EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000007436 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 124140 bases
Position: chrGeneScaffold_1360:33783-157922
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000007038	PUF	PF00806.19	2.4e-70	1	8
ENSTTRP00000007038	PUF	PF00806.19	2.4e-70	2	8
ENSTTRP00000007038	PUF	PF00806.19	2.4e-70	3	8
ENSTTRP00000007038	PUF	PF00806.19	2.4e-70	4	8
ENSTTRP00000007038	PUF	PF00806.19	2.4e-70	5	8
ENSTTRP00000007038	PUF	PF00806.19	2.4e-70	6	8
ENSTTRP00000007038	PUF	PF00806.19	2.4e-70	7	8
ENSTTRP00000007038	PUF	PF00806.19	2.4e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000007436	PUM1-201	3672	-	ENSTTRP00000007038	1223 (aa)	-	UPI00018B5DC2

Gene Model

Click here to download ENSTTRG00000007436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000007436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000007436	PUM1	87	76.416	ENSTTRG00000004887	PUM2	100	76.509

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000007436	PUM1	90	99.453	ENSG00000134644	PUM1	99	98.776	Homo_sapiens
ENSTTRG00000007436	PUM1	87	91.084	ENSAPOG00000021632	pum1	100	77.220	Acanthochromis_polyacanthus
ENSTTRG00000007436	PUM1	90	99.271	ENSAMEG00000017656	PUM1	92	99.271	Ailuropoda_melanoleuca
ENSTTRG00000007436	PUM1	88	77.028	ENSACIG00000021013	pum1	94	79.436	Amphilophus_citrinellus
ENSTTRG00000007436	PUM1	87	91.084	ENSAOCG00000003944	pum1	100	77.220	Amphiprion_ocellaris
ENSTTRG00000007436	PUM1	87	91.084	ENSAPEG00000014550	pum1	100	77.220	Amphiprion_percula
ENSTTRG00000007436	PUM1	87	91.084	ENSATEG00000016004	pum1	100	90.602	Anabas_testudineus
ENSTTRG00000007436	PUM1	90	97.721	ENSAPLG00000009351	PUM1	92	97.721	Anas_platyrhynchos
ENSTTRG00000007436	PUM1	89	95.856	ENSACAG00000000682	PUM1	90	95.856	Anolis_carolinensis
ENSTTRG00000007436	PUM1	90	99.088	ENSANAG00000027865	PUM1	92	99.088	Aotus_nancymaae
ENSTTRG00000007436	PUM1	87	76.645	ENSACLG00000019354	pum1	100	78.908	Astatotilapia_calliptera
ENSTTRG00000007436	PUM1	89	81.187	ENSAMXG00000020607	pum1	90	80.987	Astyanax_mexicanus
ENSTTRG00000007436	PUM1	90	99.544	ENSBTAG00000018979	PUM1	92	99.544	Bos_taurus
ENSTTRG00000007436	PUM1	90	99.271	ENSCJAG00000006035	PUM1	92	99.271	Callithrix_jacchus
ENSTTRG00000007436	PUM1	90	96.901	ENSCAFG00000011205	PUM1	92	96.901	Canis_familiaris
ENSTTRG00000007436	PUM1	89	97.270	ENSCAFG00020024616	PUM1	99	98.672	Canis_lupus_dingo
ENSTTRG00000007436	PUM1	90	99.544	ENSCHIG00000012952	PUM1	92	99.544	Capra_hircus
