EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000007310 (Gene tree)
Gene ID: -
Gene Symbol: SRSF1
Alias: -
Full Name: serine and arginine rich splicing factor 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 1117 bases
Position: chrscaffold_103041:51435-52551
Accession: 10780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000006916	RRM_1	PF00076.22	6.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000007309	SRSF1-201	552	-	ENSTTRP00000006916	183 (aa)	-	UPI00017A29B4

Gene Model

Click here to download ENSTTRG00000007310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000007310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000007310	SRSF1	69	70.866	ENSTTRG00000000145	SRSF9	60	70.866

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000007310	SRSF1	100	100.000	ENSG00000136450	SRSF1	99	100.000	Homo_sapiens
ENSTTRG00000007310	SRSF1	72	90.909	ENSAPOG00000002748	-	53	87.121	Acanthochromis_polyacanthus
ENSTTRG00000007310	SRSF1	72	91.304	ENSAPOG00000008542	-	55	89.130	Acanthochromis_polyacanthus
ENSTTRG00000007310	SRSF1	100	96.175	ENSAMEG00000002635	SRSF1	73	96.175	Ailuropoda_melanoleuca
ENSTTRG00000007310	SRSF1	72	90.909	ENSACIG00000008091	srsf1a	56	87.879	Amphilophus_citrinellus
ENSTTRG00000007310	SRSF1	72	91.304	ENSAOCG00000000337	-	56	89.130	Amphiprion_ocellaris
ENSTTRG00000007310	SRSF1	72	91.667	ENSAOCG00000010671	-	56	88.636	Amphiprion_ocellaris
ENSTTRG00000007310	SRSF1	72	91.667	ENSAPEG00000009915	-	56	88.636	Amphiprion_percula
ENSTTRG00000007310	SRSF1	72	91.304	ENSAPEG00000023352	-	55	89.130	Amphiprion_percula
ENSTTRG00000007310	SRSF1	72	91.667	ENSATEG00000022403	-	53	88.636	Anabas_testudineus
ENSTTRG00000007310	SRSF1	75	86.957	ENSATEG00000021567	-	54	88.636	Anabas_testudineus
ENSTTRG00000007310	SRSF1	100	98.361	ENSACAG00000005542	-	74	98.361	Anolis_carolinensis
ENSTTRG00000007310	SRSF1	100	98.907	ENSANAG00000020583	-	72	98.907	Aotus_nancymaae
ENSTTRG00000007310	SRSF1	72	77.922	ENSAMXG00000024373	-	71	76.129	Astyanax_mexicanus
ENSTTRG00000007310	SRSF1	94	89.831	ENSAMXG00000035996	srsf1a	54	91.241	Astyanax_mexicanus
ENSTTRG00000007310	SRSF1	100	100.000	ENSBTAG00000014766	SRSF1	74	100.000	Bos_taurus
ENSTTRG00000007310	SRSF1	72	92.424	ENSCJAG00000008111	-	59	92.424	Callithrix_jacchus
ENSTTRG00000007310	SRSF1	100	98.907	ENSCJAG00000041713	-	72	98.907	Callithrix_jacchus
ENSTTRG00000007310	SRSF1	100	98.907	ENSCAFG00000017430	SRSF1	72	98.907	Canis_familiaris
ENSTTRG00000007310	SRSF1	100	98.907	ENSCAFG00020025632	-	72	98.907	Canis_lupus_dingo
ENSTTRG00000007310	SRSF1	100	100.000	ENSCHIG00000010787	SRSF1	74	100.000	Capra_hircus
ENSTTRG00000007310	SRSF1	100	98.907	ENSTSYG00000013899	-	83	100.000	Carlito_syrichta
ENSTTRG00000007310	SRSF1	100	100.000	ENSCPOG00000032681	-	74	100.000	Cavia_porcellus
