EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000006673 (Gene tree)
Gene ID: -
Gene Symbol: RAB5C
Alias: RAB5CL|RABL
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 3676 bases
Position: chrGeneScaffold_2792:320442-324117
Accession: 101330506
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000006314	MMR_HSR1	PF01926.23	7.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000006671	-	651	-	ENSTTRP00000006314	216 (aa)	XP_019794955	A0A2U4BP79

Gene Model

Click here to download ENSTTRG00000006673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000006673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000006673	RAB5C	72	30.818	ENSTTRG00000004102	RAB34	61	30.818
ENSTTRG00000006673	RAB5C	75	42.236	ENSTTRG00000011183	-	79	42.236
ENSTTRG00000006673	RAB5C	94	39.806	ENSTTRG00000005374	RAB6A	98	39.806
ENSTTRG00000006673	RAB5C	75	39.759	ENSTTRG00000003887	RAB33A	70	39.759
ENSTTRG00000006673	RAB5C	97	85.167	ENSTTRG00000015001	RAB5B	97	85.167
ENSTTRG00000006673	RAB5C	76	43.293	ENSTTRG00000010425	RAB14	76	43.293
ENSTTRG00000006673	RAB5C	89	42.647	ENSTTRG00000011885	RAB11A	93	42.647
ENSTTRG00000006673	RAB5C	73	31.288	ENSTTRG00000015163	DNAJC27	60	31.288
ENSTTRG00000006673	RAB5C	73	34.177	ENSTTRG00000002070	-	91	34.177
ENSTTRG00000006673	RAB5C	77	31.737	ENSTTRG00000011120	HRAS	87	31.737
ENSTTRG00000006673	RAB5C	78	43.195	ENSTTRG00000006100	RAB30	83	43.195
ENSTTRG00000006673	RAB5C	85	37.368	ENSTTRG00000008711	RAB12	99	35.111
ENSTTRG00000006673	RAB5C	82	30.168	ENSTTRG00000010419	RRAS2	87	30.168
ENSTTRG00000006673	RAB5C	77	42.442	ENSTTRG00000015258	RAB7A	83	42.442
ENSTTRG00000006673	RAB5C	75	46.626	ENSTTRG00000014408	RAB1B	81	46.626
ENSTTRG00000006673	RAB5C	75	33.129	ENSTTRG00000012599	KRAS	85	33.129
ENSTTRG00000006673	RAB5C	89	35.354	ENSTTRG00000003956	RAB9B	97	35.354
ENSTTRG00000006673	RAB5C	77	32.749	ENSTTRG00000015290	RERG	84	32.749
ENSTTRG00000006673	RAB5C	89	37.811	ENSTTRG00000013345	RAB25	93	37.811
ENSTTRG00000006673	RAB5C	89	34.328	ENSTTRG00000014013	RAB9A	97	34.328
ENSTTRG00000006673	RAB5C	90	47.423	ENSTTRG00000015587	RAB22A	98	47.423
ENSTTRG00000006673	RAB5C	90	42.995	ENSTTRG00000009758	RAB11B	94	42.995
ENSTTRG00000006673	RAB5C	100	87.037	ENSTTRG00000001374	RAB5A	100	87.037

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000006673	RAB5C	100	98.148	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSTTRG00000006673	RAB5C	99	88.372	ENSAPOG00000016864	rab5c	98	90.233	Acanthochromis_polyacanthus
ENSTTRG00000006673	RAB5C	100	98.148	ENSAMEG00000006003	RAB5C	100	98.148	Ailuropoda_melanoleuca
ENSTTRG00000006673	RAB5C	99	87.963	ENSACIG00000010896	rab5c	98	89.815	Amphilophus_citrinellus
ENSTTRG00000006673	RAB5C	99	88.426	ENSAOCG00000016614	rab5c	98	90.278	Amphiprion_ocellaris
ENSTTRG00000006673	RAB5C	97	88.152	ENSAPEG00000017868	-	97	90.047	Amphiprion_percula
ENSTTRG00000006673	RAB5C	100	88.991	ENSATEG00000001937	rab5c	100	90.826	Anabas_testudineus
