	65.835	Colobus_angolensis_palliatus
ENSTTRG00000006379	TRMT1	99	69.419	ENSCANG00000040631	TRMT1	98	69.552	Colobus_angolensis_palliatus
ENSTTRG00000006379	TRMT1	99	80.213	ENSCGRG00001022594	Trmt1	97	80.908	Cricetulus_griseus_chok1gshd
ENSTTRG00000006379	TRMT1	99	80.213	ENSCGRG00000017732	Trmt1	97	80.620	Cricetulus_griseus_crigri
ENSTTRG00000006379	TRMT1	87	63.811	ENSCSEG00000001643	trmt1	84	65.370	Cynoglossus_semilaevis
ENSTTRG00000006379	TRMT1	90	63.575	ENSCVAG00000011886	trmt1	88	63.575	Cyprinodon_variegatus
ENSTTRG00000006379	TRMT1	87	63.511	ENSDARG00000010978	trmt1	85	63.511	Danio_rerio
ENSTTRG00000006379	TRMT1	84	62.724	ENSDNOG00000048240	-	95	62.724	Dasypus_novemcinctus
ENSTTRG00000006379	TRMT1	99	79.116	ENSDORG00000014298	Trmt1	98	79.412	Dipodomys_ordii
ENSTTRG00000006379	TRMT1	79	48.399	FBgn0032430	CG6388	89	48.399	Drosophila_melanogaster
ENSTTRG00000006379	TRMT1	55	79.239	ENSETEG00000015483	-	53	79.061	Echinops_telfairi
ENSTTRG00000006379	TRMT1	78	51.257	ENSEBUG00000003449	trmt1	76	50.954	Eptatretus_burgeri
ENSTTRG00000006379	TRMT1	95	85.577	ENSEASG00005004050	TRMT1	100	85.557	Equus_asinus_asinus
ENSTTRG00000006379	TRMT1	95	85.897	ENSECAG00000016149	TRMT1	100	85.871	Equus_caballus
ENSTTRG00000006379	TRMT1	60	70.781	ENSEEUG00000014102	-	100	70.781	Erinaceus_europaeus
ENSTTRG00000006379	TRMT1	91	61.039	ENSELUG00000021659	trmt1	91	61.039	Esox_lucius
ENSTTRG00000006379	TRMT1	100	86.039	ENSFCAG00000000483	TRMT1	98	86.202	Felis_catus
ENSTTRG00000006379	TRMT1	99	81.317	ENSFDAG00000007386	TRMT1	97	81.522	Fukomys_damarensis
ENSTTRG00000006379	TRMT1	81	65.428	ENSFHEG00000012865	trmt1	89	65.242	Fundulus_heteroclitus
ENSTTRG00000006379	TRMT1	87	58.813	ENSGMOG00000006564	trmt1	98	59.337	Gadus_morhua
ENSTTRG00000006379	TRMT1	88	64.384	ENSGAFG00000011862	trmt1	90	64.666	Gambusia_affinis
ENSTTRG00000006379	TRMT1	94	58.240	ENSGACG00000000227	trmt1	94	61.186	Gasterosteus_aculeatus
ENSTTRG00000006379	TRMT1	93	65.147	ENSGAGG00000016432	TRMT1	89	65.147	Gopherus_agassizii
ENSTTRG00000006379	TRMT1	98	86.470	ENSGGOG00000014007	TRMT1	98	86.687	Gorilla_gorilla
ENSTTRG00000006379	TRMT1	88	55.862	ENSHBUG00000008821	trmt1	95	56.034	Haplochromis_burtoni
ENSTTRG00000006379	TRMT1	99	81.346	ENSHGLG00000015972	TRMT1	97	81.464	Heterocephalus_glaber_female
ENSTTRG00000006379	TRMT1	99	75.420	ENSHGLG00100018112	TRMT1	97	75.117	Heterocephalus_glaber_male
ENSTTRG00000006379	TRMT1	87	60.558	ENSHCOG00000009447	trmt1	88	60.558	Hippocampus_comes
