EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000007618 (Gene tree)
Gene ID: -
Gene Symbol: PABPC1L
Alias: C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name: poly(A) binding protein cytoplasmic 1 like
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 22152 bases
Position: chrscaffold_113855:40787-62938
Accession: 15797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000007204	PABP	PF00658.18	1.1e-22	1	1
ENSTTRP00000007204	RRM_1	PF00076.22	3.9e-81	1	4
ENSTTRP00000007204	RRM_1	PF00076.22	3.9e-81	2	4
ENSTTRP00000007204	RRM_1	PF00076.22	3.9e-81	3	4
ENSTTRP00000007204	RRM_1	PF00076.22	3.9e-81	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000007616	PABPC1L-201	1755	-	ENSTTRP00000007204	585 (aa)	-	UPI00018B6417

Gene Model

Click here to download ENSTTRG00000007618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000007618's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000007618	PABPC1L	100	67.720	ENSTTRG00000004689	PABPC3	93	67.521
ENSTTRG00000007618	PABPC1L	63	34.940	ENSTTRG00000011656	ELAVL2	85	34.940
ENSTTRG00000007618	PABPC1L	64	33.735	ENSTTRG00000001789	ELAVL3	92	33.735
ENSTTRG00000007618	PABPC1L	61	35.450	ENSTTRG00000005217	SF3B4	54	37.195
ENSTTRG00000007618	PABPC1L	62	69.898	ENSTTRG00000013181	-	98	69.898
ENSTTRG00000007618	PABPC1L	89	51.761	ENSTTRG00000014340	PABPC4	92	52.717
ENSTTRG00000007618	PABPC1L	50	42.105	ENSTTRG00000008587	RBM3	53	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000007618	PABPC1L	100	86.318	ENSG00000101104	PABPC1L	98	90.123	Homo_sapiens
ENSTTRG00000007618	PABPC1L	100	65.615	ENSAPOG00000010842	pabpc1l	94	64.966	Acanthochromis_polyacanthus
ENSTTRG00000007618	PABPC1L	100	76.814	ENSAMEG00000004099	PABPC1L	95	77.997	Ailuropoda_melanoleuca
ENSTTRG00000007618	PABPC1L	100	65.833	ENSACIG00000021004	-	93	71.186	Amphilophus_citrinellus
ENSTTRG00000007618	PABPC1L	100	64.803	ENSAOCG00000006167	-	94	64.646	Amphiprion_ocellaris
ENSTTRG00000007618	PABPC1L	93	73.611	ENSAPEG00000010558	-	98	76.959	Amphiprion_percula
ENSTTRG00000007618	PABPC1L	100	67.500	ENSATEG00000007428	pabpc1l	94	67.466	Anabas_testudineus
ENSTTRG00000007618	PABPC1L	98	73.122	ENSAPLG00000008415	PABPC1L	94	72.666	Anas_platyrhynchos
ENSTTRG00000007618	PABPC1L	100	71.778	ENSACAG00000011841	PABPC1L	93	71.524	Anolis_carolinensis
ENSTTRG00000007618	PABPC1L	100	84.459	ENSANAG00000026826	PABPC1L	94	84.375	Aotus_nancymaae
ENSTTRG00000007618	PABPC1L	100	65.738	ENSACLG00000024791	pabpc1l	94	65.320	Astatotilapia_calliptera
