EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000006417 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 15394 bases
Position: chrGeneScaffold_489:2302-17695
Accession: 26935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000006073	RtcB	PF01139.17	1.8e-131	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000006417	RTCB-201	1410	-	ENSTTRP00000006073	470 (aa)	-	UPI00018B7BE9

Gene Model

Click here to download ENSTTRG00000006417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000006417's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000006417	RTCB	100	98.936	ENSG00000100220	RTCB	93	98.936	Homo_sapiens
ENSTTRG00000006417	RTCB	100	93.404	ENSAPOG00000006040	rtcb	93	93.404	Acanthochromis_polyacanthus
ENSTTRG00000006417	RTCB	100	98.723	ENSAMEG00000016152	RTCB	93	98.723	Ailuropoda_melanoleuca
ENSTTRG00000006417	RTCB	100	88.511	ENSACIG00000009083	rtcb	93	88.511	Amphilophus_citrinellus
ENSTTRG00000006417	RTCB	100	93.617	ENSAOCG00000005662	rtcb	93	93.617	Amphiprion_ocellaris
ENSTTRG00000006417	RTCB	100	93.617	ENSAPEG00000024701	rtcb	93	93.617	Amphiprion_percula
ENSTTRG00000006417	RTCB	96	92.699	ENSAPEG00000024653	rtcb	95	92.699	Amphiprion_percula
ENSTTRG00000006417	RTCB	100	93.191	ENSATEG00000000618	rtcb	93	93.191	Anabas_testudineus
ENSTTRG00000006417	RTCB	100	92.975	ENSACAG00000014817	RTCB	93	92.975	Anolis_carolinensis
ENSTTRG00000006417	RTCB	100	82.766	ENSANAG00000018191	-	85	82.766	Aotus_nancymaae
ENSTTRG00000006417	RTCB	70	83.636	ENSANAG00000023724	-	75	83.636	Aotus_nancymaae
ENSTTRG00000006417	RTCB	100	92.128	ENSACLG00000008367	rtcb	92	93.176	Astatotilapia_calliptera
ENSTTRG00000006417	RTCB	100	93.404	ENSAMXG00000042320	rtcb	93	93.404	Astyanax_mexicanus
ENSTTRG00000006417	RTCB	100	98.511	ENSBTAG00000011070	RTCB	93	98.511	Bos_taurus
ENSTTRG00000006417	RTCB	100	72.128	WBGene00008877	rtcb-1	93	72.128	Caenorhabditis_elegans
ENSTTRG00000006417	RTCB	100	98.511	ENSCJAG00000006128	RTCB	93	98.511	Callithrix_jacchus
ENSTTRG00000006417	RTCB	100	94.468	ENSCAFG00000010789	-	93	94.468	Canis_familiaris
ENSTTRG00000006417	RTCB	100	98.723	ENSCAFG00000001785	RTCB	93	98.723	Canis_familiaris
ENSTTRG00000006417	RTCB	94	95.000	ENSCAFG00020018953	-	99	95.000	Canis_lupus_dingo
ENSTTRG00000006417	RTCB	100	98.723	ENSCAFG00020004890	-	93	98.723	Canis_lupus_dingo
ENSTTRG00000006417	RTCB	100	98.723	ENSCHIG00000027009	-	93	98.723	Capra_hircus
ENSTTRG00000006417	RTCB	100	98.085	ENSTSYG00000012320	RTCB	93	98.085	Carlito_syrichta
ENSTTRG00000006417	RTCB	94	98.416	ENSCAPG00000011647	RTCB	89	98.416	Cavia_aperea
ENSTTRG00000006417	RTCB	100	98.511	ENSCCAG00000000618	RTCB	93	98.511	Cebus_capucinus
ENSTTRG00000006417	RTCB	100	98.511	ENSCATG00000033424	RTCB	93	98.511	Cercocebus_atys
