EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000007860 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 851 bases
Position: chrGeneScaffold_3136:29699-30549
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000007430	Exo_endo_phos	PF03372.23	3.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000007855	APEX1-201	708	-	ENSTTRP00000007430	235 (aa)	-	UPI00018B5C25

Gene Model

Click here to download ENSTTRG00000007860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000007860's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000007860	APEX1	100	95.339	ENSG00000100823	APEX1	74	95.339	Homo_sapiens
ENSTTRG00000007860	APEX1	100	68.511	ENSAPOG00000017002	apex1	77	68.511	Acanthochromis_polyacanthus
ENSTTRG00000007860	APEX1	100	97.034	ENSAMEG00000005418	APEX1	74	97.034	Ailuropoda_melanoleuca
ENSTTRG00000007860	APEX1	100	70.638	ENSACIG00000010653	apex1	79	70.638	Amphilophus_citrinellus
ENSTTRG00000007860	APEX1	100	68.511	ENSAOCG00000009649	apex1	76	68.511	Amphiprion_ocellaris
ENSTTRG00000007860	APEX1	100	68.511	ENSAPEG00000021453	apex1	76	68.511	Amphiprion_percula
ENSTTRG00000007860	APEX1	99	69.658	ENSATEG00000002883	apex1	74	69.658	Anabas_testudineus
ENSTTRG00000007860	APEX1	100	73.617	ENSACAG00000008099	APEX1	74	73.617	Anolis_carolinensis
ENSTTRG00000007860	APEX1	100	95.339	ENSANAG00000030117	APEX1	74	95.339	Aotus_nancymaae
ENSTTRG00000007860	APEX1	100	70.213	ENSACLG00000018441	apex1	76	70.213	Astatotilapia_calliptera
ENSTTRG00000007860	APEX1	100	68.085	ENSAMXG00000034699	apex1	75	68.085	Astyanax_mexicanus
ENSTTRG00000007860	APEX1	100	97.034	ENSBTAG00000002745	APEX1	74	97.034	Bos_taurus
ENSTTRG00000007860	APEX1	97	42.424	WBGene00001372	exo-3	79	42.424	Caenorhabditis_elegans
ENSTTRG00000007860	APEX1	100	95.763	ENSCJAG00000009726	APEX1	74	95.763	Callithrix_jacchus
ENSTTRG00000007860	APEX1	100	95.763	ENSCAFG00000032033	APEX1	74	95.763	Canis_familiaris
ENSTTRG00000007860	APEX1	100	95.763	ENSCAFG00020014377	-	74	95.763	Canis_lupus_dingo
ENSTTRG00000007860	APEX1	100	77.542	ENSCHIG00000014537	-	74	77.542	Capra_hircus
ENSTTRG00000007860	APEX1	100	96.186	ENSCHIG00000007298	-	74	96.186	Capra_hircus
ENSTTRG00000007860	APEX1	100	95.339	ENSTSYG00000034813	APEX1	74	95.339	Carlito_syrichta
ENSTTRG00000007860	APEX1	100	95.339	ENSCAPG00000016235	APEX1	91	95.339	Cavia_aperea
ENSTTRG00000007860	APEX1	100	95.339	ENSCPOG00000030909	APEX1	74	95.339	Cavia_porcellus
ENSTTRG00000007860	APEX1	100	95.763	ENSCCAG00000033056	-	74	95.763	Cebus_capucinus
ENSTTRG00000007860	APEX1	100	81.356	ENSCCAG00000031931	-	76	81.356	Cebus_capucinus