ENSTTRG00000007618	PABPC1L	100	69.622	ENSAMXG00000013552	pabpc1l	94	69.309	Astyanax_mexicanus
ENSTTRG00000007618	PABPC1L	61	98.214	ENSBTAG00000055300	-	100	98.214	Bos_taurus
ENSTTRG00000007618	PABPC1L	69	75.088	ENSBTAG00000016849	PABPC1L	87	75.088	Bos_taurus
ENSTTRG00000007618	PABPC1L	100	84.628	ENSCJAG00000017628	PABPC1L	94	84.549	Callithrix_jacchus
ENSTTRG00000007618	PABPC1L	62	77.586	ENSCJAG00000038506	-	100	77.586	Callithrix_jacchus
ENSTTRG00000007618	PABPC1L	100	75.119	ENSCAFG00000009573	PABPC1L	95	74.797	Canis_familiaris
ENSTTRG00000007618	PABPC1L	100	87.627	ENSCAFG00020013828	PABPC1L	94	87.979	Canis_lupus_dingo
ENSTTRG00000007618	PABPC1L	100	88.644	ENSCHIG00000025759	PABPC1L	88	88.676	Capra_hircus
ENSTTRG00000007618	PABPC1L	100	84.291	ENSTSYG00000006645	PABPC1L	94	84.201	Carlito_syrichta
ENSTTRG00000007618	PABPC1L	98	75.810	ENSCAPG00000014519	PABPC1L	93	75.639	Cavia_aperea
ENSTTRG00000007618	PABPC1L	100	78.930	ENSCPOG00000013633	PABPC1L	94	78.866	Cavia_porcellus
ENSTTRG00000007618	PABPC1L	100	84.459	ENSCCAG00000023338	PABPC1L	94	84.375	Cebus_capucinus
ENSTTRG00000007618	PABPC1L	100	86.486	ENSCATG00000034065	PABPC1L	94	86.458	Cercocebus_atys
ENSTTRG00000007618	PABPC1L	100	78.595	ENSCLAG00000005298	PABPC1L	94	78.694	Chinchilla_lanigera
ENSTTRG00000007618	PABPC1L	100	86.655	ENSCSAG00000014242	PABPC1L	94	86.632	Chlorocebus_sabaeus
ENSTTRG00000007618	PABPC1L	74	80.995	ENSCPBG00000017755	-	99	80.995	Chrysemys_picta_bellii
ENSTTRG00000007618	PABPC1L	55	81.538	ENSCPBG00000007810	-	83	81.538	Chrysemys_picta_bellii
ENSTTRG00000007618	PABPC1L	80	70.130	ENSCING00000002796	-	91	45.530	Ciona_intestinalis
ENSTTRG00000007618	PABPC1L	100	55.360	ENSCSAVG00000003102	-	100	80.822	Ciona_savignyi
ENSTTRG00000007618	PABPC1L	86	73.973	ENSCSAVG00000004246	-	79	76.364	Ciona_savignyi
ENSTTRG00000007618	PABPC1L	100	81.697	ENSCANG00000037530	PABPC1L	94	81.538	Colobus_angolensis_palliatus
ENSTTRG00000007618	PABPC1L	96	73.913	ENSCGRG00001021938	Pabpc1l	94	74.010	Cricetulus_griseus_chok1gshd
ENSTTRG00000007618	PABPC1L	96	73.913	ENSCGRG00000007946	Pabpc1l	94	74.010	Cricetulus_griseus_crigri
ENSTTRG00000007618	PABPC1L	99	62.331	ENSCSEG00000021295	pabpc1l	93	62.304	Cynoglossus_semilaevis
ENSTTRG00000007618	PABPC1L	100	66.889	ENSCVAG00000015943	-	86	87.786	Cyprinodon_variegatus
ENSTTRG00000007618	PABPC1L	100	68.586	ENSDARG00000002597	pabpc1l	88	88.462	Danio_rerio
ENSTTRG00000007618	PABPC1L	100	85.811	ENSDNOG00000048450	PABPC1L	94	85.764	Dasypus_novemcinctus
ENSTTRG00000007618	PABPC1L	100	82.601	ENSDORG00000001067	Pabpc1l	94	82.465	Dipodomys_ordii