ENSTTRG00000006417	RTCB	100	98.723	ENSCLAG00000007997	RTCB	93	98.723	Chinchilla_lanigera
ENSTTRG00000006417	RTCB	100	98.298	ENSCSAG00000008351	RTCB	93	98.298	Chlorocebus_sabaeus
ENSTTRG00000006417	RTCB	100	83.404	ENSCHOG00000009123	RTCB	93	83.404	Choloepus_hoffmanni
ENSTTRG00000006417	RTCB	100	96.170	ENSCPBG00000023184	RTCB	93	96.170	Chrysemys_picta_bellii
ENSTTRG00000006417	RTCB	100	81.915	ENSCING00000003830	-	93	81.915	Ciona_intestinalis
ENSTTRG00000006417	RTCB	100	82.128	ENSCSAVG00000008124	-	92	82.128	Ciona_savignyi
ENSTTRG00000006417	RTCB	100	98.511	ENSCANG00000001891	RTCB	97	98.511	Colobus_angolensis_palliatus
ENSTTRG00000006417	RTCB	100	98.298	ENSCGRG00001011173	Rtcb	93	98.298	Cricetulus_griseus_chok1gshd
ENSTTRG00000006417	RTCB	93	98.853	ENSCGRG00000009587	-	89	98.853	Cricetulus_griseus_crigri
ENSTTRG00000006417	RTCB	100	92.553	ENSCSEG00000003986	rtcb	93	92.553	Cynoglossus_semilaevis
ENSTTRG00000006417	RTCB	86	95.062	ENSCVAG00000000569	rtcb	92	95.062	Cyprinodon_variegatus
ENSTTRG00000006417	RTCB	100	92.766	ENSDARG00000101047	rtcb	93	92.766	Danio_rerio
ENSTTRG00000006417	RTCB	86	96.069	ENSDNOG00000012425	RTCB	99	96.069	Dasypus_novemcinctus
ENSTTRG00000006417	RTCB	100	97.872	ENSDORG00000010855	Rtcb	93	97.872	Dipodomys_ordii
ENSTTRG00000006417	RTCB	99	85.684	FBgn0032781	RtcB	92	85.684	Drosophila_melanogaster
ENSTTRG00000006417	RTCB	100	91.702	ENSETEG00000001988	RTCB	93	91.702	Echinops_telfairi
ENSTTRG00000006417	RTCB	100	84.681	ENSEBUG00000014235	rtcb	93	84.681	Eptatretus_burgeri
ENSTTRG00000006417	RTCB	100	98.723	ENSEASG00005019059	RTCB	93	98.723	Equus_asinus_asinus
ENSTTRG00000006417	RTCB	100	98.723	ENSECAG00000023998	RTCB	93	98.723	Equus_caballus
ENSTTRG00000006417	RTCB	79	98.656	ENSEEUG00000006251	RTCB	83	98.656	Erinaceus_europaeus
ENSTTRG00000006417	RTCB	100	80.972	ENSELUG00000009275	rtcb	93	80.972	Esox_lucius
ENSTTRG00000006417	RTCB	100	98.936	ENSFCAG00000026480	RTCB	93	98.936	Felis_catus
ENSTTRG00000006417	RTCB	100	97.021	ENSFALG00000013334	RTCB	93	97.021	Ficedula_albicollis
ENSTTRG00000006417	RTCB	100	98.723	ENSFDAG00000018150	RTCB	93	98.723	Fukomys_damarensis
ENSTTRG00000006417	RTCB	100	93.617	ENSFHEG00000009595	rtcb	93	93.617	Fundulus_heteroclitus
ENSTTRG00000006417	RTCB	100	91.064	ENSGMOG00000018882	rtcb	93	91.064	Gadus_morhua
ENSTTRG00000006417	RTCB	100	97.021	ENSGALG00000012611	RTCB	93	97.021	Gallus_gallus
ENSTTRG00000006417	RTCB	100	94.043	ENSGAFG00000004198	rtcb	93	94.043	Gambusia_affinis
ENSTTRG00000006417	RTCB	100	92.553	ENSGACG00000000586	rtcb	93	92.553	Gasterosteus_aculeatus
ENSTTRG00000006417	RTCB	100	95.745	ENSGAGG00000019133	RTCB	98	95.745	Gopherus_agassizii
ENSTTRG00000006417	RTCB	100	98.936	ENSGGOG00000011402	RTCB	93	98.936	Gorilla_gorilla
ENSTTRG00000006417	RTCB	100	92.128	ENSHBUG00000020571	rtcb	93	92.128	Haplochromis_burtoni
