EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000006869 (Gene tree)
Gene ID: -
Gene Symbol: PRPF8
Alias: PRPC8|Prp8|RP13|SNRNP220|hPrp8
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 36051 bases
Position: chrGeneScaffold_3352:169269-205319
Accession: 17340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000006495	RRM_4	PF10598.9	1.9e-48	1	1
ENSTTRP00000006495	U5_2-snRNA_bdg	PF10597.9	3.6e-74	1	1
ENSTTRP00000006495	PRO8NT	PF08082.11	7.5e-87	1	1
ENSTTRP00000006495	U6-snRNA_bdg	PF10596.9	9e-90	1	1
ENSTTRP00000006495	PROCN	PF08083.11	3.1e-235	1	1
ENSTTRP00000006495	PRP8_domainIV	PF12134.8	1.9e-130	1	1
ENSTTRP00000006495	PROCT	PF08084.11	7.7e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000006869	PRPF8-201	7008	-	ENSTTRP00000006495	2335 (aa)	-	UPI00018B6B45

Gene Model

Click here to download ENSTTRG00000006869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000006869's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000006869	PRPF8	100	99.400	ENSG00000174231	PRPF8	100	99.400	Homo_sapiens
ENSTTRG00000006869	PRPF8	100	97.221	ENSAPOG00000010079	prpf8	100	97.221	Acanthochromis_polyacanthus
ENSTTRG00000006869	PRPF8	100	99.400	ENSAMEG00000007940	PRPF8	100	99.400	Ailuropoda_melanoleuca
ENSTTRG00000006869	PRPF8	100	94.998	ENSACIG00000018280	prpf8	100	95.374	Amphilophus_citrinellus
ENSTTRG00000006869	PRPF8	100	97.221	ENSAOCG00000010725	prpf8	100	97.221	Amphiprion_ocellaris
ENSTTRG00000006869	PRPF8	100	97.221	ENSAPEG00000014397	prpf8	100	97.221	Amphiprion_percula
ENSTTRG00000006869	PRPF8	100	96.664	ENSATEG00000010062	prpf8	100	96.664	Anabas_testudineus
ENSTTRG00000006869	PRPF8	96	98.932	ENSAPLG00000010357	PRPF8	100	98.932	Anas_platyrhynchos
ENSTTRG00000006869	PRPF8	83	96.756	ENSACAG00000014784	PRPF8	99	96.756	Anolis_carolinensis
ENSTTRG00000006869	PRPF8	100	99.400	ENSANAG00000032629	PRPF8	100	99.400	Aotus_nancymaae
ENSTTRG00000006869	PRPF8	100	96.894	ENSACLG00000020858	prpf8	100	96.894	Astatotilapia_calliptera
ENSTTRG00000006869	PRPF8	100	97.132	ENSAMXG00000020291	prpf8	100	97.132	Astyanax_mexicanus
ENSTTRG00000006869	PRPF8	100	99.400	ENSBTAG00000011488	PRPF8	100	99.400	Bos_taurus
ENSTTRG00000006869	PRPF8	99	85.886	WBGene00004187	prp-8	99	85.972	Caenorhabditis_elegans
ENSTTRG00000006869	PRPF8	100	99.400	ENSCJAG00000001911	PRPF8	100	99.400	Callithrix_jacchus
ENSTTRG00000006869	PRPF8	100	99.400	ENSCAFG00000019221	PRPF8	100	99.400	Canis_familiaris
ENSTTRG00000006869	PRPF8	96	99.375	ENSCAFG00020009943	PRPF8	100	99.375	Canis_lupus_dingo
ENSTTRG00000006869	PRPF8	100	99.400	ENSCHIG00000017499	PRPF8	100	99.400	Capra_hircus
ENSTTRG00000006869	PRPF8	100	99.400	ENSTSYG00000014120	PRPF8	100	99.400	Carlito_syrichta
ENSTTRG00000006869	PRPF8	96	97.149	ENSCAPG00000009459	PRPF8	99	97.149	Cavia_aperea