ENSTTRG00000006379	TRMT1	87	63.870	ENSIPUG00000002899	trmt1	85	63.870	Ictalurus_punctatus
ENSTTRG00000006379	TRMT1	99	84.674	ENSSTOG00000012531	TRMT1	98	84.938	Ictidomys_tridecemlineatus
ENSTTRG00000006379	TRMT1	94	80.645	ENSJJAG00000017154	Trmt1	98	78.549	Jaculus_jaculus
ENSTTRG00000006379	TRMT1	95	60.377	ENSKMAG00000011809	trmt1	97	63.435	Kryptolebias_marmoratus
ENSTTRG00000006379	TRMT1	87	64.273	ENSLBEG00000012703	trmt1	84	64.273	Labrus_bergylta
ENSTTRG00000006379	TRMT1	87	56.410	ENSLACG00000014585	TRMT1	99	55.229	Latimeria_chalumnae
ENSTTRG00000006379	TRMT1	87	58.793	ENSLOCG00000006479	trmt1	97	59.386	Lepisosteus_oculatus
ENSTTRG00000006379	TRMT1	98	85.162	ENSLAFG00000014072	TRMT1	98	85.266	Loxodonta_africana
ENSTTRG00000006379	TRMT1	99	85.410	ENSMFAG00000033143	TRMT1	97	85.891	Macaca_fascicularis
ENSTTRG00000006379	TRMT1	99	78.843	ENSMMUG00000001167	TRMT1	98	78.980	Macaca_mulatta
ENSTTRG00000006379	TRMT1	99	85.410	ENSMNEG00000037867	TRMT1	97	85.891	Macaca_nemestrina
ENSTTRG00000006379	TRMT1	100	84.825	ENSMLEG00000016142	TRMT1	98	85.271	Mandrillus_leucophaeus
ENSTTRG00000006379	TRMT1	87	64.161	ENSMAMG00000004357	trmt1	85	64.161	Mastacembelus_armatus
ENSTTRG00000006379	TRMT1	93	58.946	ENSMZEG00005014510	trmt1	92	58.995	Maylandia_zebra
ENSTTRG00000006379	TRMT1	98	81.115	ENSMAUG00000011134	Trmt1	97	80.894	Mesocricetus_auratus
ENSTTRG00000006379	TRMT1	99	85.933	ENSMICG00000000793	TRMT1	98	85.913	Microcebus_murinus
ENSTTRG00000006379	TRMT1	97	81.094	ENSMOCG00000015895	Trmt1	98	80.308	Microtus_ochrogaster
ENSTTRG00000006379	TRMT1	87	63.222	ENSMMOG00000011097	trmt1	92	63.222	Mola_mola
ENSTTRG00000006379	TRMT1	94	73.676	ENSMODG00000011619	TRMT1	100	73.676	Monodelphis_domestica
ENSTTRG00000006379	TRMT1	99	80.422	MGP_CAROLIEiJ_G0031304	Trmt1	100	79.087	Mus_caroli
ENSTTRG00000006379	TRMT1	99	80.211	ENSMUSG00000001909	Trmt1	98	80.680	Mus_musculus
ENSTTRG00000006379	TRMT1	99	80.211	MGP_SPRETEiJ_G0032422	Trmt1	98	80.680	Mus_spretus
ENSTTRG00000006379	TRMT1	99	86.018	ENSMPUG00000004210	TRMT1	92	86.646	Mustela_putorius_furo
ENSTTRG00000006379	TRMT1	99	85.106	ENSMLUG00000012809	TRMT1	95	86.250	Myotis_lucifugus
ENSTTRG00000006379	TRMT1	98	80.216	ENSNGAG00000022486	Trmt1	98	80.216	Nannospalax_galili
ENSTTRG00000006379	TRMT1	75	67.164	ENSNBRG00000024376	trmt1	85	67.164	Neolamprologus_brichardi
ENSTTRG00000006379	TRMT1	78	85.165	ENSNLEG00000013019	-	97	85.128	Nomascus_leucogenys
ENSTTRG00000006379	TRMT1	91	72.408	ENSMEUG00000013756	TRMT1	100	72.408	Notamacropus_eugenii