ENSTTRG00000006417	RTCB	93	69.178	ENSHGLG00000001066	-	91	69.178	Heterocephalus_glaber_female
ENSTTRG00000006417	RTCB	100	98.723	ENSHGLG00000004492	RTCB	93	98.723	Heterocephalus_glaber_female
ENSTTRG00000006417	RTCB	100	98.723	ENSHGLG00100008965	RTCB	93	98.723	Heterocephalus_glaber_male
ENSTTRG00000006417	RTCB	100	90.678	ENSHCOG00000006450	rtcb	93	90.678	Hippocampus_comes
ENSTTRG00000006417	RTCB	100	93.404	ENSIPUG00000015443	rtcb	93	93.404	Ictalurus_punctatus
ENSTTRG00000006417	RTCB	100	98.936	ENSSTOG00000003878	RTCB	93	98.936	Ictidomys_tridecemlineatus
ENSTTRG00000006417	RTCB	100	98.085	ENSJJAG00000010667	Rtcb	93	98.085	Jaculus_jaculus
ENSTTRG00000006417	RTCB	100	93.404	ENSKMAG00000013178	rtcb	93	93.404	Kryptolebias_marmoratus
ENSTTRG00000006417	RTCB	100	93.830	ENSLBEG00000010566	RTCB	93	93.830	Labrus_bergylta
ENSTTRG00000006417	RTCB	100	92.766	ENSLBEG00000000214	rtcb	93	92.766	Labrus_bergylta
ENSTTRG00000006417	RTCB	100	94.894	ENSLACG00000013033	RTCB	93	94.894	Latimeria_chalumnae
ENSTTRG00000006417	RTCB	100	93.830	ENSLOCG00000016515	rtcb	93	93.830	Lepisosteus_oculatus
ENSTTRG00000006417	RTCB	100	98.085	ENSLAFG00000002082	RTCB	93	98.085	Loxodonta_africana
ENSTTRG00000006417	RTCB	100	98.298	ENSMFAG00000034419	RTCB	93	98.298	Macaca_fascicularis
ENSTTRG00000006417	RTCB	100	98.298	ENSMMUG00000006720	RTCB	93	98.298	Macaca_mulatta
ENSTTRG00000006417	RTCB	100	98.298	ENSMNEG00000040669	RTCB	93	98.298	Macaca_nemestrina
ENSTTRG00000006417	RTCB	100	98.511	ENSMLEG00000040505	RTCB	93	98.511	Mandrillus_leucophaeus
ENSTTRG00000006417	RTCB	100	93.191	ENSMAMG00000020676	rtcb	93	93.191	Mastacembelus_armatus
ENSTTRG00000006417	RTCB	100	92.128	ENSMZEG00005018942	rtcb	93	92.128	Maylandia_zebra
ENSTTRG00000006417	RTCB	100	96.610	ENSMGAG00000012805	RTCB	93	96.610	Meleagris_gallopavo
ENSTTRG00000006417	RTCB	57	100.000	ENSMAUG00000008301	Rtcb	88	100.000	Mesocricetus_auratus
ENSTTRG00000006417	RTCB	100	98.723	ENSMICG00000013303	-	93	98.723	Microcebus_murinus
ENSTTRG00000006417	RTCB	100	78.511	ENSMICG00000036677	-	92	78.511	Microcebus_murinus
ENSTTRG00000006417	RTCB	100	98.298	ENSMOCG00000002440	Rtcb	93	98.298	Microtus_ochrogaster
ENSTTRG00000006417	RTCB	100	93.191	ENSMMOG00000005987	rtcb	93	93.191	Mola_mola
ENSTTRG00000006417	RTCB	100	97.234	ENSMODG00000001414	RTCB	93	97.234	Monodelphis_domestica
ENSTTRG00000006417	RTCB	100	93.617	ENSMALG00000007603	rtcb	93	93.617	Monopterus_albus
ENSTTRG00000006417	RTCB	100	98.298	MGP_CAROLIEiJ_G0015689	Rtcb	93	98.298	Mus_caroli
ENSTTRG00000006417	RTCB	100	98.298	ENSMUSG00000001783	Rtcb	93	98.298	Mus_musculus
ENSTTRG00000006417	RTCB	100	98.298	MGP_PahariEiJ_G0031396	Rtcb	93	98.298	Mus_pahari
ENSTTRG00000006417	RTCB	100	98.298	MGP_SPRETEiJ_G0016507	Rtcb	93	98.298	Mus_spretus
