EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000007712 (Gene tree)
Gene ID: -
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 64002 bases
Position: chrGeneScaffold_2164:218776-282777
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000007297	Npa1	PF11707.8	6.8e-68	1	2
ENSTTRP00000007297	Npa1	PF11707.8	6.8e-68	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000007715	URB1-201	6567	-	ENSTTRP00000007297	2188 (aa)	-	UPI00018B6EE3

Gene Model

Click here to download ENSTTRG00000007712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000007712's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000007712	URB1	92	79.498	ENSG00000142207	URB1	91	79.289	Homo_sapiens
ENSTTRG00000007712	URB1	84	63.542	ENSAPOG00000020308	urb1	86	63.542	Acanthochromis_polyacanthus
ENSTTRG00000007712	URB1	92	82.827	ENSAMEG00000011998	URB1	90	82.827	Ailuropoda_melanoleuca
ENSTTRG00000007712	URB1	86	51.592	ENSACIG00000003248	urb1	88	51.592	Amphilophus_citrinellus
ENSTTRG00000007712	URB1	90	49.728	ENSAOCG00000010364	urb1	89	50.501	Amphiprion_ocellaris
ENSTTRG00000007712	URB1	89	51.111	ENSAPEG00000010758	urb1	90	50.945	Amphiprion_percula
ENSTTRG00000007712	URB1	91	49.284	ENSATEG00000011790	urb1	89	49.281	Anabas_testudineus
ENSTTRG00000007712	URB1	91	59.359	ENSAPLG00000012791	URB1	92	59.669	Anas_platyrhynchos
ENSTTRG00000007712	URB1	92	58.135	ENSACAG00000002817	URB1	89	58.031	Anolis_carolinensis
ENSTTRG00000007712	URB1	92	79.498	ENSANAG00000024617	URB1	91	79.289	Aotus_nancymaae
ENSTTRG00000007712	URB1	91	50.155	ENSACLG00000024865	urb1	90	50.155	Astatotilapia_calliptera
ENSTTRG00000007712	URB1	91	45.064	ENSAMXG00000012306	urb1	88	45.455	Astyanax_mexicanus
ENSTTRG00000007712	URB1	92	83.593	ENSBTAG00000012412	URB1	91	83.593	Bos_taurus
ENSTTRG00000007712	URB1	92	78.661	ENSCJAG00000009118	URB1	91	78.556	Callithrix_jacchus
ENSTTRG00000007712	URB1	92	82.017	ENSCAFG00000008892	URB1	91	82.017	Canis_familiaris
ENSTTRG00000007712	URB1	92	82.132	ENSCAFG00020025994	-	90	82.113	Canis_lupus_dingo
ENSTTRG00000007712	URB1	92	81.609	ENSCAFG00020025987	-	91	81.590	Canis_lupus_dingo
ENSTTRG00000007712	URB1	92	84.631	ENSCHIG00000015645	URB1	91	84.631	Capra_hircus
ENSTTRG00000007712	URB1	92	78.556	ENSTSYG00000013286	URB1	91	78.556	Carlito_syrichta
ENSTTRG00000007712	URB1	92	72.880	ENSCAPG00000015589	URB1	92	72.775	Cavia_aperea
ENSTTRG00000007712	URB1	92	77.720	ENSCPOG00000006748	URB1	91	77.615	Cavia_porcellus
ENSTTRG00000007712	URB1	92	79.267	ENSCCAG00000021299	URB1	91	79.372	Cebus_capucinus
ENSTTRG00000007712	URB1	92	79.707	ENSCATG00000042630	URB1	91	79.498	Cercocebus_atys
ENSTTRG00000007712	URB1	92	78.079	ENSCLAG00000005262	URB1	90	77.871	Chinchilla_lanigera
ENSTTRG00000007712	URB1	92	78.882	ENSCSAG00000009584	URB1	91	78.675	Chlorocebus_sabaeus
ENSTTRG00000007712	URB1	92	63.055	ENSCPBG00000006454	URB1	91	63.185	Chrysemys_picta_bellii
ENSTTRG00000007712	URB1	92	79.603	ENSCANG00000031088	URB1	91	79.393	Colobus_angolensis_palliatus
ENSTTRG00000007712	URB1	92	74.348	ENSCGRG00001010616	Urb1	91	73.931	Cricetulus_griseus_chok1gshd
