EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000007544 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 6390 bases
Position: chrGeneScaffold_2677:75745-82134
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000007137	PseudoU_synth_2	PF00849.22	1.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000007544	RPUSD3-201	1059	-	ENSTTRP00000007137	352 (aa)	-	UPI00018B75D1

Gene Model

Click here to download ENSTTRG00000007544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000007544's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000007544	RPUSD3	78	31.359	ENSTTRG00000001555	RPUSD4	71	31.359

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000007544	RPUSD3	100	80.398	ENSG00000156990	RPUSD3	100	80.398	Homo_sapiens
ENSTTRG00000007544	RPUSD3	100	80.966	ENSAMEG00000016227	RPUSD3	100	80.966	Ailuropoda_melanoleuca
ENSTTRG00000007544	RPUSD3	79	53.929	ENSACAG00000009836	RPUSD3	79	53.929	Anolis_carolinensis
ENSTTRG00000007544	RPUSD3	78	57.292	ENSANAG00000007127	-	96	59.606	Aotus_nancymaae
ENSTTRG00000007544	RPUSD3	53	82.353	ENSANAG00000038118	-	89	82.353	Aotus_nancymaae
ENSTTRG00000007544	RPUSD3	57	82.500	ENSANAG00000019945	-	80	82.500	Aotus_nancymaae
ENSTTRG00000007544	RPUSD3	98	85.174	ENSBTAG00000007968	RPUSD3	100	85.174	Bos_taurus
ENSTTRG00000007544	RPUSD3	100	82.386	ENSCAFG00000029733	RPUSD3	100	82.386	Canis_familiaris
ENSTTRG00000007544	RPUSD3	100	82.386	ENSCAFG00020008582	RPUSD3	100	82.386	Canis_lupus_dingo
ENSTTRG00000007544	RPUSD3	98	83.430	ENSCHIG00000026027	RPUSD3	100	83.430	Capra_hircus
ENSTTRG00000007544	RPUSD3	98	73.276	ENSTSYG00000009994	RPUSD3	99	73.276	Carlito_syrichta
ENSTTRG00000007544	RPUSD3	75	79.468	ENSCAPG00000017559	RPUSD3	99	79.468	Cavia_aperea
ENSTTRG00000007544	RPUSD3	75	79.167	ENSCPOG00000037956	RPUSD3	92	65.242	Cavia_porcellus
ENSTTRG00000007544	RPUSD3	100	78.187	ENSCCAG00000029530	RPUSD3	95	83.744	Cebus_capucinus
ENSTTRG00000007544	RPUSD3	100	80.966	ENSCATG00000036939	RPUSD3	100	80.966	Cercocebus_atys
ENSTTRG00000007544	RPUSD3	100	80.114	ENSCSAG00000010506	RPUSD3	100	80.114	Chlorocebus_sabaeus
ENSTTRG00000007544	RPUSD3	50	82.540	ENSCHOG00000010151	-	67	82.540	Choloepus_hoffmanni
ENSTTRG00000007544	RPUSD3	71	56.000	ENSCPBG00000008825	RPUSD3	93	55.600	Chrysemys_picta_bellii
ENSTTRG00000007544	RPUSD3	100	80.114	ENSCANG00000040711	RPUSD3	100	80.114	Colobus_angolensis_palliatus
ENSTTRG00000007544	RPUSD3	99	71.143	ENSCGRG00001004923	Rpusd3	97	71.143	Cricetulus_griseus_chok1gshd
ENSTTRG00000007544	RPUSD3	98	71.512	ENSCGRG00000018315	Rpusd3	100	71.512	Cricetulus_griseus_crigri
ENSTTRG00000007544	RPUSD3	99	73.714	ENSDNOG00000039160	RPUSD3	93	73.714	Dasypus_novemcinctus
ENSTTRG00000007544	RPUSD3	74	76.119	ENSDORG00000026827	Rpusd3	92	76.119	Dipodomys_ordii