ENSTTRG00000006417	RTCB	100	98.723	ENSMPUG00000012285	RTCB	93	98.723	Mustela_putorius_furo
ENSTTRG00000006417	RTCB	100	96.610	ENSMLUG00000007803	RTCB	93	96.610	Myotis_lucifugus
ENSTTRG00000006417	RTCB	70	100.000	ENSNGAG00000005093	Rtcb	90	100.000	Nannospalax_galili
ENSTTRG00000006417	RTCB	100	92.340	ENSNBRG00000017202	rtcb	93	92.340	Neolamprologus_brichardi
ENSTTRG00000006417	RTCB	100	98.936	ENSNLEG00000004960	RTCB	93	98.936	Nomascus_leucogenys
ENSTTRG00000006417	RTCB	100	70.000	ENSMEUG00000007809	-	93	70.000	Notamacropus_eugenii
ENSTTRG00000006417	RTCB	79	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSTTRG00000006417	RTCB	81	100.000	ENSODEG00000013033	-	91	100.000	Octodon_degus
ENSTTRG00000006417	RTCB	99	64.316	ENSODEG00000005042	-	91	64.316	Octodon_degus
ENSTTRG00000006417	RTCB	100	93.404	ENSONIG00000007474	rtcb	93	93.404	Oreochromis_niloticus
ENSTTRG00000006417	RTCB	100	97.234	ENSOANG00000005524	RTCB	93	97.234	Ornithorhynchus_anatinus
ENSTTRG00000006417	RTCB	100	98.723	ENSOCUG00000008270	RTCB	96	98.723	Oryctolagus_cuniculus
ENSTTRG00000006417	RTCB	100	93.191	ENSORLG00000020093	rtcb	93	93.191	Oryzias_latipes
ENSTTRG00000006417	RTCB	100	93.191	ENSORLG00020003706	rtcb	93	93.191	Oryzias_latipes_hni
ENSTTRG00000006417	RTCB	100	93.404	ENSORLG00015002968	rtcb	93	93.404	Oryzias_latipes_hsok
ENSTTRG00000006417	RTCB	100	92.979	ENSOMEG00000021278	rtcb	93	92.979	Oryzias_melastigma
ENSTTRG00000006417	RTCB	100	98.511	ENSOGAG00000001425	RTCB	93	98.511	Otolemur_garnettii
ENSTTRG00000006417	RTCB	100	98.723	ENSOARG00000018008	RTCB	93	98.723	Ovis_aries
ENSTTRG00000006417	RTCB	100	98.936	ENSPPAG00000028667	RTCB	93	98.936	Pan_paniscus
ENSTTRG00000006417	RTCB	100	98.936	ENSPPRG00000004038	RTCB	93	98.936	Panthera_pardus
ENSTTRG00000006417	RTCB	94	95.455	ENSPTIG00000020499	RTCB	90	95.455	Panthera_tigris_altaica
ENSTTRG00000006417	RTCB	100	98.936	ENSPTRG00000014287	RTCB	93	98.936	Pan_troglodytes
ENSTTRG00000006417	RTCB	100	98.298	ENSPANG00000016035	RTCB	93	98.298	Papio_anubis
ENSTTRG00000006417	RTCB	100	91.489	ENSPKIG00000001881	rtcb	93	91.489	Paramormyrops_kingsleyae
ENSTTRG00000006417	RTCB	90	97.882	ENSPSIG00000011690	RTCB	92	97.882	Pelodiscus_sinensis
ENSTTRG00000006417	RTCB	100	93.404	ENSPMGG00000016672	rtcb	93	93.404	Periophthalmus_magnuspinnatus
ENSTTRG00000006417	RTCB	100	98.298	ENSPEMG00000019548	Rtcb	93	98.298	Peromyscus_maniculatus_bairdii
ENSTTRG00000006417	RTCB	100	91.064	ENSPMAG00000005657	rtcb	93	91.064	Petromyzon_marinus
ENSTTRG00000006417	RTCB	100	97.660	ENSPCIG00000009467	RTCB	93	97.660	Phascolarctos_cinereus
ENSTTRG00000006417	RTCB	100	94.468	ENSPFOG00000003058	rtcb	93	94.468	Poecilia_formosa
ENSTTRG00000006417	RTCB	100	94.255	ENSPLAG00000017663	rtcb	93	94.255	Poecilia_latipinna