ENSTTRG00000007712	URB1	92	74.348	ENSCGRG00000015840	Urb1	92	73.931	Cricetulus_griseus_crigri
ENSTTRG00000007712	URB1	86	65.882	ENSCSEG00000012616	urb1	84	65.882	Cynoglossus_semilaevis
ENSTTRG00000007712	URB1	84	50.335	ENSCVAG00000009076	urb1	88	50.335	Cyprinodon_variegatus
ENSTTRG00000007712	URB1	87	59.375	ENSDARG00000060308	urb1	86	59.375	Danio_rerio
ENSTTRG00000007712	URB1	77	76.360	ENSDNOG00000015586	URB1	89	76.151	Dasypus_novemcinctus
ENSTTRG00000007712	URB1	92	77.801	ENSDORG00000006735	Urb1	90	77.487	Dipodomys_ordii
ENSTTRG00000007712	URB1	81	73.956	ENSETEG00000009080	URB1	80	73.956	Echinops_telfairi
ENSTTRG00000007712	URB1	92	80.524	ENSEASG00005007711	URB1	91	80.524	Equus_asinus_asinus
ENSTTRG00000007712	URB1	92	82.827	ENSECAG00000013206	URB1	90	85.401	Equus_caballus
ENSTTRG00000007712	URB1	52	81.166	ENSEEUG00000003626	-	50	81.166	Erinaceus_europaeus
ENSTTRG00000007712	URB1	83	64.583	ENSELUG00000020516	urb1	85	64.583	Esox_lucius
ENSTTRG00000007712	URB1	92	82.094	ENSFCAG00000002177	URB1	91	82.094	Felis_catus
ENSTTRG00000007712	URB1	89	59.670	ENSFALG00000004636	URB1	90	59.670	Ficedula_albicollis
ENSTTRG00000007712	URB1	92	77.975	ENSFDAG00000007288	URB1	86	77.662	Fukomys_damarensis
ENSTTRG00000007712	URB1	85	56.863	ENSFHEG00000000202	urb1	84	56.863	Fundulus_heteroclitus
ENSTTRG00000007712	URB1	84	48.468	ENSGMOG00000001838	urb1	83	48.468	Gadus_morhua
ENSTTRG00000007712	URB1	92	60.247	ENSGALG00000015887	URB1	91	60.247	Gallus_gallus
ENSTTRG00000007712	URB1	89	49.504	ENSGAFG00000020694	urb1	88	50.279	Gambusia_affinis
ENSTTRG00000007712	URB1	91	49.538	ENSGACG00000011703	urb1	91	49.229	Gasterosteus_aculeatus
ENSTTRG00000007712	URB1	92	62.707	ENSGAGG00000022544	URB1	91	62.293	Gopherus_agassizii
ENSTTRG00000007712	URB1	92	79.603	ENSGGOG00000000285	URB1	91	79.393	Gorilla_gorilla
ENSTTRG00000007712	URB1	91	50.363	ENSHBUG00000001904	urb1	90	50.363	Haplochromis_burtoni
ENSTTRG00000007712	URB1	92	75.329	ENSHGLG00000004907	URB1	91	75.126	Heterocephalus_glaber_female
ENSTTRG00000007712	URB1	92	77.685	ENSHGLG00100010749	URB1	90	77.477	Heterocephalus_glaber_male
ENSTTRG00000007712	URB1	63	49.787	ENSHCOG00000018683	urb1	87	50.851	Hippocampus_comes
ENSTTRG00000007712	URB1	90	45.356	ENSIPUG00000014721	urb1	88	45.865	Ictalurus_punctatus
ENSTTRG00000007712	URB1	92	79.854	ENSSTOG00000004539	URB1	90	79.541	Ictidomys_tridecemlineatus
ENSTTRG00000007712	URB1	91	48.133	ENSKMAG00000006001	urb1	87	51.823	Kryptolebias_marmoratus
ENSTTRG00000007712	URB1	84	50.000	ENSLBEG00000027208	urb1	88	49.779	Labrus_bergylta
ENSTTRG00000007712	URB1	92	52.513	ENSLACG00000017059	URB1	91	52.308	Latimeria_chalumnae
ENSTTRG00000007712	URB1	91	54.006	ENSLOCG00000009190	urb1	90	53.597	Lepisosteus_oculatus
ENSTTRG00000007712	URB1	92	78.766	ENSLAFG00000010407	URB1	90	78.556	Loxodonta_africana
ENSTTRG00000007712	URB1	92	79.498	ENSMFAG00000034391	URB1	88	79.289	Macaca_fascicularis
ENSTTRG00000007712	URB1	92	79.498	ENSMMUG00000010295	URB1	91	79.289	Macaca_mulatta
ENSTTRG00000007712	URB1	92	76.594	ENSMNEG00000032981	URB1	91	76.385	Macaca_nemestrina