ENSTTRG00000007618	PABPC1L	95	87.603	ENSETEG00000009969	PABPC1L	67	87.603	Echinops_telfairi
ENSTTRG00000007618	PABPC1L	61	96.429	ENSEASG00005023408	-	100	96.429	Equus_asinus_asinus
ENSTTRG00000007618	PABPC1L	60	77.833	ENSEASG00005023407	-	82	77.833	Equus_asinus_asinus
ENSTTRG00000007618	PABPC1L	69	85.022	ENSECAG00000040139	-	81	85.022	Equus_caballus
ENSTTRG00000007618	PABPC1L	100	82.264	ENSEEUG00000005978	PABPC1L	94	82.118	Erinaceus_europaeus
ENSTTRG00000007618	PABPC1L	100	68.791	ENSELUG00000001811	pabpc1l	94	68.624	Esox_lucius
ENSTTRG00000007618	PABPC1L	100	88.136	ENSFCAG00000011692	PABPC1L	94	88.153	Felis_catus
ENSTTRG00000007618	PABPC1L	84	76.680	ENSFALG00000005372	PABPC1L	85	76.680	Ficedula_albicollis
ENSTTRG00000007618	PABPC1L	100	77.403	ENSFDAG00000008291	PABPC1L	94	77.296	Fukomys_damarensis
ENSTTRG00000007618	PABPC1L	100	67.934	ENSFHEG00000003398	pabpc1l	94	67.742	Fundulus_heteroclitus
ENSTTRG00000007618	PABPC1L	100	67.327	ENSGMOG00000004437	pabpc1l	93	67.119	Gadus_morhua
ENSTTRG00000007618	PABPC1L	96	67.395	ENSGALG00000004123	PABPC1L	99	82.494	Gallus_gallus
ENSTTRG00000007618	PABPC1L	100	63.365	ENSGAFG00000021057	pabpc1l	94	63.065	Gambusia_affinis
ENSTTRG00000007618	PABPC1L	100	65.466	ENSGACG00000002792	pabpc1l	95	65.378	Gasterosteus_aculeatus
ENSTTRG00000007618	PABPC1L	100	73.366	ENSGAGG00000000589	PABPC1L	93	73.154	Gopherus_agassizii
ENSTTRG00000007618	PABPC1L	100	86.655	ENSGGOG00000004584	PABPC1L	94	86.632	Gorilla_gorilla
ENSTTRG00000007618	PABPC1L	100	65.574	ENSHBUG00000006134	pabpc1l	94	65.320	Haplochromis_burtoni
ENSTTRG00000007618	PABPC1L	100	80.100	ENSHGLG00000008434	PABPC1L	94	79.897	Heterocephalus_glaber_female
ENSTTRG00000007618	PABPC1L	100	80.100	ENSHGLG00100012151	PABPC1L	94	79.897	Heterocephalus_glaber_male
ENSTTRG00000007618	PABPC1L	61	82.022	ENSHGLG00100019506	-	100	82.022	Heterocephalus_glaber_male
ENSTTRG00000007618	PABPC1L	100	65.254	ENSHCOG00000009270	pabpc1l	94	65.157	Hippocampus_comes
ENSTTRG00000007618	PABPC1L	60	58.621	ENSIPUG00000006760	-	87	58.621	Ictalurus_punctatus
ENSTTRG00000007618	PABPC1L	100	69.130	ENSIPUG00000012602	pabpc1l	94	68.803	Ictalurus_punctatus
ENSTTRG00000007618	PABPC1L	60	59.195	ENSIPUG00000006780	-	84	59.195	Ictalurus_punctatus
ENSTTRG00000007618	PABPC1L	100	83.953	ENSSTOG00000003739	PABPC1L	94	83.854	Ictidomys_tridecemlineatus
ENSTTRG00000007618	PABPC1L	96	64.764	ENSJJAG00000022406	Pabpc1l	93	62.069	Jaculus_jaculus
ENSTTRG00000007618	PABPC1L	100	67.337	ENSKMAG00000016847	pabpc1l	94	67.126	Kryptolebias_marmoratus