ENSTTRG00000006869	PRPF8	100	99.400	ENSCPOG00000010379	PRPF8	100	99.400	Cavia_porcellus
ENSTTRG00000006869	PRPF8	100	99.400	ENSCCAG00000031983	-	100	99.400	Cebus_capucinus
ENSTTRG00000006869	PRPF8	100	99.400	ENSCATG00000038595	PRPF8	100	99.400	Cercocebus_atys
ENSTTRG00000006869	PRPF8	100	99.400	ENSCLAG00000004388	PRPF8	100	99.400	Chinchilla_lanigera
ENSTTRG00000006869	PRPF8	100	99.400	ENSCSAG00000013929	PRPF8	100	99.400	Chlorocebus_sabaeus
ENSTTRG00000006869	PRPF8	81	99.738	ENSCHOG00000008590	PRPF8	88	99.738	Choloepus_hoffmanni
ENSTTRG00000006869	PRPF8	100	98.929	ENSCPBG00000020409	PRPF8	100	98.929	Chrysemys_picta_bellii
ENSTTRG00000006869	PRPF8	99	92.637	ENSCSAVG00000007825	-	100	90.722	Ciona_savignyi
ENSTTRG00000006869	PRPF8	100	99.400	ENSCANG00000043088	PRPF8	100	99.400	Colobus_angolensis_palliatus
ENSTTRG00000006869	PRPF8	74	99.065	ENSCGRG00000005129	Prpf8	100	99.065	Cricetulus_griseus_crigri
ENSTTRG00000006869	PRPF8	100	97.050	ENSCSEG00000007905	prpf8	100	97.050	Cynoglossus_semilaevis
ENSTTRG00000006869	PRPF8	100	97.054	ENSDARG00000026180	prpf8	100	97.054	Danio_rerio
ENSTTRG00000006869	PRPF8	93	99.309	ENSDNOG00000018471	PRPF8	99	99.309	Dasypus_novemcinctus
ENSTTRG00000006869	PRPF8	84	99.290	ENSDORG00000006185	Prpf8	96	99.290	Dipodomys_ordii
ENSTTRG00000006869	PRPF8	99	91.034	FBgn0033688	Prp8	98	90.610	Drosophila_melanogaster
ENSTTRG00000006869	PRPF8	100	94.004	ENSETEG00000017592	PRPF8	100	94.004	Echinops_telfairi
ENSTTRG00000006869	PRPF8	99	93.834	ENSEBUG00000006548	prpf8	99	93.170	Eptatretus_burgeri
ENSTTRG00000006869	PRPF8	100	99.400	ENSEASG00005009514	PRPF8	100	99.400	Equus_asinus_asinus
ENSTTRG00000006869	PRPF8	97	99.385	ENSECAG00000021318	PRPF8	100	99.385	Equus_caballus
ENSTTRG00000006869	PRPF8	67	100.000	ENSEEUG00000012120	-	67	100.000	Erinaceus_europaeus
ENSTTRG00000006869	PRPF8	98	96.023	ENSELUG00000007120	prpf8	99	96.023	Esox_lucius
ENSTTRG00000006869	PRPF8	100	99.400	ENSFCAG00000006297	PRPF8	100	99.400	Felis_catus
ENSTTRG00000006869	PRPF8	100	98.887	ENSFALG00000006628	PRPF8	100	98.887	Ficedula_albicollis
ENSTTRG00000006869	PRPF8	100	99.400	ENSFDAG00000004711	PRPF8	100	99.400	Fukomys_damarensis
ENSTTRG00000006869	PRPF8	100	96.840	ENSFHEG00000021084	prpf8	100	96.840	Fundulus_heteroclitus
ENSTTRG00000006869	PRPF8	99	95.220	ENSGMOG00000002028	prpf8	99	94.839	Gadus_morhua
ENSTTRG00000006869	PRPF8	100	98.844	ENSGALG00000002943	PRPF8	100	98.844	Gallus_gallus
ENSTTRG00000006869	PRPF8	99	96.922	ENSGAFG00000010337	prpf8	99	96.922	Gambusia_affinis
ENSTTRG00000006869	PRPF8	100	96.916	ENSGACG00000008504	prpf8	100	96.916	Gasterosteus_aculeatus
ENSTTRG00000006869	PRPF8	100	98.929	ENSGAGG00000008350	PRPF8	100	98.929	Gopherus_agassizii