ENSTTRG00000007860	APEX1	100	94.915	ENSCATG00000015580	APEX1	74	94.915	Cercocebus_atys
ENSTTRG00000007860	APEX1	100	94.492	ENSCLAG00000001002	APEX1	74	94.492	Chinchilla_lanigera
ENSTTRG00000007860	APEX1	100	94.492	ENSCSAG00000016670	-	74	94.492	Chlorocebus_sabaeus
ENSTTRG00000007860	APEX1	100	94.492	ENSCSAG00000016685	-	74	94.492	Chlorocebus_sabaeus
ENSTTRG00000007860	APEX1	100	72.766	ENSCPBG00000009567	APEX1	74	72.766	Chrysemys_picta_bellii
ENSTTRG00000007860	APEX1	100	59.149	ENSCING00000008137	-	75	59.149	Ciona_intestinalis
ENSTTRG00000007860	APEX1	100	50.213	ENSCSAVG00000007144	-	92	49.789	Ciona_savignyi
ENSTTRG00000007860	APEX1	100	95.339	ENSCANG00000030726	APEX1	74	95.339	Colobus_angolensis_palliatus
ENSTTRG00000007860	APEX1	100	93.220	ENSCGRG00001017046	Apex1	74	93.220	Cricetulus_griseus_chok1gshd
ENSTTRG00000007860	APEX1	100	93.220	ENSCGRG00000008984	Apex1	74	93.220	Cricetulus_griseus_crigri
ENSTTRG00000007860	APEX1	100	66.383	ENSCSEG00000017499	apex1	76	66.383	Cynoglossus_semilaevis
ENSTTRG00000007860	APEX1	100	70.638	ENSCVAG00000022075	apex1	76	70.638	Cyprinodon_variegatus
ENSTTRG00000007860	APEX1	100	69.787	ENSDARG00000045843	apex1	76	69.787	Danio_rerio
ENSTTRG00000007860	APEX1	100	90.254	ENSDNOG00000042234	APEX1	70	90.254	Dasypus_novemcinctus
ENSTTRG00000007860	APEX1	100	95.339	ENSDORG00000001616	Apex1	74	95.339	Dipodomys_ordii
ENSTTRG00000007860	APEX1	100	94.068	ENSETEG00000004855	-	74	94.068	Echinops_telfairi
ENSTTRG00000007860	APEX1	100	62.712	ENSEBUG00000000622	-	91	62.712	Eptatretus_burgeri
ENSTTRG00000007860	APEX1	100	96.610	ENSEASG00005017489	APEX1	55	96.610	Equus_asinus_asinus
ENSTTRG00000007860	APEX1	100	96.610	ENSECAG00000022325	APEX1	61	96.610	Equus_caballus
ENSTTRG00000007860	APEX1	96	94.248	ENSEEUG00000012569	APEX1	78	94.248	Erinaceus_europaeus
ENSTTRG00000007860	APEX1	100	68.511	ENSELUG00000021706	apex1	75	68.511	Esox_lucius
ENSTTRG00000007860	APEX1	100	95.763	ENSFCAG00000030869	APEX1	74	95.763	Felis_catus
ENSTTRG00000007860	APEX1	100	94.492	ENSFDAG00000006120	APEX1	74	94.492	Fukomys_damarensis
ENSTTRG00000007860	APEX1	100	71.489	ENSFHEG00000009031	apex1	63	71.489	Fundulus_heteroclitus
ENSTTRG00000007860	APEX1	100	65.106	ENSGMOG00000007943	apex1	75	65.106	Gadus_morhua
ENSTTRG00000007860	APEX1	100	71.064	ENSGAFG00000005311	apex1	76	71.064	Gambusia_affinis
ENSTTRG00000007860	APEX1	100	68.511	ENSGACG00000019497	apex1	88	68.511	Gasterosteus_aculeatus
ENSTTRG00000007860	APEX1	100	72.766	ENSGAGG00000014999	APEX1	74	72.766	Gopherus_agassizii