ENSTTRG00000007618	PABPC1L	100	64.553	ENSLBEG00000010084	pabpc1l	94	64.107	Labrus_bergylta
ENSTTRG00000007618	PABPC1L	100	68.293	ENSLACG00000005762	PABPC1L	99	70.275	Latimeria_chalumnae
ENSTTRG00000007618	PABPC1L	100	69.558	ENSLOCG00000007519	pabpc1l	93	69.412	Lepisosteus_oculatus
ENSTTRG00000007618	PABPC1L	100	81.967	ENSLAFG00000003553	PABPC1L	95	81.818	Loxodonta_africana
ENSTTRG00000007618	PABPC1L	100	86.486	ENSMFAG00000040365	PABPC1L	94	86.458	Macaca_fascicularis
ENSTTRG00000007618	PABPC1L	100	83.866	ENSMNEG00000032298	PABPC1L	94	83.765	Macaca_nemestrina
ENSTTRG00000007618	PABPC1L	100	86.486	ENSMLEG00000043139	PABPC1L	94	86.458	Mandrillus_leucophaeus
ENSTTRG00000007618	PABPC1L	100	66.057	ENSMAMG00000011854	pabpc1l	94	65.641	Mastacembelus_armatus
ENSTTRG00000007618	PABPC1L	100	65.738	ENSMZEG00005023713	pabpc1l	94	65.320	Maylandia_zebra
ENSTTRG00000007618	PABPC1L	97	73.208	ENSMGAG00000003674	PABPC1L	93	73.208	Meleagris_gallopavo
ENSTTRG00000007618	PABPC1L	100	73.702	ENSMOCG00000013186	Pabpc1l	94	73.494	Microtus_ochrogaster
ENSTTRG00000007618	PABPC1L	100	66.777	ENSMMOG00000020574	-	90	88.462	Mola_mola
ENSTTRG00000007618	PABPC1L	97	76.460	ENSMODG00000016198	PABPC1L	97	76.460	Monodelphis_domestica
ENSTTRG00000007618	PABPC1L	100	66.069	ENSMALG00000021622	pabpc1l	97	65.662	Monopterus_albus
ENSTTRG00000007618	PABPC1L	96	74.087	MGP_CAROLIEiJ_G0024627	Pabpc1l	94	74.182	Mus_caroli
ENSTTRG00000007618	PABPC1L	96	74.087	ENSMUSG00000054582	Pabpc1l	94	74.182	Mus_musculus
ENSTTRG00000007618	PABPC1L	96	73.958	MGP_PahariEiJ_G0026071	Pabpc1l	94	74.055	Mus_pahari
ENSTTRG00000007618	PABPC1L	96	74.087	MGP_SPRETEiJ_G0025549	Pabpc1l	94	74.182	Mus_spretus
ENSTTRG00000007618	PABPC1L	100	86.644	ENSMPUG00000017646	PABPC1L	94	86.621	Mustela_putorius_furo
ENSTTRG00000007618	PABPC1L	100	79.672	ENSMLUG00000006324	PABPC1L	94	79.630	Myotis_lucifugus
ENSTTRG00000007618	PABPC1L	96	76.870	ENSNGAG00000010458	Pabpc1l	94	76.592	Nannospalax_galili
ENSTTRG00000007618	PABPC1L	100	66.116	ENSNBRG00000016633	pabpc1l	93	71.635	Neolamprologus_brichardi
ENSTTRG00000007618	PABPC1L	92	70.803	ENSMEUG00000007905	-	89	70.803	Notamacropus_eugenii
ENSTTRG00000007618	PABPC1L	100	82.293	ENSOPRG00000011846	PABPC1L	94	82.149	Ochotona_princeps
ENSTTRG00000007618	PABPC1L	60	75.625	ENSODEG00000002920	-	97	75.625	Octodon_degus
ENSTTRG00000007618	PABPC1L	96	76.148	ENSODEG00000015482	PABPC1L	96	76.148	Octodon_degus
ENSTTRG00000007618	PABPC1L	100	66.066	ENSONIG00000017314	pabpc1l	94	65.825	Oreochromis_niloticus