ENSTTRG00000006869	PRPF8	100	99.400	ENSGGOG00000005516	PRPF8	100	99.400	Gorilla_gorilla
ENSTTRG00000006869	PRPF8	100	97.047	ENSHBUG00000016192	prpf8	100	97.047	Haplochromis_burtoni
ENSTTRG00000006869	PRPF8	100	99.400	ENSHGLG00000012029	PRPF8	100	99.400	Heterocephalus_glaber_female
ENSTTRG00000006869	PRPF8	100	99.400	ENSHGLG00100016494	PRPF8	100	99.400	Heterocephalus_glaber_male
ENSTTRG00000006869	PRPF8	100	97.007	ENSHCOG00000016414	prpf8	100	97.007	Hippocampus_comes
ENSTTRG00000006869	PRPF8	100	97.006	ENSIPUG00000023230	prpf8	100	97.006	Ictalurus_punctatus
ENSTTRG00000006869	PRPF8	100	99.400	ENSSTOG00000005128	PRPF8	100	99.400	Ictidomys_tridecemlineatus
ENSTTRG00000006869	PRPF8	100	97.216	ENSJJAG00000021159	Prpf8	100	97.216	Jaculus_jaculus
ENSTTRG00000006869	PRPF8	99	97.417	ENSKMAG00000016118	prpf8	99	97.417	Kryptolebias_marmoratus
ENSTTRG00000006869	PRPF8	100	96.922	ENSLBEG00000026903	prpf8	100	96.922	Labrus_bergylta
ENSTTRG00000006869	PRPF8	95	95.485	ENSLACG00000010479	PRPF8	99	97.923	Latimeria_chalumnae
ENSTTRG00000006869	PRPF8	99	97.217	ENSLOCG00000005409	prpf8	99	97.217	Lepisosteus_oculatus
ENSTTRG00000006869	PRPF8	100	99.400	ENSLAFG00000015445	PRPF8	100	99.400	Loxodonta_africana
ENSTTRG00000006869	PRPF8	100	99.400	ENSMFAG00000039995	PRPF8	100	99.400	Macaca_fascicularis
ENSTTRG00000006869	PRPF8	100	99.400	ENSMMUG00000004820	PRPF8	100	99.400	Macaca_mulatta
ENSTTRG00000006869	PRPF8	100	99.400	ENSMNEG00000035713	PRPF8	100	99.400	Macaca_nemestrina
ENSTTRG00000006869	PRPF8	100	99.400	ENSMLEG00000037937	PRPF8	100	99.400	Mandrillus_leucophaeus
ENSTTRG00000006869	PRPF8	100	97.177	ENSMAMG00000008919	prpf8	100	97.177	Mastacembelus_armatus
ENSTTRG00000006869	PRPF8	100	96.894	ENSMZEG00005015073	prpf8	100	96.894	Maylandia_zebra
ENSTTRG00000006869	PRPF8	100	98.844	ENSMGAG00000004769	PRPF8	100	98.844	Meleagris_gallopavo
ENSTTRG00000006869	PRPF8	100	99.358	ENSMICG00000010320	PRPF8	100	99.358	Microcebus_murinus
ENSTTRG00000006869	PRPF8	100	99.358	ENSMOCG00000016838	Prpf8	100	99.358	Microtus_ochrogaster
ENSTTRG00000006869	PRPF8	100	96.749	ENSMMOG00000011887	prpf8	100	96.749	Mola_mola
ENSTTRG00000006869	PRPF8	100	99.229	ENSMODG00000010480	PRPF8	100	99.229	Monodelphis_domestica
ENSTTRG00000006869	PRPF8	97	96.615	ENSMALG00000003558	prpf8	100	96.615	Monopterus_albus
ENSTTRG00000006869	PRPF8	100	99.315	MGP_CAROLIEiJ_G0016740	Prpf8	100	99.315	Mus_caroli
ENSTTRG00000006869	PRPF8	100	99.315	ENSMUSG00000020850	Prpf8	100	99.315	Mus_musculus
ENSTTRG00000006869	PRPF8	100	99.229	MGP_PahariEiJ_G0017877	Prpf8	100	99.229	Mus_pahari
ENSTTRG00000006869	PRPF8	100	99.315	MGP_SPRETEiJ_G0017583	Prpf8	100	99.315	Mus_spretus
ENSTTRG00000006869	PRPF8	100	99.400	ENSMPUG00000013227	PRPF8	100	99.400	Mustela_putorius_furo