ENSTTRG00000007712	URB1	92	79.603	ENSMLEG00000041435	URB1	91	79.393	Mandrillus_leucophaeus
ENSTTRG00000007712	URB1	91	49.378	ENSMAMG00000011238	urb1	87	50.717	Mastacembelus_armatus
ENSTTRG00000007712	URB1	86	67.708	ENSMZEG00005011862	urb1	88	67.708	Maylandia_zebra
ENSTTRG00000007712	URB1	92	59.979	ENSMGAG00000014512	URB1	92	59.979	Meleagris_gallopavo
ENSTTRG00000007712	URB1	86	77.080	ENSMAUG00000010516	Urb1	90	77.080	Mesocricetus_auratus
ENSTTRG00000007712	URB1	92	79.372	ENSMICG00000016424	URB1	91	79.162	Microcebus_murinus
ENSTTRG00000007712	URB1	92	75.079	ENSMOCG00000012613	Urb1	90	75.079	Microtus_ochrogaster
ENSTTRG00000007712	URB1	92	65.031	ENSMODG00000021076	URB1	91	65.031	Monodelphis_domestica
ENSTTRG00000007712	URB1	85	50.332	ENSMALG00000017411	urb1	87	50.332	Monopterus_albus
ENSTTRG00000007712	URB1	92	74.426	MGP_CAROLIEiJ_G0020948	Urb1	90	74.008	Mus_caroli
ENSTTRG00000007712	URB1	92	74.843	ENSMUSG00000039929	Urb1	90	74.739	Mus_musculus
ENSTTRG00000007712	URB1	92	74.530	MGP_PahariEiJ_G0016653	Urb1	90	74.113	Mus_pahari
ENSTTRG00000007712	URB1	92	74.426	MGP_SPRETEiJ_G0021854	Urb1	90	74.113	Mus_spretus
ENSTTRG00000007712	URB1	92	81.675	ENSMPUG00000001123	URB1	90	81.675	Mustela_putorius_furo
ENSTTRG00000007712	URB1	92	73.563	ENSNGAG00000001905	Urb1	90	73.354	Nannospalax_galili
ENSTTRG00000007712	URB1	75	49.948	ENSNBRG00000001049	urb1	88	49.896	Neolamprologus_brichardi
ENSTTRG00000007712	URB1	92	78.452	ENSNLEG00000026872	URB1	91	78.556	Nomascus_leucogenys
ENSTTRG00000007712	URB1	86	61.702	ENSMEUG00000010828	URB1	86	57.966	Notamacropus_eugenii
ENSTTRG00000007712	URB1	92	74.322	ENSOPRG00000013482	URB1	91	74.113	Ochotona_princeps
ENSTTRG00000007712	URB1	92	77.766	ENSODEG00000002587	URB1	90	77.557	Octodon_degus
ENSTTRG00000007712	URB1	91	50.311	ENSONIG00000005599	urb1	90	50.311	Oreochromis_niloticus
ENSTTRG00000007712	URB1	92	78.407	ENSOCUG00000009381	URB1	90	78.197	Oryctolagus_cuniculus
ENSTTRG00000007712	URB1	91	50.729	ENSORLG00000003429	urb1	90	50.729	Oryzias_latipes
ENSTTRG00000007712	URB1	91	50.625	ENSORLG00020013785	urb1	92	49.288	Oryzias_latipes_hni
ENSTTRG00000007712	URB1	86	64.583	ENSORLG00015019421	urb1	88	64.583	Oryzias_latipes_hsok
ENSTTRG00000007712	URB1	74	48.910	ENSOMEG00000002094	urb1	91	48.910	Oryzias_melastigma
ENSTTRG00000007712	URB1	92	80.000	ENSOGAG00000017140	URB1	91	79.686	Otolemur_garnettii
ENSTTRG00000007712	URB1	92	82.202	ENSOARG00000013679	URB1	94	81.959	Ovis_aries
ENSTTRG00000007712	URB1	92	79.707	ENSPPAG00000003423	URB1	91	79.498	Pan_paniscus
ENSTTRG00000007712	URB1	92	82.094	ENSPPRG00000023131	URB1	91	82.094	Panthera_pardus
ENSTTRG00000007712	URB1	85	78.579	ENSPTIG00000016125	URB1	89	78.579	Panthera_tigris_altaica
ENSTTRG00000007712	URB1	92	79.498	ENSPTRG00000013852	URB1	91	79.289	Pan_troglodytes
ENSTTRG00000007712	URB1	92	79.707	ENSPANG00000021964	URB1	91	79.498	Papio_anubis
ENSTTRG00000007712	URB1	92	50.883	ENSPKIG00000003683	urb1	87	52.428	Paramormyrops_kingsleyae