ENSTTRG00000007436	PUM1	90	98.997	ENSTSYG00000008868	PUM1	92	98.997	Carlito_syrichta
ENSTTRG00000007436	PUM1	90	98.906	ENSCPOG00000031613	PUM1	92	98.906	Cavia_porcellus
ENSTTRG00000007436	PUM1	90	96.989	ENSCATG00000017991	PUM1	91	99.275	Cercocebus_atys
ENSTTRG00000007436	PUM1	90	98.997	ENSCLAG00000007662	PUM1	92	98.997	Chinchilla_lanigera
ENSTTRG00000007436	PUM1	90	98.375	ENSCSAG00000001028	PUM1	92	98.375	Chlorocebus_sabaeus
ENSTTRG00000007436	PUM1	83	95.854	ENSCHOG00000010245	PUM1	85	95.854	Choloepus_hoffmanni
ENSTTRG00000007436	PUM1	90	97.901	ENSCPBG00000009288	PUM1	99	95.962	Chrysemys_picta_bellii
ENSTTRG00000007436	PUM1	90	99.453	ENSCANG00000042606	PUM1	92	99.453	Colobus_angolensis_palliatus
ENSTTRG00000007436	PUM1	90	98.540	ENSCGRG00001024949	Pum1	92	98.540	Cricetulus_griseus_chok1gshd
ENSTTRG00000007436	PUM1	90	98.540	ENSCGRG00000014197	Pum1	92	98.540	Cricetulus_griseus_crigri
ENSTTRG00000007436	PUM1	87	75.926	ENSCSEG00000015981	pum1	100	77.521	Cynoglossus_semilaevis
ENSTTRG00000007436	PUM1	88	76.299	ENSCVAG00000007043	pum1	93	78.435	Cyprinodon_variegatus
ENSTTRG00000007436	PUM1	89	81.461	ENSDARG00000099256	pum1	93	81.718	Danio_rerio
ENSTTRG00000007436	PUM1	90	98.906	ENSDNOG00000010939	PUM1	92	98.906	Dasypus_novemcinctus
ENSTTRG00000007436	PUM1	82	98.309	ENSDORG00000001875	Pum1	100	98.309	Dipodomys_ordii
ENSTTRG00000007436	PUM1	85	93.945	ENSETEG00000004355	PUM1	89	93.945	Echinops_telfairi
ENSTTRG00000007436	PUM1	90	99.179	ENSEASG00005010813	PUM1	92	99.179	Equus_asinus_asinus
ENSTTRG00000007436	PUM1	90	98.997	ENSECAG00000021369	PUM1	92	98.997	Equus_caballus
ENSTTRG00000007436	PUM1	67	100.000	ENSEEUG00000003871	PUM1	67	100.000	Erinaceus_europaeus
ENSTTRG00000007436	PUM1	88	78.681	ENSELUG00000002409	pum1	91	92.105	Esox_lucius
ENSTTRG00000007436	PUM1	90	99.544	ENSFCAG00000010374	PUM1	92	99.544	Felis_catus
ENSTTRG00000007436	PUM1	90	96.189	ENSFALG00000001214	PUM1	90	96.189	Ficedula_albicollis
ENSTTRG00000007436	PUM1	90	98.906	ENSFDAG00000011319	PUM1	92	98.906	Fukomys_damarensis
ENSTTRG00000007436	PUM1	90	97.903	ENSGALG00000042598	PUM1	92	97.903	Gallus_gallus
ENSTTRG00000007436	PUM1	87	87.356	ENSGAFG00000015617	pum1	100	81.263	Gambusia_affinis
ENSTTRG00000007436	PUM1	88	77.112	ENSGACG00000005717	pum1	93	78.344	Gasterosteus_aculeatus
ENSTTRG00000007436	PUM1	90	97.630	ENSGAGG00000001290	PUM1	99	97.386	Gopherus_agassizii
ENSTTRG00000007436	PUM1	90	99.453	ENSGGOG00000011983	PUM1	92	99.001	Gorilla_gorilla
ENSTTRG00000007436	PUM1	88	76.846	ENSHBUG00000018718	pum1	93	79.072	Haplochromis_burtoni