ENSTTRG00000006869	PRPF8	100	99.187	ENSMLUG00000002666	PRPF8	100	99.187	Myotis_lucifugus
ENSTTRG00000006869	PRPF8	100	97.602	ENSNGAG00000005305	Prpf8	100	97.602	Nannospalax_galili
ENSTTRG00000006869	PRPF8	100	96.936	ENSNBRG00000013127	prpf8	100	96.936	Neolamprologus_brichardi
ENSTTRG00000006869	PRPF8	97	96.947	ENSNLEG00000000897	PRPF8	98	96.947	Nomascus_leucogenys
ENSTTRG00000006869	PRPF8	99	97.436	ENSMEUG00000015999	PRPF8	100	97.436	Notamacropus_eugenii
ENSTTRG00000006869	PRPF8	100	97.859	ENSOPRG00000003102	PRPF8	100	97.859	Ochotona_princeps
ENSTTRG00000006869	PRPF8	100	99.400	ENSODEG00000008468	PRPF8	100	99.400	Octodon_degus
ENSTTRG00000006869	PRPF8	100	96.937	ENSONIG00000008153	prpf8	100	96.937	Oreochromis_niloticus
ENSTTRG00000006869	PRPF8	82	99.408	ENSOANG00000004250	PRPF8	97	99.408	Ornithorhynchus_anatinus
ENSTTRG00000006869	PRPF8	100	99.400	ENSOCUG00000000081	PRPF8	100	99.400	Oryctolagus_cuniculus
ENSTTRG00000006869	PRPF8	99	97.088	ENSORLG00000008036	prpf8	99	97.088	Oryzias_latipes
ENSTTRG00000006869	PRPF8	99	97.046	ENSORLG00020021070	prpf8	99	97.046	Oryzias_latipes_hni
ENSTTRG00000006869	PRPF8	99	97.088	ENSORLG00015002340	prpf8	99	97.088	Oryzias_latipes_hsok
ENSTTRG00000006869	PRPF8	99	95.587	ENSOMEG00000016866	prpf8	99	95.587	Oryzias_melastigma
ENSTTRG00000006869	PRPF8	100	99.273	ENSOARG00000013312	PRPF8	100	99.273	Ovis_aries
ENSTTRG00000006869	PRPF8	100	99.400	ENSPPAG00000042753	PRPF8	100	99.400	Pan_paniscus
ENSTTRG00000006869	PRPF8	100	99.400	ENSPPRG00000008746	PRPF8	100	99.400	Panthera_pardus
ENSTTRG00000006869	PRPF8	100	99.315	ENSPTIG00000019200	PRPF8	100	99.315	Panthera_tigris_altaica
ENSTTRG00000006869	PRPF8	100	99.400	ENSPTRG00000039576	PRPF8	100	99.400	Pan_troglodytes
ENSTTRG00000006869	PRPF8	99	98.456	ENSPANG00000024607	PRPF8	99	98.456	Papio_anubis
ENSTTRG00000006869	PRPF8	100	96.766	ENSPKIG00000011201	prpf8	100	96.766	Paramormyrops_kingsleyae
ENSTTRG00000006869	PRPF8	100	98.887	ENSPSIG00000013393	PRPF8	100	98.887	Pelodiscus_sinensis
ENSTTRG00000006869	PRPF8	100	99.358	ENSPEMG00000021699	Prpf8	100	99.358	Peromyscus_maniculatus_bairdii
ENSTTRG00000006869	PRPF8	96	93.586	ENSPMAG00000005438	prpf8	100	93.630	Petromyzon_marinus
ENSTTRG00000006869	PRPF8	100	99.229	ENSPCIG00000022603	PRPF8	100	99.241	Phascolarctos_cinereus
ENSTTRG00000006869	PRPF8	100	96.397	ENSPFOG00000007005	prpf8	100	96.397	Poecilia_formosa
ENSTTRG00000006869	PRPF8	100	95.760	ENSPLAG00000020777	prpf8	100	95.803	Poecilia_latipinna
ENSTTRG00000006869	PRPF8	100	96.397	ENSPMEG00000004051	prpf8	100	96.397	Poecilia_mexicana
ENSTTRG00000006869	PRPF8	100	97.045	ENSPREG00000021902	prpf8	100	97.045	Poecilia_reticulata
ENSTTRG00000006869	PRPF8	100	99.400	ENSPPYG00000007777	PRPF8	100	99.400	Pongo_abelii
ENSTTRG00000006869	PRPF8	90	99.505	ENSPCAG00000008938	PRPF8	90	99.505	Procavia_capensis