ENSTTRG00000007618	PABPC1L	93	66.667	ENSOANG00000015793	-	100	66.667	Ornithorhynchus_anatinus
ENSTTRG00000007618	PABPC1L	100	75.987	ENSOCUG00000003005	PABPC1L	95	75.689	Oryctolagus_cuniculus
ENSTTRG00000007618	PABPC1L	100	65.620	ENSORLG00000010322	pabpc1l	93	71.154	Oryzias_latipes
ENSTTRG00000007618	PABPC1L	100	65.894	ENSORLG00020021193	pabpc1l	93	71.154	Oryzias_latipes_hni
ENSTTRG00000007618	PABPC1L	100	65.620	ENSORLG00015017018	pabpc1l	93	71.154	Oryzias_latipes_hsok
ENSTTRG00000007618	PABPC1L	100	62.637	ENSOMEG00000010789	pabpc1l	95	62.319	Oryzias_melastigma
ENSTTRG00000007618	PABPC1L	100	82.759	ENSOGAG00000032999	PABPC1L	95	82.631	Otolemur_garnettii
ENSTTRG00000007618	PABPC1L	100	88.682	ENSOARG00000004578	PABPC1L	94	88.715	Ovis_aries
ENSTTRG00000007618	PABPC1L	100	86.149	ENSPPAG00000039677	PABPC1L	94	86.111	Pan_paniscus
ENSTTRG00000007618	PABPC1L	65	81.056	ENSPPRG00000019327	-	98	81.056	Panthera_pardus
ENSTTRG00000007618	PABPC1L	99	88.185	ENSPTIG00000006524	PABPC1L	94	88.204	Panthera_tigris_altaica
ENSTTRG00000007618	PABPC1L	65	89.815	ENSPTRG00000013531	PABPC1L	98	89.815	Pan_troglodytes
ENSTTRG00000007618	PABPC1L	100	86.486	ENSPANG00000018788	PABPC1L	94	86.458	Papio_anubis
ENSTTRG00000007618	PABPC1L	100	68.926	ENSPKIG00000007322	pabpc1l	94	68.761	Paramormyrops_kingsleyae
ENSTTRG00000007618	PABPC1L	55	83.206	ENSPKIG00000016810	-	93	83.206	Paramormyrops_kingsleyae
ENSTTRG00000007618	PABPC1L	71	82.578	ENSPSIG00000013289	PABPC1L	99	82.578	Pelodiscus_sinensis
ENSTTRG00000007618	PABPC1L	65	87.121	ENSPMGG00000023117	pabpc1l	92	87.121	Periophthalmus_magnuspinnatus
ENSTTRG00000007618	PABPC1L	74	67.000	ENSPMGG00000023121	-	93	67.000	Periophthalmus_magnuspinnatus
ENSTTRG00000007618	PABPC1L	100	74.372	ENSPEMG00000020671	Pabpc1l	94	74.182	Peromyscus_maniculatus_bairdii
ENSTTRG00000007618	PABPC1L	100	67.224	ENSPFOG00000013241	pabpc1l	94	66.497	Poecilia_formosa
ENSTTRG00000007618	PABPC1L	100	66.501	ENSPLAG00000017490	-	94	66.269	Poecilia_latipinna
ENSTTRG00000007618	PABPC1L	55	88.462	ENSPLAG00000023686	-	92	88.462	Poecilia_latipinna
ENSTTRG00000007618	PABPC1L	55	88.462	ENSPMEG00000009185	-	88	88.462	Poecilia_mexicana
ENSTTRG00000007618	PABPC1L	100	66.667	ENSPMEG00000007677	pabpc1l	94	66.438	Poecilia_mexicana
ENSTTRG00000007618	PABPC1L	69	75.862	ENSPREG00000015886	pabpc1l	99	75.862	Poecilia_reticulata
ENSTTRG00000007618	PABPC1L	100	86.318	ENSPPYG00000011042	PABPC1L	94	86.285	Pongo_abelii