ENSTTRG00000007310	SRSF1	100	100.000	ENSCCAG00000029484	-	74	100.000	Cebus_capucinus
ENSTTRG00000007310	SRSF1	100	98.907	ENSCATG00000042294	-	88	98.693	Cercocebus_atys
ENSTTRG00000007310	SRSF1	100	100.000	ENSCLAG00000014707	-	74	100.000	Chinchilla_lanigera
ENSTTRG00000007310	SRSF1	100	98.361	ENSCSAG00000005642	-	72	98.361	Chlorocebus_sabaeus
ENSTTRG00000007310	SRSF1	100	100.000	ENSCHOG00000001899	SRSF1	74	100.000	Choloepus_hoffmanni
ENSTTRG00000007310	SRSF1	100	98.361	ENSCPBG00000009851	-	74	98.361	Chrysemys_picta_bellii
ENSTTRG00000007310	SRSF1	100	98.907	ENSCANG00000029726	-	83	98.693	Colobus_angolensis_palliatus
ENSTTRG00000007310	SRSF1	100	98.907	ENSCGRG00001000670	Srsf1	72	98.907	Cricetulus_griseus_chok1gshd
ENSTTRG00000007310	SRSF1	100	100.000	ENSCGRG00000005590	Srsf1	74	100.000	Cricetulus_griseus_crigri
ENSTTRG00000007310	SRSF1	72	80.952	ENSCSEG00000009973	-	56	79.592	Cynoglossus_semilaevis
ENSTTRG00000007310	SRSF1	72	90.370	ENSCSEG00000014272	-	54	90.370	Cynoglossus_semilaevis
ENSTTRG00000007310	SRSF1	72	92.481	ENSCVAG00000005458	-	60	90.909	Cyprinodon_variegatus
ENSTTRG00000007310	SRSF1	72	91.667	ENSCVAG00000018617	-	53	88.636	Cyprinodon_variegatus
ENSTTRG00000007310	SRSF1	72	86.620	ENSDARG00000057691	srsf1a	67	86.822	Danio_rerio
ENSTTRG00000007310	SRSF1	100	96.175	ENSDARG00000017843	srsf1b	74	96.175	Danio_rerio
ENSTTRG00000007310	SRSF1	100	98.907	ENSDNOG00000011737	-	72	98.907	Dasypus_novemcinctus
ENSTTRG00000007310	SRSF1	100	100.000	ENSDORG00000015082	Srsf1	74	100.000	Dipodomys_ordii
ENSTTRG00000007310	SRSF1	100	98.907	ENSEASG00005002922	-	72	98.907	Equus_asinus_asinus
ENSTTRG00000007310	SRSF1	100	100.000	ENSECAG00000016654	SRSF1	74	100.000	Equus_caballus
ENSTTRG00000007310	SRSF1	72	92.424	ENSELUG00000021646	srsf1a	52	87.121	Esox_lucius
ENSTTRG00000007310	SRSF1	100	98.907	ENSFCAG00000002250	-	72	98.907	Felis_catus
ENSTTRG00000007310	SRSF1	79	97.931	ENSFALG00000005062	-	57	97.931	Ficedula_albicollis
ENSTTRG00000007310	SRSF1	100	100.000	ENSFDAG00000010646	-	74	100.000	Fukomys_damarensis
ENSTTRG00000007310	SRSF1	72	91.667	ENSFHEG00000003174	srsf1a	56	88.636	Fundulus_heteroclitus
ENSTTRG00000007310	SRSF1	91	83.832	ENSGMOG00000014787	-	54	83.333	Gadus_morhua
ENSTTRG00000007310	SRSF1	100	98.361	ENSGALG00000005525	SRSF1	74	98.361	Gallus_gallus
ENSTTRG00000007310	SRSF1	72	84.848	ENSGACG00000020621	srsf1b	52	81.818	Gasterosteus_aculeatus
ENSTTRG00000007310	SRSF1	100	97.268	ENSGAGG00000022965	-	72	97.268	Gopherus_agassizii
ENSTTRG00000007310	SRSF1	100	98.907	ENSGGOG00000004386	SRSF1	88	98.693	Gorilla_gorilla
ENSTTRG00000007310	SRSF1	72	90.909	ENSHBUG00000016788	srsf1a	54	87.879	Haplochromis_burtoni
ENSTTRG00000007310	SRSF1	100	100.000	ENSHGLG00000000669	-	85	100.000	Heterocephalus_glaber_female
ENSTTRG00000007310	SRSF1	100	100.000	ENSHGLG00000000600	-	85	100.000	Heterocephalus_glaber_female