ENSTTRG00000006673	RAB5C	94	98.039	ENSANAG00000025390	RAB5C	100	98.039	Aotus_nancymaae
ENSTTRG00000006673	RAB5C	99	87.037	ENSACLG00000002706	rab5c	98	89.352	Astatotilapia_calliptera
ENSTTRG00000006673	RAB5C	96	89.100	ENSACLG00000008615	-	99	88.584	Astatotilapia_calliptera
ENSTTRG00000006673	RAB5C	96	88.095	ENSAMXG00000037267	-	99	90.000	Astyanax_mexicanus
ENSTTRG00000006673	RAB5C	99	88.940	ENSAMXG00000043717	rab5c	99	90.367	Astyanax_mexicanus
ENSTTRG00000006673	RAB5C	100	99.074	ENSBTAG00000006982	RAB5C	100	99.074	Bos_taurus
ENSTTRG00000006673	RAB5C	99	74.886	WBGene00004268	rab-5	99	74.886	Caenorhabditis_elegans
ENSTTRG00000006673	RAB5C	100	97.685	ENSCAFG00000015629	RAB5C	100	97.685	Canis_familiaris
ENSTTRG00000006673	RAB5C	100	97.685	ENSCAFG00020013537	RAB5C	100	97.685	Canis_lupus_dingo
ENSTTRG00000006673	RAB5C	100	99.074	ENSCHIG00000012960	RAB5C	100	99.074	Capra_hircus
ENSTTRG00000006673	RAB5C	100	98.611	ENSTSYG00000030531	RAB5C	100	98.611	Carlito_syrichta
ENSTTRG00000006673	RAB5C	100	97.685	ENSCCAG00000025940	RAB5C	100	97.685	Cebus_capucinus
ENSTTRG00000006673	RAB5C	100	98.148	ENSCATG00000040873	RAB5C	100	98.148	Cercocebus_atys
ENSTTRG00000006673	RAB5C	100	97.222	ENSCLAG00000016650	RAB5C	100	97.222	Chinchilla_lanigera
ENSTTRG00000006673	RAB5C	82	98.876	ENSCHOG00000009886	RAB5C	100	98.876	Choloepus_hoffmanni
ENSTTRG00000006673	RAB5C	100	76.389	ENSCING00000003340	-	99	76.389	Ciona_intestinalis
ENSTTRG00000006673	RAB5C	99	75.455	ENSCSAVG00000000613	-	99	83.951	Ciona_savignyi
ENSTTRG00000006673	RAB5C	100	97.685	ENSCGRG00001014226	Rab5c	100	97.685	Cricetulus_griseus_chok1gshd
ENSTTRG00000006673	RAB5C	100	97.685	ENSCGRG00000007534	Rab5c	100	97.685	Cricetulus_griseus_crigri
ENSTTRG00000006673	RAB5C	99	90.278	ENSCSEG00000017024	rab5c	98	90.278	Cynoglossus_semilaevis
ENSTTRG00000006673	RAB5C	99	88.426	ENSCVAG00000009550	rab5c	98	90.278	Cyprinodon_variegatus
ENSTTRG00000006673	RAB5C	100	98.611	ENSDNOG00000038853	RAB5C	100	98.611	Dasypus_novemcinctus
ENSTTRG00000006673	RAB5C	100	97.685	ENSDORG00000006819	Rab5c	100	97.685	Dipodomys_ordii
ENSTTRG00000006673	RAB5C	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSTTRG00000006673	RAB5C	99	80.000	ENSEBUG00000014794	rab5c	100	80.000	Eptatretus_burgeri
ENSTTRG00000006673	RAB5C	100	98.148	ENSEASG00005009281	RAB5C	100	98.148	Equus_asinus_asinus
ENSTTRG00000006673	RAB5C	100	98.611	ENSECAG00000025054	RAB5C	100	98.611	Equus_caballus
ENSTTRG00000006673	RAB5C	100	98.148	ENSEEUG00000002790	RAB5C	100	98.148	Erinaceus_europaeus
ENSTTRG00000006673	RAB5C	99	87.037	ENSELUG00000018516	rab5c	99	89.352	Esox_lucius
ENSTTRG00000006673	RAB5C	99	87.500	ENSELUG00000010439	-	98	87.500	Esox_lucius
ENSTTRG00000006673	RAB5C	100	99.074	ENSFCAG00000002148	RAB5C	100	99.074	Felis_catus
ENSTTRG00000006673	RAB5C	100	95.370	ENSFDAG00000021541	RAB5C	100	95.370	Fukomys_damarensis