ENSTTRG00000007544	RPUSD3	100	71.875	ENSETEG00000006538	RPUSD3	99	71.875	Echinops_telfairi
ENSTTRG00000007544	RPUSD3	58	38.350	ENSEBUG00000015605	RPUSD3	67	38.350	Eptatretus_burgeri
ENSTTRG00000007544	RPUSD3	100	81.250	ENSEASG00005014160	RPUSD3	98	81.250	Equus_asinus_asinus
ENSTTRG00000007544	RPUSD3	100	81.534	ENSECAG00000019988	RPUSD3	98	81.534	Equus_caballus
ENSTTRG00000007544	RPUSD3	99	56.497	ENSEEUG00000007353	RPUSD3	100	56.497	Erinaceus_europaeus
ENSTTRG00000007544	RPUSD3	100	81.534	ENSFCAG00000014199	RPUSD3	100	81.534	Felis_catus
ENSTTRG00000007544	RPUSD3	77	47.794	ENSFALG00000012968	RPUSD3	99	47.794	Ficedula_albicollis
ENSTTRG00000007544	RPUSD3	74	79.310	ENSFDAG00000008350	RPUSD3	80	79.310	Fukomys_damarensis
ENSTTRG00000007544	RPUSD3	74	57.414	ENSGAGG00000007493	RPUSD3	82	57.034	Gopherus_agassizii
ENSTTRG00000007544	RPUSD3	100	79.830	ENSGGOG00000013120	RPUSD3	100	79.830	Gorilla_gorilla
ENSTTRG00000007544	RPUSD3	86	75.083	ENSHGLG00000011722	RPUSD3	77	75.083	Heterocephalus_glaber_female
ENSTTRG00000007544	RPUSD3	86	75.083	ENSHGLG00100016038	RPUSD3	77	75.083	Heterocephalus_glaber_male
ENSTTRG00000007544	RPUSD3	100	75.284	ENSSTOG00000002125	RPUSD3	100	75.284	Ictidomys_tridecemlineatus
ENSTTRG00000007544	RPUSD3	98	70.640	ENSJJAG00000012679	Rpusd3	100	70.640	Jaculus_jaculus
ENSTTRG00000007544	RPUSD3	98	79.942	ENSLAFG00000017501	RPUSD3	100	79.942	Loxodonta_africana
ENSTTRG00000007544	RPUSD3	100	80.398	ENSMFAG00000032407	RPUSD3	100	80.398	Macaca_fascicularis
ENSTTRG00000007544	RPUSD3	100	76.705	ENSMMUG00000010628	RPUSD3	97	84.615	Macaca_mulatta
ENSTTRG00000007544	RPUSD3	100	80.682	ENSMNEG00000040308	RPUSD3	100	80.682	Macaca_nemestrina
ENSTTRG00000007544	RPUSD3	100	80.682	ENSMLEG00000033940	RPUSD3	100	80.682	Mandrillus_leucophaeus
ENSTTRG00000007544	RPUSD3	98	72.384	ENSMAUG00000015473	Rpusd3	100	72.384	Mesocricetus_auratus
ENSTTRG00000007544	RPUSD3	98	76.744	ENSMICG00000002315	RPUSD3	100	76.744	Microcebus_murinus
ENSTTRG00000007544	RPUSD3	97	72.141	ENSMOCG00000022613	Rpusd3	99	72.141	Microtus_ochrogaster
ENSTTRG00000007544	RPUSD3	97	54.227	ENSMODG00000005210	RPUSD3	90	54.094	Monodelphis_domestica
ENSTTRG00000007544	RPUSD3	98	71.802	MGP_CAROLIEiJ_G0028725	Rpusd3	100	71.802	Mus_caroli
ENSTTRG00000007544	RPUSD3	98	71.512	ENSMUSG00000051169	Rpusd3	100	71.512	Mus_musculus
ENSTTRG00000007544	RPUSD3	98	72.384	MGP_PahariEiJ_G0022476	Rpusd3	100	72.384	Mus_pahari
ENSTTRG00000007544	RPUSD3	98	71.512	MGP_SPRETEiJ_G0029753	Rpusd3	100	71.512	Mus_spretus
ENSTTRG00000007544	RPUSD3	100	80.682	ENSMPUG00000017132	RPUSD3	100	80.682	Mustela_putorius_furo
ENSTTRG00000007544	RPUSD3	98	81.449	ENSMLUG00000006135	RPUSD3	99	81.449	Myotis_lucifugus
ENSTTRG00000007544	RPUSD3	97	73.021	ENSNGAG00000023704	Rpusd3	99	73.021	Nannospalax_galili
ENSTTRG00000007544	RPUSD3	100	67.614	ENSNLEG00000004214	RPUSD3	95	84.236	Nomascus_leucogenys