ENSTTRG00000007436	PUM1	90	98.815	ENSHGLG00000013819	Pum1	92	98.815	Heterocephalus_glaber_female
ENSTTRG00000007436	PUM1	90	98.815	ENSHGLG00100008621	Pum1	92	98.815	Heterocephalus_glaber_male
ENSTTRG00000007436	PUM1	89	79.564	ENSIPUG00000020421	pum1	100	75.845	Ictalurus_punctatus
ENSTTRG00000007436	PUM1	90	99.361	ENSSTOG00000010757	PUM1	92	99.361	Ictidomys_tridecemlineatus
ENSTTRG00000007436	PUM1	90	98.905	ENSJJAG00000000530	Pum1	92	98.905	Jaculus_jaculus
ENSTTRG00000007436	PUM1	88	76.481	ENSKMAG00000003481	pum1	93	78.617	Kryptolebias_marmoratus
ENSTTRG00000007436	PUM1	88	76.164	ENSLBEG00000002527	pum1	93	78.578	Labrus_bergylta
ENSTTRG00000007436	PUM1	89	87.705	ENSLACG00000017188	PUM1	91	87.671	Latimeria_chalumnae
ENSTTRG00000007436	PUM1	89	89.781	ENSLOCG00000005210	pum1	91	89.927	Lepisosteus_oculatus
ENSTTRG00000007436	PUM1	90	98.906	ENSLAFG00000003178	PUM1	92	98.906	Loxodonta_africana
ENSTTRG00000007436	PUM1	90	99.453	ENSMFAG00000010291	PUM1	92	99.453	Macaca_fascicularis
ENSTTRG00000007436	PUM1	90	99.001	ENSMMUG00000013520	PUM1	92	99.001	Macaca_mulatta
ENSTTRG00000007436	PUM1	90	99.453	ENSMNEG00000034639	PUM1	92	99.453	Macaca_nemestrina
ENSTTRG00000007436	PUM1	90	99.453	ENSMLEG00000038743	PUM1	92	99.453	Mandrillus_leucophaeus
ENSTTRG00000007436	PUM1	88	76.937	ENSMAMG00000011606	pum1	100	75.741	Mastacembelus_armatus
ENSTTRG00000007436	PUM1	88	76.846	ENSMZEG00005005834	pum1	93	79.072	Maylandia_zebra
ENSTTRG00000007436	PUM1	90	97.630	ENSMGAG00000000724	PUM1	92	97.630	Meleagris_gallopavo
ENSTTRG00000007436	PUM1	90	98.724	ENSMAUG00000022090	Pum1	92	98.724	Mesocricetus_auratus
ENSTTRG00000007436	PUM1	90	99.271	ENSMICG00000007713	-	92	99.271	Microcebus_murinus
ENSTTRG00000007436	PUM1	90	96.992	ENSMICG00000012213	-	91	96.992	Microcebus_murinus
ENSTTRG00000007436	PUM1	90	98.724	ENSMOCG00000015463	Pum1	92	98.724	Microtus_ochrogaster
ENSTTRG00000007436	PUM1	87	87.816	ENSMMOG00000019817	pum1	100	90.361	Mola_mola
ENSTTRG00000007436	PUM1	90	98.086	ENSMODG00000017067	PUM1	92	98.086	Monodelphis_domestica
ENSTTRG00000007436	PUM1	87	88.046	ENSMALG00000016399	pum1	100	90.602	Monopterus_albus
ENSTTRG00000007436	PUM1	90	98.449	MGP_CAROLIEiJ_G0026549	Pum1	92	98.449	Mus_caroli
ENSTTRG00000007436	PUM1	90	98.723	ENSMUSG00000028580	Pum1	92	98.723	Mus_musculus
ENSTTRG00000007436	PUM1	90	98.540	MGP_PahariEiJ_G0028881	Pum1	92	98.540	Mus_pahari
ENSTTRG00000007436	PUM1	90	98.631	MGP_SPRETEiJ_G0027529	Pum1	92	98.631	Mus_spretus
ENSTTRG00000007436	PUM1	90	99.088	ENSMPUG00000015454	PUM1	92	99.088	Mustela_putorius_furo