ENSTTRG00000006673	RAB5C	99	88.426	ENSFHEG00000012117	rab5c	98	90.278	Fundulus_heteroclitus
ENSTTRG00000006673	RAB5C	99	90.323	ENSFHEG00000015268	-	99	90.323	Fundulus_heteroclitus
ENSTTRG00000006673	RAB5C	99	87.037	ENSGMOG00000015096	rab5c	98	89.352	Gadus_morhua
ENSTTRG00000006673	RAB5C	80	86.628	ENSGMOG00000001876	-	99	86.628	Gadus_morhua
ENSTTRG00000006673	RAB5C	99	88.889	ENSGAFG00000000884	rab5c	98	90.741	Gambusia_affinis
ENSTTRG00000006673	RAB5C	96	90.476	ENSGAFG00000003642	-	99	87.330	Gambusia_affinis
ENSTTRG00000006673	RAB5C	87	94.149	ENSGACG00000008659	rab5c	99	85.714	Gasterosteus_aculeatus
ENSTTRG00000006673	RAB5C	100	98.148	ENSGGOG00000005472	RAB5C	100	98.148	Gorilla_gorilla
ENSTTRG00000006673	RAB5C	99	87.037	ENSHBUG00000002014	rab5c	98	89.352	Haplochromis_burtoni
ENSTTRG00000006673	RAB5C	96	89.100	ENSHBUG00000006823	-	99	88.584	Haplochromis_burtoni
ENSTTRG00000006673	RAB5C	100	95.833	ENSHGLG00000012067	RAB5C	100	95.833	Heterocephalus_glaber_female
ENSTTRG00000006673	RAB5C	99	88.479	ENSHCOG00000004662	rab5c	97	90.323	Hippocampus_comes
ENSTTRG00000006673	RAB5C	97	81.132	ENSHCOG00000020238	-	100	79.545	Hippocampus_comes
ENSTTRG00000006673	RAB5C	96	86.667	ENSIPUG00000020082	rab5c	98	87.615	Ictalurus_punctatus
ENSTTRG00000006673	RAB5C	100	96.759	ENSSTOG00000006620	RAB5C	100	96.759	Ictidomys_tridecemlineatus
ENSTTRG00000006673	RAB5C	100	99.074	ENSJJAG00000021181	Rab5c	100	99.074	Jaculus_jaculus
ENSTTRG00000006673	RAB5C	99	87.558	ENSKMAG00000017417	-	99	87.558	Kryptolebias_marmoratus
ENSTTRG00000006673	RAB5C	99	87.963	ENSKMAG00000020038	rab5c	98	90.278	Kryptolebias_marmoratus
ENSTTRG00000006673	RAB5C	100	87.156	ENSLBEG00000010408	-	99	87.156	Labrus_bergylta
ENSTTRG00000006673	RAB5C	99	89.352	ENSLBEG00000004128	rab5c	98	91.204	Labrus_bergylta
ENSTTRG00000006673	RAB5C	99	92.056	ENSLOCG00000012566	rab5c	100	92.056	Lepisosteus_oculatus
ENSTTRG00000006673	RAB5C	100	98.148	ENSMFAG00000039627	RAB5C	100	98.148	Macaca_fascicularis
ENSTTRG00000006673	RAB5C	100	98.148	ENSMNEG00000000355	RAB5C	100	98.148	Macaca_nemestrina
ENSTTRG00000006673	RAB5C	99	87.558	ENSMAMG00000016207	-	99	87.558	Mastacembelus_armatus
ENSTTRG00000006673	RAB5C	99	87.500	ENSMAMG00000022322	rab5c	98	89.815	Mastacembelus_armatus
ENSTTRG00000006673	RAB5C	99	87.037	ENSMZEG00005022735	rab5c	98	89.352	Maylandia_zebra
ENSTTRG00000006673	RAB5C	96	89.100	ENSMZEG00005021090	-	99	88.584	Maylandia_zebra
ENSTTRG00000006673	RAB5C	100	98.148	ENSMAUG00000015005	Rab5c	100	98.148	Mesocricetus_auratus
ENSTTRG00000006673	RAB5C	100	98.148	ENSMICG00000041608	RAB5C	100	98.148	Microcebus_murinus
ENSTTRG00000006673	RAB5C	100	97.685	ENSMOCG00000018531	-	100	97.685	Microtus_ochrogaster
ENSTTRG00000006673	RAB5C	100	89.450	ENSMMOG00000020621	rab5c	99	89.450	Mola_mola
ENSTTRG00000006673	RAB5C	97	84.360	ENSMALG00000006052	rab5c	96	84.186	Monopterus_albus
ENSTTRG00000006673	RAB5C	99	86.697	ENSMALG00000022348	-	99	86.697	Monopterus_albus