ENSTTRG00000007712	URB1	92	74.528	ENSPEMG00000021205	Urb1	90	74.528	Peromyscus_maniculatus_bairdii
ENSTTRG00000007712	URB1	71	36.395	ENSPMAG00000009733	URB1	87	36.671	Petromyzon_marinus
ENSTTRG00000007712	URB1	92	65.485	ENSPCIG00000016350	URB1	91	65.485	Phascolarctos_cinereus
ENSTTRG00000007712	URB1	90	48.077	ENSPLAG00000004371	urb1	89	49.886	Poecilia_latipinna
ENSTTRG00000007712	URB1	91	49.791	ENSPMEG00000006634	urb1	90	49.687	Poecilia_mexicana
ENSTTRG00000007712	URB1	90	49.426	ENSPREG00000013453	urb1	89	49.426	Poecilia_reticulata
ENSTTRG00000007712	URB1	92	79.184	ENSPPYG00000011359	URB1	91	78.975	Pongo_abelii
ENSTTRG00000007712	URB1	92	65.625	ENSPCAG00000007430	URB1	90	65.586	Procavia_capensis
ENSTTRG00000007712	URB1	92	80.419	ENSPCOG00000022695	URB1	91	80.524	Propithecus_coquereli
ENSTTRG00000007712	URB1	92	80.524	ENSPVAG00000000889	URB1	90	80.524	Pteropus_vampyrus
ENSTTRG00000007712	URB1	90	49.840	ENSPNYG00000010589	urb1	88	50.604	Pundamilia_nyererei
ENSTTRG00000007712	URB1	92	43.988	ENSPNAG00000019324	urb1	88	45.464	Pygocentrus_nattereri
ENSTTRG00000007712	URB1	92	74.113	ENSRNOG00000002080	Urb1	90	73.695	Rattus_norvegicus
ENSTTRG00000007712	URB1	92	79.184	ENSRBIG00000033122	URB1	91	78.975	Rhinopithecus_bieti
ENSTTRG00000007712	URB1	92	79.184	ENSRROG00000040237	URB1	91	78.975	Rhinopithecus_roxellana
ENSTTRG00000007712	URB1	92	79.393	ENSSBOG00000027672	URB1	91	79.184	Saimiri_boliviensis_boliviensis
ENSTTRG00000007712	URB1	92	65.557	ENSSHAG00000005140	URB1	91	65.557	Sarcophilus_harrisii
ENSTTRG00000007712	URB1	84	50.949	ENSSFOG00015000339	urb1	88	51.371	Scleropages_formosus
ENSTTRG00000007712	URB1	90	49.542	ENSSMAG00000003782	urb1	90	49.643	Scophthalmus_maximus
ENSTTRG00000007712	URB1	91	50.310	ENSSDUG00000012313	urb1	88	51.475	Seriola_dumerili
ENSTTRG00000007712	URB1	91	49.897	ENSSLDG00000023179	urb1	88	51.148	Seriola_lalandi_dorsalis
ENSTTRG00000007712	URB1	92	60.412	ENSSPUG00000012447	URB1	90	60.309	Sphenodon_punctatus
ENSTTRG00000007712	URB1	87	62.500	ENSSPAG00000006325	urb1	88	62.500	Stegastes_partitus
ENSTTRG00000007712	URB1	92	83.299	ENSSSCG00000032024	URB1	90	83.299	Sus_scrofa
ENSTTRG00000007712	URB1	67	58.096	ENSTGUG00000013442	URB1	89	58.096	Taeniopygia_guttata
ENSTTRG00000007712	URB1	92	47.472	ENSTRUG00000009372	urb1	88	48.690	Takifugu_rubripes
ENSTTRG00000007712	URB1	92	48.444	ENSTNIG00000016277	urb1	89	49.945	Tetraodon_nigroviridis
ENSTTRG00000007712	URB1	67	93.478	ENSTBEG00000010044	URB1	66	93.478	Tupaia_belangeri
ENSTTRG00000007712	URB1	92	83.141	ENSUAMG00000012231	URB1	90	83.141	Ursus_americanus
ENSTTRG00000007712	URB1	85	82.723	ENSUMAG00000017419	URB1	90	82.723	Ursus_maritimus
ENSTTRG00000007712	URB1	59	93.478	ENSVPAG00000001164	URB1	57	93.478	Vicugna_pacos
ENSTTRG00000007712	URB1	92	81.439	ENSVVUG00000000551	URB1	91	81.420	Vulpes_vulpes
ENSTTRG00000007712	URB1	92	54.021	ENSXETG00000009895	urb1	90	53.878	Xenopus_tropicalis
ENSTTRG00000007712	URB1	85	64.516	ENSXCOG00000005500	urb1	86	64.516	Xiphophorus_couchianus
ENSTTRG00000007712	URB1	85	65.591	ENSXMAG00000007253	urb1	87	65.591	Xiphophorus_maculatus