ENSTTRG00000007310	SRSF1	100	100.000	ENSHGLG00100016906	-	74	100.000	Heterocephalus_glaber_male
ENSTTRG00000007310	SRSF1	72	85.294	ENSHCOG00000018918	srsf1a	53	86.029	Hippocampus_comes
ENSTTRG00000007310	SRSF1	100	95.628	ENSIPUG00000008750	srsf1b	73	95.628	Ictalurus_punctatus
ENSTTRG00000007310	SRSF1	94	89.326	ENSIPUG00000017039	srsf1a	55	92.029	Ictalurus_punctatus
ENSTTRG00000007310	SRSF1	100	100.000	ENSSTOG00000000243	-	74	100.000	Ictidomys_tridecemlineatus
ENSTTRG00000007310	SRSF1	100	100.000	ENSJJAG00000000102	-	74	100.000	Jaculus_jaculus
ENSTTRG00000007310	SRSF1	72	91.667	ENSKMAG00000019232	srsf1a	53	86.364	Kryptolebias_marmoratus
ENSTTRG00000007310	SRSF1	72	90.152	ENSLBEG00000020864	-	56	87.121	Labrus_bergylta
ENSTTRG00000007310	SRSF1	72	87.407	ENSLBEG00000015294	-	54	88.889	Labrus_bergylta
ENSTTRG00000007310	SRSF1	100	96.175	ENSLOCG00000005994	srsf1a	74	96.175	Lepisosteus_oculatus
ENSTTRG00000007310	SRSF1	100	100.000	ENSLAFG00000025743	SRSF1	74	100.000	Loxodonta_africana
ENSTTRG00000007310	SRSF1	100	100.000	ENSMFAG00000040003	-	88	98.693	Macaca_fascicularis
ENSTTRG00000007310	SRSF1	100	95.628	ENSMMUG00000003260	-	72	95.628	Macaca_mulatta
ENSTTRG00000007310	SRSF1	100	98.907	ENSMMUG00000004725	SRSF1	72	98.907	Macaca_mulatta
ENSTTRG00000007310	SRSF1	100	95.628	ENSMNEG00000015983	-	88	96.732	Macaca_nemestrina
ENSTTRG00000007310	SRSF1	100	98.907	ENSMNEG00000027680	-	88	98.693	Macaca_nemestrina
ENSTTRG00000007310	SRSF1	100	92.350	ENSMLEG00000015243	-	72	92.350	Mandrillus_leucophaeus
ENSTTRG00000007310	SRSF1	100	100.000	ENSMLEG00000040509	SRSF1	74	100.000	Mandrillus_leucophaeus
ENSTTRG00000007310	SRSF1	72	91.667	ENSMAMG00000018454	-	53	88.636	Mastacembelus_armatus
ENSTTRG00000007310	SRSF1	72	90.152	ENSMAMG00000019687	-	53	87.121	Mastacembelus_armatus
ENSTTRG00000007310	SRSF1	72	94.697	ENSMAMG00000019691	-	54	90.152	Mastacembelus_armatus
ENSTTRG00000007310	SRSF1	100	100.000	ENSMAUG00000021845	Srsf1	74	100.000	Mesocricetus_auratus
ENSTTRG00000007310	SRSF1	100	98.907	ENSMICG00000013639	-	88	98.693	Microcebus_murinus
ENSTTRG00000007310	SRSF1	100	100.000	ENSMOCG00000001996	Srsf1	74	100.000	Microtus_ochrogaster
ENSTTRG00000007310	SRSF1	72	89.394	ENSMMOG00000014354	srsf1a	56	86.364	Mola_mola
ENSTTRG00000007310	SRSF1	72	90.909	ENSMALG00000017129	-	51	86.364	Monopterus_albus
ENSTTRG00000007310	SRSF1	100	100.000	MGP_CAROLIEiJ_G0016943	Srsf1	89	100.000	Mus_caroli
ENSTTRG00000007310	SRSF1	100	100.000	ENSMUSG00000018379	Srsf1	88	100.000	Mus_musculus
ENSTTRG00000007310	SRSF1	100	100.000	MGP_PahariEiJ_G0018074	Srsf1	89	100.000	Mus_pahari
ENSTTRG00000007310	SRSF1	100	100.000	MGP_SPRETEiJ_G0017790	Srsf1	89	100.000	Mus_spretus
ENSTTRG00000007310	SRSF1	100	100.000	ENSMPUG00000015369	SRSF1	74	100.000	Mustela_putorius_furo