ENSTTRG00000006673	RAB5C	100	97.685	MGP_CAROLIEiJ_G0017184	Rab5c	100	97.685	Mus_caroli
ENSTTRG00000006673	RAB5C	100	97.685	ENSMUSG00000019173	Rab5c	100	97.685	Mus_musculus
ENSTTRG00000006673	RAB5C	100	97.685	MGP_PahariEiJ_G0018314	Rab5c	100	97.685	Mus_pahari
ENSTTRG00000006673	RAB5C	100	97.685	MGP_SPRETEiJ_G0018027	Rab5c	100	97.685	Mus_spretus
ENSTTRG00000006673	RAB5C	100	98.148	ENSMPUG00000010554	RAB5C	100	98.148	Mustela_putorius_furo
ENSTTRG00000006673	RAB5C	100	97.222	ENSNGAG00000010286	Rab5c	100	97.222	Nannospalax_galili
ENSTTRG00000006673	RAB5C	99	87.963	ENSNBRG00000018165	rab5c	98	90.278	Neolamprologus_brichardi
ENSTTRG00000006673	RAB5C	96	89.100	ENSNBRG00000016922	-	99	88.584	Neolamprologus_brichardi
ENSTTRG00000006673	RAB5C	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSTTRG00000006673	RAB5C	100	96.296	ENSODEG00000017920	RAB5C	100	96.296	Octodon_degus
ENSTTRG00000006673	RAB5C	99	87.963	ENSONIG00000001113	rab5c	98	90.278	Oreochromis_niloticus
ENSTTRG00000006673	RAB5C	100	87.615	ENSORLG00000003882	rab5c	100	89.450	Oryzias_latipes
ENSTTRG00000006673	RAB5C	100	88.991	ENSORLG00020008388	rab5c	100	88.991	Oryzias_latipes_hni
ENSTTRG00000006673	RAB5C	100	87.615	ENSORLG00015021900	rab5c	100	89.450	Oryzias_latipes_hsok
ENSTTRG00000006673	RAB5C	100	87.615	ENSOMEG00000023078	rab5c	100	89.450	Oryzias_melastigma
ENSTTRG00000006673	RAB5C	100	98.148	ENSOGAG00000009456	RAB5C	100	98.148	Otolemur_garnettii
ENSTTRG00000006673	RAB5C	100	99.074	ENSOARG00000018768	RAB5C	100	99.074	Ovis_aries
ENSTTRG00000006673	RAB5C	100	98.148	ENSPPAG00000037206	RAB5C	100	98.148	Pan_paniscus
ENSTTRG00000006673	RAB5C	100	99.074	ENSPPRG00000005745	RAB5C	100	99.074	Panthera_pardus
ENSTTRG00000006673	RAB5C	100	99.074	ENSPTIG00000008177	RAB5C	100	99.074	Panthera_tigris_altaica
ENSTTRG00000006673	RAB5C	100	98.148	ENSPTRG00000009194	RAB5C	100	98.148	Pan_troglodytes
ENSTTRG00000006673	RAB5C	99	87.500	ENSPKIG00000020112	-	99	87.500	Paramormyrops_kingsleyae
ENSTTRG00000006673	RAB5C	99	88.372	ENSPKIG00000001237	-	99	88.372	Paramormyrops_kingsleyae
ENSTTRG00000006673	RAB5C	99	85.185	ENSPMGG00000010792	rab5c	97	89.100	Periophthalmus_magnuspinnatus
ENSTTRG00000006673	RAB5C	100	97.685	ENSPEMG00000017971	Rab5c	100	97.685	Peromyscus_maniculatus_bairdii
ENSTTRG00000006673	RAB5C	99	80.000	ENSPMAG00000001399	rab5c	100	80.000	Petromyzon_marinus
ENSTTRG00000006673	RAB5C	99	78.378	ENSPMAG00000000008	rab5c	100	78.378	Petromyzon_marinus
ENSTTRG00000006673	RAB5C	99	79.439	ENSPMAG00000007867	rab5c	99	79.439	Petromyzon_marinus
ENSTTRG00000006673	RAB5C	100	96.296	ENSPCIG00000020225	-	100	96.296	Phascolarctos_cinereus
ENSTTRG00000006673	RAB5C	99	89.401	ENSPLAG00000016333	-	99	89.401	Poecilia_latipinna
ENSTTRG00000006673	RAB5C	99	88.889	ENSPLAG00000004790	rab5c	98	90.741	Poecilia_latipinna
ENSTTRG00000006673	RAB5C	99	88.889	ENSPMEG00000011336	rab5c	98	90.741	Poecilia_mexicana