ENSTTRG00000007436	PUM1	90	98.906	ENSMLUG00000006490	PUM1	92	98.906	Myotis_lucifugus
ENSTTRG00000007436	PUM1	90	99.179	ENSNGAG00000002378	Pum1	92	99.179	Nannospalax_galili
ENSTTRG00000007436	PUM1	69	92.105	ENSNBRG00000010689	pum1	90	92.105	Neolamprologus_brichardi
ENSTTRG00000007436	PUM1	90	97.993	ENSNLEG00000001151	PUM1	90	100.000	Nomascus_leucogenys
ENSTTRG00000007436	PUM1	67	100.000	ENSMEUG00000000976	-	70	99.015	Notamacropus_eugenii
ENSTTRG00000007436	PUM1	74	99.512	ENSOPRG00000001776	PUM1	65	99.512	Ochotona_princeps
ENSTTRG00000007436	PUM1	90	98.996	ENSODEG00000003465	PUM1	92	98.996	Octodon_degus
ENSTTRG00000007436	PUM1	88	77.195	ENSONIG00000002290	pum1	93	79.436	Oreochromis_niloticus
ENSTTRG00000007436	PUM1	79	78.074	ENSOANG00000004902	-	100	78.074	Ornithorhynchus_anatinus
ENSTTRG00000007436	PUM1	90	98.541	ENSOCUG00000008641	PUM1	92	98.541	Oryctolagus_cuniculus
ENSTTRG00000007436	PUM1	88	77.475	ENSORLG00000011482	pum1	93	78.876	Oryzias_latipes
ENSTTRG00000007436	PUM1	88	77.566	ENSORLG00020019461	pum1	93	78.876	Oryzias_latipes_hni
ENSTTRG00000007436	PUM1	88	77.566	ENSORLG00015011375	pum1	93	78.966	Oryzias_latipes_hsok
ENSTTRG00000007436	PUM1	87	92.289	ENSOMEG00000009312	pum1	100	76.641	Oryzias_melastigma
ENSTTRG00000007436	PUM1	89	96.143	ENSOGAG00000011063	PUM1	91	96.143	Otolemur_garnettii
ENSTTRG00000007436	PUM1	90	98.633	ENSOARG00000001899	PUM1	92	98.633	Ovis_aries
ENSTTRG00000007436	PUM1	90	99.453	ENSPPAG00000044003	PUM1	92	99.001	Pan_paniscus
ENSTTRG00000007436	PUM1	90	99.635	ENSPPRG00000001370	PUM1	92	99.635	Panthera_pardus
ENSTTRG00000007436	PUM1	90	99.453	ENSPTIG00000010798	PUM1	92	99.453	Panthera_tigris_altaica
ENSTTRG00000007436	PUM1	90	99.453	ENSPTRG00000000453	PUM1	92	99.001	Pan_troglodytes
ENSTTRG00000007436	PUM1	90	99.453	ENSPANG00000016338	PUM1	92	99.453	Papio_anubis
ENSTTRG00000007436	PUM1	89	80.217	ENSPKIG00000010578	pum1	92	79.837	Paramormyrops_kingsleyae
ENSTTRG00000007436	PUM1	90	98.175	ENSPSIG00000014118	PUM1	92	98.175	Pelodiscus_sinensis
ENSTTRG00000007436	PUM1	69	92.105	ENSPMGG00000005836	pum1	91	92.105	Periophthalmus_magnuspinnatus
ENSTTRG00000007436	PUM1	90	98.815	ENSPEMG00000010009	Pum1	92	98.815	Peromyscus_maniculatus_bairdii
ENSTTRG00000007436	PUM1	90	98.268	ENSPCIG00000014151	PUM1	92	98.268	Phascolarctos_cinereus
ENSTTRG00000007436	PUM1	88	78.020	ENSPFOG00000007289	pum1	99	82.263	Poecilia_formosa
ENSTTRG00000007436	PUM1	88	75.618	ENSPLAG00000007256	pum1	92	78.135	Poecilia_latipinna