ENSTTRG00000007310	SRSF1	100	100.000	ENSMLUG00000011040	SRSF1	74	100.000	Myotis_lucifugus
ENSTTRG00000007310	SRSF1	75	88.406	ENSMLUG00000023995	-	52	87.879	Myotis_lucifugus
ENSTTRG00000007310	SRSF1	100	100.000	ENSNGAG00000011395	Srsf1	74	100.000	Nannospalax_galili
ENSTTRG00000007310	SRSF1	100	77.596	ENSNBRG00000008041	srsf1b	52	78.030	Neolamprologus_brichardi
ENSTTRG00000007310	SRSF1	100	98.907	ENSNLEG00000008088	-	88	98.693	Nomascus_leucogenys
ENSTTRG00000007310	SRSF1	100	100.000	ENSOPRG00000001234	-	100	100.000	Ochotona_princeps
ENSTTRG00000007310	SRSF1	100	100.000	ENSODEG00000011481	-	74	100.000	Octodon_degus
ENSTTRG00000007310	SRSF1	72	90.909	ENSONIG00000013160	-	52	87.879	Oreochromis_niloticus
ENSTTRG00000007310	SRSF1	94	88.953	ENSONIG00000004860	-	54	88.636	Oreochromis_niloticus
ENSTTRG00000007310	SRSF1	100	69.519	ENSOCUG00000010894	-	51	71.538	Oryctolagus_cuniculus
ENSTTRG00000007310	SRSF1	72	91.667	ENSORLG00000004580	srsf1a	53	88.636	Oryzias_latipes
ENSTTRG00000007310	SRSF1	72	91.667	ENSORLG00020009456	srsf1a	56	88.636	Oryzias_latipes_hni
ENSTTRG00000007310	SRSF1	72	91.667	ENSORLG00015014384	srsf1a	56	88.636	Oryzias_latipes_hsok
ENSTTRG00000007310	SRSF1	72	91.667	ENSOMEG00000004106	srsf1a	53	88.636	Oryzias_melastigma
ENSTTRG00000007310	SRSF1	100	100.000	ENSOGAG00000025950	-	74	100.000	Otolemur_garnettii
ENSTTRG00000007310	SRSF1	100	93.989	ENSOARG00000008323	SRSF1	73	93.989	Ovis_aries
ENSTTRG00000007310	SRSF1	100	100.000	ENSPPAG00000043403	-	88	98.693	Pan_paniscus
ENSTTRG00000007310	SRSF1	100	100.000	ENSPPRG00000004238	-	74	100.000	Panthera_pardus
ENSTTRG00000007310	SRSF1	100	98.907	ENSPTRG00000049077	SRSF1	88	98.693	Pan_troglodytes
ENSTTRG00000007310	SRSF1	77	96.429	ENSPANG00000030275	-	76	96.899	Papio_anubis
ENSTTRG00000007310	SRSF1	100	98.907	ENSPANG00000022305	-	88	98.693	Papio_anubis
ENSTTRG00000007310	SRSF1	100	95.082	ENSPKIG00000012857	srsf1b	73	95.082	Paramormyrops_kingsleyae
ENSTTRG00000007310	SRSF1	72	91.667	ENSPKIG00000007204	srsf1a	56	89.394	Paramormyrops_kingsleyae
ENSTTRG00000007310	SRSF1	100	98.361	ENSPSIG00000009000	-	78	97.902	Pelodiscus_sinensis
ENSTTRG00000007310	SRSF1	95	86.207	ENSPMGG00000005467	-	55	84.091	Periophthalmus_magnuspinnatus
ENSTTRG00000007310	SRSF1	72	87.591	ENSPMGG00000013112	-	57	90.511	Periophthalmus_magnuspinnatus
ENSTTRG00000007310	SRSF1	100	100.000	ENSPEMG00000021416	Srsf1	74	100.000	Peromyscus_maniculatus_bairdii
ENSTTRG00000007310	SRSF1	100	98.913	ENSPCIG00000006076	-	74	98.913	Phascolarctos_cinereus
ENSTTRG00000007310	SRSF1	74	92.647	ENSPLAG00000008416	srsf1b	54	90.909	Poecilia_latipinna
ENSTTRG00000007310	SRSF1	74	92.647	ENSPMEG00000002388	-	54	90.909	Poecilia_mexicana
ENSTTRG00000007310	SRSF1	72	91.667	ENSPREG00000009667	srsf1a	53	88.636	Poecilia_reticulata