ENSTTRG00000007860	APEX1	100	95.339	ENSGGOG00000002128	APEX1	74	95.339	Gorilla_gorilla
ENSTTRG00000007860	APEX1	100	69.787	ENSHBUG00000005894	apex1	76	69.787	Haplochromis_burtoni
ENSTTRG00000007860	APEX1	100	96.186	ENSHGLG00000002848	APEX1	74	96.186	Heterocephalus_glaber_female
ENSTTRG00000007860	APEX1	100	96.186	ENSHGLG00100017878	APEX1	74	96.186	Heterocephalus_glaber_male
ENSTTRG00000007860	APEX1	100	69.362	ENSHCOG00000009961	apex1	76	69.362	Hippocampus_comes
ENSTTRG00000007860	APEX1	100	68.936	ENSIPUG00000005799	apex1	76	68.936	Ictalurus_punctatus
ENSTTRG00000007860	APEX1	100	94.068	ENSSTOG00000010096	APEX1	74	94.068	Ictidomys_tridecemlineatus
ENSTTRG00000007860	APEX1	100	81.780	ENSJJAG00000020465	-	75	81.780	Jaculus_jaculus
ENSTTRG00000007860	APEX1	100	94.068	ENSJJAG00000012067	-	74	94.068	Jaculus_jaculus
ENSTTRG00000007860	APEX1	100	84.322	ENSJJAG00000003660	-	74	84.322	Jaculus_jaculus
ENSTTRG00000007860	APEX1	100	69.787	ENSKMAG00000021171	apex1	76	69.787	Kryptolebias_marmoratus
ENSTTRG00000007860	APEX1	100	66.383	ENSLBEG00000010248	apex1	76	66.383	Labrus_bergylta
ENSTTRG00000007860	APEX1	100	68.511	ENSLACG00000008617	APEX1	75	68.511	Latimeria_chalumnae
ENSTTRG00000007860	APEX1	100	69.787	ENSLOCG00000015516	apex1	74	69.787	Lepisosteus_oculatus
ENSTTRG00000007860	APEX1	100	94.068	ENSLAFG00000021872	APEX1	74	94.068	Loxodonta_africana
ENSTTRG00000007860	APEX1	100	94.915	ENSMFAG00000002565	APEX1	74	94.915	Macaca_fascicularis
ENSTTRG00000007860	APEX1	100	94.915	ENSMMUG00000048039	APEX1	74	94.915	Macaca_mulatta
ENSTTRG00000007860	APEX1	100	94.915	ENSMNEG00000036944	APEX1	74	94.915	Macaca_nemestrina
ENSTTRG00000007860	APEX1	100	94.915	ENSMLEG00000042125	APEX1	74	94.915	Mandrillus_leucophaeus
ENSTTRG00000007860	APEX1	100	69.787	ENSMAMG00000023526	apex1	76	69.787	Mastacembelus_armatus
ENSTTRG00000007860	APEX1	100	70.213	ENSMZEG00005014187	apex1	76	70.213	Maylandia_zebra
ENSTTRG00000007860	APEX1	100	93.644	ENSMAUG00000013994	Apex1	75	93.644	Mesocricetus_auratus
ENSTTRG00000007860	APEX1	100	96.186	ENSMICG00000043554	APEX1	74	96.186	Microcebus_murinus
ENSTTRG00000007860	APEX1	100	93.220	ENSMOCG00000013721	Apex1	74	93.220	Microtus_ochrogaster
ENSTTRG00000007860	APEX1	100	65.957	ENSMMOG00000010031	apex1	74	65.957	Mola_mola
ENSTTRG00000007860	APEX1	100	89.407	ENSMODG00000007125	APEX1	74	89.407	Monodelphis_domestica
ENSTTRG00000007860	APEX1	100	61.702	ENSMALG00000011699	apex1	62	61.702	Monopterus_albus
ENSTTRG00000007860	APEX1	99	93.617	MGP_CAROLIEiJ_G0019209	Apex1	74	93.617	Mus_caroli
ENSTTRG00000007860	APEX1	100	94.915	ENSMUSG00000035960	Apex1	74	94.915	Mus_musculus