ENSTTRG00000006417	RTCB	100	94.468	ENSPMEG00000006227	rtcb	93	94.468	Poecilia_mexicana
ENSTTRG00000006417	RTCB	100	94.043	ENSPREG00000018467	rtcb	93	94.043	Poecilia_reticulata
ENSTTRG00000006417	RTCB	100	98.936	ENSPPYG00000011752	RTCB	93	98.936	Pongo_abelii
ENSTTRG00000006417	RTCB	100	80.720	ENSPCAG00000013641	RTCB	100	80.720	Procavia_capensis
ENSTTRG00000006417	RTCB	100	98.511	ENSPCOG00000017243	RTCB	93	98.511	Propithecus_coquereli
ENSTTRG00000006417	RTCB	100	97.872	ENSPVAG00000002380	RTCB	100	97.872	Pteropus_vampyrus
ENSTTRG00000006417	RTCB	100	92.128	ENSPNYG00000022760	rtcb	93	92.128	Pundamilia_nyererei
ENSTTRG00000006417	RTCB	100	94.043	ENSPNAG00000009209	rtcb	93	94.043	Pygocentrus_nattereri
ENSTTRG00000006417	RTCB	100	98.298	ENSRNOG00000004813	Rtcb	93	98.298	Rattus_norvegicus
ENSTTRG00000006417	RTCB	100	88.960	ENSRBIG00000042090	RTCB	93	88.960	Rhinopithecus_bieti
ENSTTRG00000006417	RTCB	100	93.830	ENSSBOG00000020085	-	93	93.830	Saimiri_boliviensis_boliviensis
ENSTTRG00000006417	RTCB	93	98.861	ENSSHAG00000016277	RTCB	93	98.861	Sarcophilus_harrisii
ENSTTRG00000006417	RTCB	100	92.553	ENSSFOG00015011572	RTCB	93	92.553	Scleropages_formosus
ENSTTRG00000006417	RTCB	100	92.128	ENSSFOG00015000763	rtcb	93	92.128	Scleropages_formosus
ENSTTRG00000006417	RTCB	100	91.277	ENSSMAG00000005096	rtcb	93	89.362	Scophthalmus_maximus
ENSTTRG00000006417	RTCB	100	92.553	ENSSDUG00000012605	rtcb	93	92.553	Seriola_dumerili
ENSTTRG00000006417	RTCB	100	92.553	ENSSLDG00000019458	rtcb	93	92.553	Seriola_lalandi_dorsalis
ENSTTRG00000006417	RTCB	64	72.910	ENSSARG00000004799	-	63	72.910	Sorex_araneus
ENSTTRG00000006417	RTCB	100	96.170	ENSSPUG00000012814	RTCB	93	96.170	Sphenodon_punctatus
ENSTTRG00000006417	RTCB	100	93.617	ENSSPAG00000004623	rtcb	93	93.617	Stegastes_partitus
ENSTTRG00000006417	RTCB	100	98.936	ENSSSCG00000000158	RTCB	93	98.936	Sus_scrofa
ENSTTRG00000006417	RTCB	100	97.021	ENSTGUG00000010947	RTCB	93	97.021	Taeniopygia_guttata
ENSTTRG00000006417	RTCB	90	94.353	ENSTRUG00000009880	rtcb	100	90.964	Takifugu_rubripes
ENSTTRG00000006417	RTCB	100	92.553	ENSTNIG00000002484	rtcb	93	92.553	Tetraodon_nigroviridis
ENSTTRG00000006417	RTCB	100	84.255	ENSTBEG00000004418	RTCB	93	84.255	Tupaia_belangeri
ENSTTRG00000006417	RTCB	100	98.723	ENSUAMG00000022792	RTCB	93	98.723	Ursus_americanus
ENSTTRG00000006417	RTCB	100	98.723	ENSUMAG00000017225	RTCB	93	98.723	Ursus_maritimus
ENSTTRG00000006417	RTCB	100	98.936	ENSVPAG00000005375	RTCB	93	98.936	Vicugna_pacos
ENSTTRG00000006417	RTCB	100	98.723	ENSVVUG00000023408	RTCB	93	98.723	Vulpes_vulpes
ENSTTRG00000006417	RTCB	100	94.043	ENSXETG00000011523	rtcb	93	94.043	Xenopus_tropicalis
ENSTTRG00000006417	RTCB	100	94.043	ENSXMAG00000002855	rtcb	93	94.043	Xiphophorus_maculatus