ENSTTRG00000007436	PUM1	87	77.327	ENSPMEG00000019543	pum1	99	78.289	Poecilia_mexicana
ENSTTRG00000007436	PUM1	88	76.937	ENSPREG00000005195	pum1	91	86.842	Poecilia_reticulata
ENSTTRG00000007436	PUM1	90	97.321	ENSPPYG00000001621	PUM1	92	97.321	Pongo_abelii
ENSTTRG00000007436	PUM1	66	100.000	ENSPCAG00000001979	PUM1	68	100.000	Procavia_capensis
ENSTTRG00000007436	PUM1	90	99.271	ENSPCOG00000004398	PUM1	92	99.271	Propithecus_coquereli
ENSTTRG00000007436	PUM1	90	97.080	ENSPVAG00000005207	PUM1	90	97.080	Pteropus_vampyrus
ENSTTRG00000007436	PUM1	88	76.937	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSTTRG00000007436	PUM1	89	81.370	ENSPNAG00000026728	pum1	93	81.261	Pygocentrus_nattereri
ENSTTRG00000007436	PUM1	90	98.540	ENSRNOG00000011709	Pum1	92	98.540	Rattus_norvegicus
ENSTTRG00000007436	PUM1	90	99.453	ENSRBIG00000042521	PUM1	92	99.453	Rhinopithecus_bieti
ENSTTRG00000007436	PUM1	90	99.453	ENSRROG00000020156	PUM1	92	99.270	Rhinopithecus_roxellana
ENSTTRG00000007436	PUM1	90	99.362	ENSSBOG00000032037	PUM1	92	99.362	Saimiri_boliviensis_boliviensis
ENSTTRG00000007436	PUM1	90	98.086	ENSSHAG00000010918	PUM1	92	98.086	Sarcophilus_harrisii
ENSTTRG00000007436	PUM1	87	88.046	ENSSMAG00000010918	pum1	100	90.602	Scophthalmus_maximus
ENSTTRG00000007436	PUM1	88	76.937	ENSSDUG00000009021	pum1	93	79.436	Seriola_dumerili
ENSTTRG00000007436	PUM1	84	76.012	ENSSLDG00000009667	pum1	92	78.653	Seriola_lalandi_dorsalis
ENSTTRG00000007436	PUM1	84	100.000	ENSSARG00000003055	PUM1	86	100.000	Sorex_araneus
ENSTTRG00000007436	PUM1	90	97.354	ENSSPUG00000006267	PUM1	92	97.354	Sphenodon_punctatus
ENSTTRG00000007436	PUM1	87	91.084	ENSSPAG00000016636	pum1	100	77.220	Stegastes_partitus
ENSTTRG00000007436	PUM1	90	99.635	ENSSSCG00000003591	PUM1	92	99.635	Sus_scrofa
ENSTTRG00000007436	PUM1	88	76.734	ENSTRUG00000013121	pum1	91	92.105	Takifugu_rubripes
ENSTTRG00000007436	PUM1	88	76.572	ENSTNIG00000016983	pum1	92	78.890	Tetraodon_nigroviridis
ENSTTRG00000007436	PUM1	76	95.122	ENSTBEG00000013810	PUM1	80	95.122	Tupaia_belangeri
ENSTTRG00000007436	PUM1	88	98.891	ENSUAMG00000018262	-	91	98.891	Ursus_americanus
ENSTTRG00000007436	PUM1	84	99.517	ENSUMAG00000009211	PUM1	91	99.517	Ursus_maritimus
ENSTTRG00000007436	PUM1	82	99.626	ENSVPAG00000005902	PUM1	84	99.626	Vicugna_pacos
ENSTTRG00000007436	PUM1	90	99.362	ENSVVUG00000014631	PUM1	92	99.362	Vulpes_vulpes
ENSTTRG00000007436	PUM1	89	88.143	ENSXETG00000012904	pum1	91	88.143	Xenopus_tropicalis
ENSTTRG00000007436	PUM1	88	76.117	ENSXMAG00000002945	pum1	93	78.435	Xiphophorus_maculatus