ENSTTRG00000006379	TRMT1	80	85.360	ENSOPRG00000009471	-	78	85.360	Ochotona_princeps
ENSTTRG00000006379	TRMT1	98	81.636	ENSODEG00000010323	TRMT1	97	81.690	Octodon_degus
ENSTTRG00000006379	TRMT1	94	61.600	ENSONIG00000000400	trmt1	96	62.664	Oreochromis_niloticus
ENSTTRG00000006379	TRMT1	79	85.851	ENSOCUG00000021934	TRMT1	97	85.992	Oryctolagus_cuniculus
ENSTTRG00000006379	TRMT1	95	54.788	ENSORLG00000020074	trmt1	90	58.864	Oryzias_latipes
ENSTTRG00000006379	TRMT1	87	62.021	ENSORLG00020007561	trmt1	90	61.847	Oryzias_latipes_hni
ENSTTRG00000006379	TRMT1	95	58.110	ENSORLG00015006547	trmt1	86	62.021	Oryzias_latipes_hsok
ENSTTRG00000006379	TRMT1	96	59.219	ENSOMEG00000019343	trmt1	94	59.807	Oryzias_melastigma
ENSTTRG00000006379	TRMT1	96	81.804	ENSOGAG00000025576	TRMT1	98	82.456	Otolemur_garnettii
ENSTTRG00000006379	TRMT1	99	71.667	ENSOARG00000009397	TRMT1	91	72.291	Ovis_aries
ENSTTRG00000006379	TRMT1	99	78.000	ENSPPRG00000012117	TRMT1	99	78.140	Panthera_pardus
ENSTTRG00000006379	TRMT1	77	86.018	ENSPTIG00000008833	TRMT1	96	86.420	Panthera_tigris_altaica
ENSTTRG00000006379	TRMT1	98	86.470	ENSPTRG00000010557	TRMT1	98	86.533	Pan_troglodytes
ENSTTRG00000006379	TRMT1	99	65.798	ENSPTRG00000050421	-	98	66.099	Pan_troglodytes
ENSTTRG00000006379	TRMT1	85	70.502	ENSPANG00000034058	-	96	70.502	Papio_anubis
ENSTTRG00000006379	TRMT1	99	85.649	ENSPANG00000009247	TRMT1	98	85.891	Papio_anubis
ENSTTRG00000006379	TRMT1	87	65.451	ENSPKIG00000005309	trmt1	84	65.451	Paramormyrops_kingsleyae
ENSTTRG00000006379	TRMT1	88	56.261	ENSPSIG00000008762	TRMT1	83	56.261	Pelodiscus_sinensis
ENSTTRG00000006379	TRMT1	87	62.544	ENSPMGG00000019764	trmt1	90	62.544	Periophthalmus_magnuspinnatus
ENSTTRG00000006379	TRMT1	97	83.125	ENSPEMG00000016247	Trmt1	98	82.000	Peromyscus_maniculatus_bairdii
ENSTTRG00000006379	TRMT1	87	58.392	ENSPMAG00000004329	trmt1	89	58.392	Petromyzon_marinus
ENSTTRG00000006379	TRMT1	97	71.053	ENSPCIG00000019273	TRMT1	97	71.860	Phascolarctos_cinereus
ENSTTRG00000006379	TRMT1	88	66.038	ENSPFOG00000008527	trmt1	89	66.038	Poecilia_formosa
ENSTTRG00000006379	TRMT1	88	66.038	ENSPLAG00000018788	trmt1	89	67.992	Poecilia_latipinna
ENSTTRG00000006379	TRMT1	88	65.866	ENSPMEG00000013120	trmt1	89	65.866	Poecilia_mexicana
ENSTTRG00000006379	TRMT1	87	65.445	ENSPREG00000000211	trmt1	85	65.734	Poecilia_reticulata
ENSTTRG00000006379	TRMT1	98	86.003	ENSPPYG00000009622	TRMT1	98	86.068	Pongo_abelii
ENSTTRG00000006379	TRMT1	99	76.344	ENSPCAG00000003698	TRMT1	99	76.344	Procavia_capensis