ENSTTRG00000006869	PRPF8	100	99.358	ENSPCOG00000015182	PRPF8	100	99.358	Propithecus_coquereli
ENSTTRG00000006869	PRPF8	93	100.000	ENSPVAG00000002134	PRPF8	93	100.000	Pteropus_vampyrus
ENSTTRG00000006869	PRPF8	100	97.047	ENSPNYG00000016356	prpf8	100	97.047	Pundamilia_nyererei
ENSTTRG00000006869	PRPF8	100	97.049	ENSPNAG00000009247	prpf8	100	97.049	Pygocentrus_nattereri
ENSTTRG00000006869	PRPF8	100	99.315	ENSRNOG00000003495	Prpf8	100	99.315	Rattus_norvegicus
ENSTTRG00000006869	PRPF8	100	99.400	ENSRBIG00000031219	PRPF8	100	99.400	Rhinopithecus_bieti
ENSTTRG00000006869	PRPF8	100	99.400	ENSRROG00000038014	PRPF8	100	99.400	Rhinopithecus_roxellana
ENSTTRG00000006869	PRPF8	99	62.042	YHR165C	PRP8	95	62.085	Saccharomyces_cerevisiae
ENSTTRG00000006869	PRPF8	100	99.400	ENSSBOG00000029717	PRPF8	100	99.400	Saimiri_boliviensis_boliviensis
ENSTTRG00000006869	PRPF8	100	99.186	ENSSHAG00000006167	PRPF8	100	99.186	Sarcophilus_harrisii
ENSTTRG00000006869	PRPF8	100	96.926	ENSSFOG00015013905	prpf8	100	96.926	Scleropages_formosus
ENSTTRG00000006869	PRPF8	100	96.796	ENSSMAG00000017736	prpf8	100	96.796	Scophthalmus_maximus
ENSTTRG00000006869	PRPF8	100	97.177	ENSSDUG00000003029	prpf8	100	97.177	Seriola_dumerili
ENSTTRG00000006869	PRPF8	68	98.185	ENSSLDG00000017096	prpf8	100	98.185	Seriola_lalandi_dorsalis
ENSTTRG00000006869	PRPF8	87	99.092	ENSSARG00000002892	PRPF8	87	99.092	Sorex_araneus
ENSTTRG00000006869	PRPF8	100	98.715	ENSSPUG00000007463	PRPF8	100	98.715	Sphenodon_punctatus
ENSTTRG00000006869	PRPF8	100	96.622	ENSSPAG00000015639	prpf8	100	96.622	Stegastes_partitus
ENSTTRG00000006869	PRPF8	100	99.400	ENSSSCG00000017817	PRPF8	100	99.400	Sus_scrofa
ENSTTRG00000006869	PRPF8	100	98.887	ENSTGUG00000005648	-	100	98.887	Taeniopygia_guttata
ENSTTRG00000006869	PRPF8	52	99.651	ENSTGUG00000015597	-	95	99.651	Taeniopygia_guttata
ENSTTRG00000006869	PRPF8	100	96.965	ENSTRUG00000015906	prpf8	100	96.965	Takifugu_rubripes
ENSTTRG00000006869	PRPF8	95	98.029	ENSTNIG00000003460	prpf8	99	98.029	Tetraodon_nigroviridis
ENSTTRG00000006869	PRPF8	93	98.979	ENSTBEG00000006431	PRPF8	93	98.979	Tupaia_belangeri
ENSTTRG00000006869	PRPF8	54	99.762	ENSUAMG00000015644	-	96	99.762	Ursus_americanus
ENSTTRG00000006869	PRPF8	100	99.143	ENSUMAG00000009385	PRPF8	100	99.143	Ursus_maritimus
ENSTTRG00000006869	PRPF8	71	99.505	ENSVPAG00000006063	-	71	99.505	Vicugna_pacos
ENSTTRG00000006869	PRPF8	100	99.400	ENSVVUG00000021695	PRPF8	99	99.400	Vulpes_vulpes
ENSTTRG00000006869	PRPF8	100	98.159	ENSXETG00000022259	prpf8	100	98.159	Xenopus_tropicalis
ENSTTRG00000006869	PRPF8	100	96.968	ENSXCOG00000012775	prpf8	100	96.968	Xiphophorus_couchianus
ENSTTRG00000006869	PRPF8	100	96.926	ENSXMAG00000008505	prpf8	100	96.926	Xiphophorus_maculatus