ENSTTRG00000007310	SRSF1	100	100.000	ENSPPYG00000008240	SRSF1	74	100.000	Pongo_abelii
ENSTTRG00000007310	SRSF1	100	100.000	ENSPCAG00000005199	SRSF1	74	100.000	Procavia_capensis
ENSTTRG00000007310	SRSF1	100	100.000	ENSPCOG00000023654	-	88	98.693	Propithecus_coquereli
ENSTTRG00000007310	SRSF1	73	71.533	ENSPCOG00000025736	-	62	70.992	Propithecus_coquereli
ENSTTRG00000007310	SRSF1	72	90.152	ENSPNAG00000014601	srsf1b	53	85.606	Pygocentrus_nattereri
ENSTTRG00000007310	SRSF1	94	91.860	ENSPNAG00000022241	srsf1a	53	87.121	Pygocentrus_nattereri
ENSTTRG00000007310	SRSF1	100	100.000	ENSRNOG00000050323	Srsf1	74	100.000	Rattus_norvegicus
ENSTTRG00000007310	SRSF1	100	98.907	ENSRBIG00000034445	-	88	98.693	Rhinopithecus_bieti
ENSTTRG00000007310	SRSF1	100	100.000	ENSRROG00000041506	-	88	98.693	Rhinopithecus_roxellana
ENSTTRG00000007310	SRSF1	100	100.000	ENSSBOG00000025377	-	74	100.000	Saimiri_boliviensis_boliviensis
ENSTTRG00000007310	SRSF1	100	98.913	ENSSHAG00000002552	-	74	98.913	Sarcophilus_harrisii
ENSTTRG00000007310	SRSF1	100	95.628	ENSSFOG00015004800	srsf1a	73	95.628	Scleropages_formosus
ENSTTRG00000007310	SRSF1	72	89.394	ENSSMAG00000007018	-	53	85.606	Scophthalmus_maximus
ENSTTRG00000007310	SRSF1	92	86.286	ENSSMAG00000009719	-	55	84.892	Scophthalmus_maximus
ENSTTRG00000007310	SRSF1	72	90.152	ENSSDUG00000011303	-	56	87.121	Seriola_dumerili
ENSTTRG00000007310	SRSF1	100	74.194	ENSSDUG00000003929	-	55	80.741	Seriola_dumerili
ENSTTRG00000007310	SRSF1	72	90.152	ENSSLDG00000010543	-	53	87.121	Seriola_lalandi_dorsalis
ENSTTRG00000007310	SRSF1	72	81.203	ENSSLDG00000016868	-	50	81.203	Seriola_lalandi_dorsalis
ENSTTRG00000007310	SRSF1	93	73.099	ENSSLDG00000016895	-	51	81.967	Seriola_lalandi_dorsalis
ENSTTRG00000007310	SRSF1	100	97.268	ENSSPUG00000000804	-	72	97.268	Sphenodon_punctatus
ENSTTRG00000007310	SRSF1	72	87.500	ENSSPAG00000014152	-	56	86.111	Stegastes_partitus
ENSTTRG00000007310	SRSF1	72	92.424	ENSSPAG00000022562	-	53	89.394	Stegastes_partitus
ENSTTRG00000007310	SRSF1	100	100.000	ENSSSCG00000017626	-	74	100.000	Sus_scrofa
ENSTTRG00000007310	SRSF1	100	98.361	ENSTGUG00000008416	-	99	98.361	Taeniopygia_guttata
ENSTTRG00000007310	SRSF1	72	90.152	ENSTRUG00000003691	srsf1a	53	87.121	Takifugu_rubripes
ENSTTRG00000007310	SRSF1	72	90.152	ENSTNIG00000016223	srsf1a	53	87.121	Tetraodon_nigroviridis
ENSTTRG00000007310	SRSF1	100	100.000	ENSUAMG00000009858	SRSF1	74	100.000	Ursus_americanus
ENSTTRG00000007310	SRSF1	100	98.907	ENSUMAG00000000455	-	72	98.907	Ursus_maritimus
ENSTTRG00000007310	SRSF1	100	99.454	ENSVPAG00000010094	SRSF1	74	99.454	Vicugna_pacos
ENSTTRG00000007310	SRSF1	100	98.907	ENSVVUG00000011882	-	72	98.907	Vulpes_vulpes
ENSTTRG00000007310	SRSF1	100	94.536	ENSXETG00000008954	srsf1	76	88.614	Xenopus_tropicalis
ENSTTRG00000007310	SRSF1	72	91.667	ENSXMAG00000011766	srsf1a	53	88.636	Xiphophorus_maculatus