ENSTTRG00000006379	TRMT1	100	84.977	ENSPCOG00000008653	TRMT1	98	85.294	Propithecus_coquereli
ENSTTRG00000006379	TRMT1	99	86.260	ENSPVAG00000015076	TRMT1	98	86.801	Pteropus_vampyrus
ENSTTRG00000006379	TRMT1	88	59.520	ENSPNYG00000013960	trmt1	94	59.520	Pundamilia_nyererei
ENSTTRG00000006379	TRMT1	78	77.419	ENSPNAG00000024859	trmt1	88	77.419	Pygocentrus_nattereri
ENSTTRG00000006379	TRMT1	97	81.123	ENSRNOG00000002914	Trmt1	100	81.123	Rattus_norvegicus
ENSTTRG00000006379	TRMT1	99	84.954	ENSRBIG00000038324	TRMT1	97	85.426	Rhinopithecus_bieti
ENSTTRG00000006379	TRMT1	95	67.200	ENSRBIG00000037505	-	99	67.030	Rhinopithecus_bieti
ENSTTRG00000006379	TRMT1	95	66.400	ENSRROG00000031847	-	98	66.252	Rhinopithecus_roxellana
ENSTTRG00000006379	TRMT1	99	84.802	ENSRROG00000028599	TRMT1	97	85.271	Rhinopithecus_roxellana
ENSTTRG00000006379	TRMT1	77	36.765	YDR120C	-	92	36.822	Saccharomyces_cerevisiae
ENSTTRG00000006379	TRMT1	99	80.828	ENSSBOG00000028861	TRMT1	99	82.792	Saimiri_boliviensis_boliviensis
ENSTTRG00000006379	TRMT1	89	74.617	ENSSHAG00000014381	TRMT1	99	73.008	Sarcophilus_harrisii
ENSTTRG00000006379	TRMT1	88	65.338	ENSSFOG00015004139	trmt1	84	65.338	Scleropages_formosus
ENSTTRG00000006379	TRMT1	87	64.983	ENSSMAG00000021136	trmt1	87	63.729	Scophthalmus_maximus
ENSTTRG00000006379	TRMT1	88	63.667	ENSSDUG00000012740	trmt1	86	63.667	Seriola_dumerili
ENSTTRG00000006379	TRMT1	88	63.158	ENSSLDG00000005971	trmt1	86	63.158	Seriola_lalandi_dorsalis
ENSTTRG00000006379	TRMT1	86	81.305	ENSSARG00000005138	TRMT1	99	81.305	Sorex_araneus
ENSTTRG00000006379	TRMT1	88	55.479	ENSSPUG00000001084	TRMT1	89	60.456	Sphenodon_punctatus
ENSTTRG00000006379	TRMT1	90	60.738	ENSSPAG00000007153	trmt1	97	60.738	Stegastes_partitus
ENSTTRG00000006379	TRMT1	97	90.909	ENSSSCG00000013744	TRMT1	100	90.909	Sus_scrofa
ENSTTRG00000006379	TRMT1	85	60.457	ENSTRUG00000010700	trmt1	85	60.627	Takifugu_rubripes
ENSTTRG00000006379	TRMT1	87	63.002	ENSTNIG00000018808	trmt1	98	63.002	Tetraodon_nigroviridis
ENSTTRG00000006379	TRMT1	99	86.636	ENSUAMG00000022911	TRMT1	98	87.051	Ursus_americanus
ENSTTRG00000006379	TRMT1	97	86.813	ENSUMAG00000006027	TRMT1	100	86.813	Ursus_maritimus
ENSTTRG00000006379	TRMT1	99	87.462	ENSVVUG00000024177	TRMT1	97	87.733	Vulpes_vulpes
ENSTTRG00000006379	TRMT1	70	68.980	ENSXETG00000033863	TRMT1	92	68.980	Xenopus_tropicalis
ENSTTRG00000006379	TRMT1	87	65.445	ENSXCOG00000015733	trmt1	88	65.734	Xiphophorus_couchianus
ENSTTRG00000006379	TRMT1	87	65.217	ENSXMAG00000013823	trmt1	98	65.391	Xiphophorus_maculatus