ENSTTRG00000006673	RAB5C	98	88.263	ENSPMEG00000012614	-	99	87.330	Poecilia_mexicana
ENSTTRG00000006673	RAB5C	99	88.889	ENSPREG00000010146	rab5c	98	90.741	Poecilia_reticulata
ENSTTRG00000006673	RAB5C	87	92.063	ENSPREG00000022167	-	89	93.443	Poecilia_reticulata
ENSTTRG00000006673	RAB5C	100	98.148	ENSPPYG00000008398	RAB5C	100	98.148	Pongo_abelii
ENSTTRG00000006673	RAB5C	100	97.222	ENSPCAG00000016412	RAB5C	100	97.222	Procavia_capensis
ENSTTRG00000006673	RAB5C	100	97.222	ENSPCOG00000026327	RAB5C	100	97.222	Propithecus_coquereli
ENSTTRG00000006673	RAB5C	100	98.611	ENSPVAG00000003867	RAB5C	100	98.611	Pteropus_vampyrus
ENSTTRG00000006673	RAB5C	99	87.037	ENSPNYG00000010615	rab5c	98	89.352	Pundamilia_nyererei
ENSTTRG00000006673	RAB5C	96	89.100	ENSPNYG00000015851	-	99	88.584	Pundamilia_nyererei
ENSTTRG00000006673	RAB5C	97	86.321	ENSPNAG00000002218	-	99	88.208	Pygocentrus_nattereri
ENSTTRG00000006673	RAB5C	99	89.908	ENSPNAG00000028138	rab5c	99	89.908	Pygocentrus_nattereri
ENSTTRG00000006673	RAB5C	100	98.148	ENSRNOG00000018568	Rab5c	100	98.148	Rattus_norvegicus
ENSTTRG00000006673	RAB5C	100	98.148	ENSRBIG00000031376	RAB5C	100	98.148	Rhinopithecus_bieti
ENSTTRG00000006673	RAB5C	100	98.148	ENSRROG00000032895	RAB5C	100	98.148	Rhinopithecus_roxellana
ENSTTRG00000006673	RAB5C	100	97.685	ENSSBOG00000032552	-	100	97.685	Saimiri_boliviensis_boliviensis
ENSTTRG00000006673	RAB5C	100	96.759	ENSSHAG00000005267	-	100	96.759	Sarcophilus_harrisii
ENSTTRG00000006673	RAB5C	99	86.636	ENSSFOG00015009988	-	99	86.636	Scleropages_formosus
ENSTTRG00000006673	RAB5C	96	91.346	ENSSMAG00000007323	rab5c	98	89.352	Scophthalmus_maximus
ENSTTRG00000006673	RAB5C	99	90.741	ENSSDUG00000023008	rab5c	98	90.741	Seriola_dumerili
ENSTTRG00000006673	RAB5C	99	90.278	ENSSLDG00000017771	rab5c	98	90.278	Seriola_lalandi_dorsalis
ENSTTRG00000006673	RAB5C	100	94.907	ENSSPUG00000012950	-	100	94.907	Sphenodon_punctatus
ENSTTRG00000006673	RAB5C	99	88.889	ENSSPAG00000006436	rab5c	98	91.204	Stegastes_partitus
ENSTTRG00000006673	RAB5C	100	99.074	ENSSSCG00000032467	RAB5C	100	99.074	Sus_scrofa
ENSTTRG00000006673	RAB5C	99	87.500	ENSTRUG00000015590	rab5c	98	89.352	Takifugu_rubripes
ENSTTRG00000006673	RAB5C	96	90.431	ENSTNIG00000011711	rab5c	95	90.431	Tetraodon_nigroviridis
ENSTTRG00000006673	RAB5C	100	98.148	ENSTBEG00000007092	RAB5C	100	98.148	Tupaia_belangeri
ENSTTRG00000006673	RAB5C	100	98.148	ENSUAMG00000024343	RAB5C	100	98.148	Ursus_americanus
ENSTTRG00000006673	RAB5C	100	98.148	ENSUMAG00000023270	RAB5C	100	98.148	Ursus_maritimus
ENSTTRG00000006673	RAB5C	99	88.426	ENSXCOG00000016788	rab5c	98	90.741	Xiphophorus_couchianus
ENSTTRG00000006673	RAB5C	96	90.952	ENSXCOG00000006300	-	99	87.387	Xiphophorus_couchianus
ENSTTRG00000006673	RAB5C	99	89.862	ENSXMAG00000022179	-	99	89.862	Xiphophorus_maculatus
ENSTTRG00000006673	RAB5C	99	88.889	ENSXMAG00000003266	rab5c	98	90.741	Xiphophorus_maculatus