ENSTTRG00000007618	PABPC1L	64	92.188	ENSPCAG00000011787	-	75	92.188	Procavia_capensis
ENSTTRG00000007618	PABPC1L	100	83.953	ENSPCOG00000020630	PABPC1L	94	83.854	Propithecus_coquereli
ENSTTRG00000007618	PABPC1L	100	85.593	ENSPVAG00000012663	PABPC1L	94	85.366	Pteropus_vampyrus
ENSTTRG00000007618	PABPC1L	100	65.261	ENSPNYG00000004101	pabpc1l	93	71.635	Pundamilia_nyererei
ENSTTRG00000007618	PABPC1L	100	62.664	ENSPNAG00000021248	pabpc1l	94	62.162	Pygocentrus_nattereri
ENSTTRG00000007618	PABPC1L	96	73.565	ENSRNOG00000012750	Pabpc1l	94	73.666	Rattus_norvegicus
ENSTTRG00000007618	PABPC1L	100	86.149	ENSRBIG00000035381	PABPC1L	94	86.111	Rhinopithecus_bieti
ENSTTRG00000007618	PABPC1L	100	85.980	ENSRROG00000044498	PABPC1L	94	85.938	Rhinopithecus_roxellana
ENSTTRG00000007618	PABPC1L	100	84.797	ENSSBOG00000009532	-	94	84.722	Saimiri_boliviensis_boliviensis
ENSTTRG00000007618	PABPC1L	98	69.979	ENSSHAG00000011446	PABPC1L	94	69.584	Sarcophilus_harrisii
ENSTTRG00000007618	PABPC1L	100	70.627	ENSSFOG00015017304	pabpc1l	94	70.508	Scleropages_formosus
ENSTTRG00000007618	PABPC1L	100	66.060	ENSSMAG00000010516	pabpc1l	93	88.372	Scophthalmus_maximus
ENSTTRG00000007618	PABPC1L	100	66.232	ENSSDUG00000014743	pabpc1l	94	65.997	Seriola_dumerili
ENSTTRG00000007618	PABPC1L	100	66.667	ENSSLDG00000006981	pabpc1l	95	75.000	Seriola_lalandi_dorsalis
ENSTTRG00000007618	PABPC1L	100	71.941	ENSSPUG00000004233	PABPC1L	93	71.692	Sphenodon_punctatus
ENSTTRG00000007618	PABPC1L	100	63.959	ENSSPAG00000017137	pabpc1l	94	63.826	Stegastes_partitus
ENSTTRG00000007618	PABPC1L	100	90.339	ENSSSCG00000007382	PABPC1L	94	90.244	Sus_scrofa
ENSTTRG00000007618	PABPC1L	100	73.008	ENSTGUG00000005114	PABPC1L	94	72.788	Taeniopygia_guttata
ENSTTRG00000007618	PABPC1L	100	65.789	ENSTRUG00000011085	pabpc1l	95	65.709	Takifugu_rubripes
ENSTTRG00000007618	PABPC1L	100	64.521	ENSTNIG00000017903	pabpc1l	93	64.407	Tetraodon_nigroviridis
ENSTTRG00000007618	PABPC1L	94	90.411	ENSTBEG00000002851	PABPC1L	74	90.411	Tupaia_belangeri
ENSTTRG00000007618	PABPC1L	100	84.237	ENSUAMG00000017682	PABPC1L	94	84.146	Ursus_americanus
ENSTTRG00000007618	PABPC1L	70	89.702	ENSUMAG00000025436	PABPC1L	94	89.702	Ursus_maritimus
ENSTTRG00000007618	PABPC1L	98	91.700	ENSVVUG00000018939	PABPC1L	92	91.700	Vulpes_vulpes
ENSTTRG00000007618	PABPC1L	100	68.152	ENSXETG00000022831	pabpc1l	93	67.966	Xenopus_tropicalis
ENSTTRG00000007618	PABPC1L	100	67.057	ENSXCOG00000005459	pabpc1l	99	84.397	Xiphophorus_couchianus
ENSTTRG00000007618	PABPC1L	100	66.722	ENSXMAG00000017135	pabpc1l	94	66.327	Xiphophorus_maculatus