ENSTTRG00000007544	RPUSD3	74	63.602	ENSMEUG00000013098	-	100	63.602	Notamacropus_eugenii
ENSTTRG00000007544	RPUSD3	99	59.483	ENSOPRG00000002300	RPUSD3	99	59.483	Ochotona_princeps
ENSTTRG00000007544	RPUSD3	75	78.030	ENSODEG00000018137	RPUSD3	91	78.030	Octodon_degus
ENSTTRG00000007544	RPUSD3	81	49.650	ENSOANG00000012081	-	99	48.611	Ornithorhynchus_anatinus
ENSTTRG00000007544	RPUSD3	98	65.057	ENSOCUG00000027885	RPUSD3	100	65.057	Oryctolagus_cuniculus
ENSTTRG00000007544	RPUSD3	89	82.166	ENSOGAG00000012592	RPUSD3	100	82.166	Otolemur_garnettii
ENSTTRG00000007544	RPUSD3	99	84.900	ENSOARG00000005928	RPUSD3	99	84.900	Ovis_aries
ENSTTRG00000007544	RPUSD3	100	79.545	ENSPPAG00000038083	RPUSD3	100	79.545	Pan_paniscus
ENSTTRG00000007544	RPUSD3	100	81.250	ENSPPRG00000024433	RPUSD3	100	81.250	Panthera_pardus
ENSTTRG00000007544	RPUSD3	98	82.267	ENSPTIG00000006828	RPUSD3	100	82.267	Panthera_tigris_altaica
ENSTTRG00000007544	RPUSD3	100	79.261	ENSPTRG00000051760	RPUSD3	100	79.261	Pan_troglodytes
ENSTTRG00000007544	RPUSD3	100	81.250	ENSPANG00000023885	RPUSD3	100	81.250	Papio_anubis
ENSTTRG00000007544	RPUSD3	98	74.419	ENSPEMG00000017245	Rpusd3	100	74.419	Peromyscus_maniculatus_bairdii
ENSTTRG00000007544	RPUSD3	97	57.018	ENSPCIG00000021901	RPUSD3	97	55.977	Phascolarctos_cinereus
ENSTTRG00000007544	RPUSD3	100	80.682	ENSPPYG00000013676	RPUSD3	100	80.682	Pongo_abelii
ENSTTRG00000007544	RPUSD3	82	60.554	ENSPCAG00000013731	-	100	60.554	Procavia_capensis
ENSTTRG00000007544	RPUSD3	100	80.114	ENSPCOG00000018314	RPUSD3	100	80.114	Propithecus_coquereli
ENSTTRG00000007544	RPUSD3	100	80.966	ENSPVAG00000011107	RPUSD3	100	80.966	Pteropus_vampyrus
ENSTTRG00000007544	RPUSD3	98	68.023	ENSRNOG00000009084	Rpusd3	100	68.023	Rattus_norvegicus
ENSTTRG00000007544	RPUSD3	99	81.429	ENSRBIG00000041230	RPUSD3	100	80.966	Rhinopithecus_bieti
ENSTTRG00000007544	RPUSD3	99	81.143	ENSRROG00000043328	RPUSD3	100	80.682	Rhinopithecus_roxellana
ENSTTRG00000007544	RPUSD3	100	77.620	ENSSBOG00000036106	RPUSD3	100	77.620	Saimiri_boliviensis_boliviensis
ENSTTRG00000007544	RPUSD3	88	57.143	ENSSHAG00000015536	RPUSD3	99	56.818	Sarcophilus_harrisii
ENSTTRG00000007544	RPUSD3	100	81.818	ENSSSCG00000011555	RPUSD3	100	81.818	Sus_scrofa
ENSTTRG00000007544	RPUSD3	62	49.770	ENSTGUG00000008744	RPUSD3	93	49.770	Taeniopygia_guttata
ENSTTRG00000007544	RPUSD3	82	75.087	ENSTBEG00000000176	RPUSD3	100	75.087	Tupaia_belangeri
ENSTTRG00000007544	RPUSD3	89	83.439	ENSUAMG00000011354	RPUSD3	98	83.439	Ursus_americanus
ENSTTRG00000007544	RPUSD3	100	80.966	ENSUMAG00000018830	RPUSD3	100	80.966	Ursus_maritimus
ENSTTRG00000007544	RPUSD3	98	82.558	ENSVVUG00000023735	RPUSD3	100	82.558	Vulpes_vulpes
ENSTTRG00000007544	RPUSD3	80	47.163	ENSXETG00000023546	rpusd3	99	47.163	Xenopus_tropicalis