ENSTTRG00000007860	APEX1	100	94.492	MGP_PahariEiJ_G0030232	Apex1	74	94.492	Mus_pahari
ENSTTRG00000007860	APEX1	100	94.915	MGP_SPRETEiJ_G0020101	Apex1	74	94.915	Mus_spretus
ENSTTRG00000007860	APEX1	100	96.186	ENSMLUG00000028957	APEX1	74	96.186	Myotis_lucifugus
ENSTTRG00000007860	APEX1	100	94.915	ENSNGAG00000002725	-	74	94.915	Nannospalax_galili
ENSTTRG00000007860	APEX1	83	73.604	ENSNGAG00000021748	-	57	73.604	Nannospalax_galili
ENSTTRG00000007860	APEX1	100	69.787	ENSNBRG00000005334	apex1	69	69.787	Neolamprologus_brichardi
ENSTTRG00000007860	APEX1	100	95.339	ENSNLEG00000010839	APEX1	75	95.339	Nomascus_leucogenys
ENSTTRG00000007860	APEX1	100	90.254	ENSMEUG00000014519	APEX1	75	90.254	Notamacropus_eugenii
ENSTTRG00000007860	APEX1	100	94.915	ENSOPRG00000014029	APEX1	74	94.915	Ochotona_princeps
ENSTTRG00000007860	APEX1	100	95.763	ENSODEG00000001703	-	74	95.763	Octodon_degus
ENSTTRG00000007860	APEX1	96	81.498	ENSODEG00000004777	-	76	81.498	Octodon_degus
ENSTTRG00000007860	APEX1	100	72.034	ENSODEG00000006583	-	73	72.034	Octodon_degus
ENSTTRG00000007860	APEX1	100	70.213	ENSONIG00000012089	apex1	76	70.213	Oreochromis_niloticus
ENSTTRG00000007860	APEX1	100	83.051	ENSOANG00000008836	APEX1	59	83.051	Ornithorhynchus_anatinus
ENSTTRG00000007860	APEX1	100	95.763	ENSOCUG00000005022	APEX1	74	95.763	Oryctolagus_cuniculus
ENSTTRG00000007860	APEX1	100	70.213	ENSORLG00000012378	apex1	76	70.213	Oryzias_latipes
ENSTTRG00000007860	APEX1	100	70.213	ENSORLG00020021371	apex1	76	70.213	Oryzias_latipes_hni
ENSTTRG00000007860	APEX1	100	70.213	ENSORLG00015020089	apex1	76	70.213	Oryzias_latipes_hsok
ENSTTRG00000007860	APEX1	100	69.362	ENSOMEG00000018876	apex1	76	69.362	Oryzias_melastigma
ENSTTRG00000007860	APEX1	100	94.492	ENSOGAG00000013335	-	74	94.492	Otolemur_garnettii
ENSTTRG00000007860	APEX1	100	82.083	ENSOGAG00000029355	-	76	82.083	Otolemur_garnettii
ENSTTRG00000007860	APEX1	100	80.508	ENSOARG00000014424	-	75	80.508	Ovis_aries
ENSTTRG00000007860	APEX1	96	92.035	ENSOARG00000001876	-	73	92.035	Ovis_aries
ENSTTRG00000007860	APEX1	100	94.915	ENSOARG00000019740	-	74	94.915	Ovis_aries
ENSTTRG00000007860	APEX1	100	95.763	ENSPPAG00000038760	APEX1	75	95.763	Pan_paniscus
ENSTTRG00000007860	APEX1	100	95.763	ENSPPRG00000011794	APEX1	74	95.763	Panthera_pardus
ENSTTRG00000007860	APEX1	100	95.763	ENSPTIG00000014829	APEX1	74	95.763	Panthera_tigris_altaica
ENSTTRG00000007860	APEX1	100	95.763	ENSPTRG00000006093	APEX1	75	95.763	Pan_troglodytes
ENSTTRG00000007860	APEX1	100	94.915	ENSPANG00000022757	APEX1	74	94.915	Papio_anubis
ENSTTRG00000007860	APEX1	100	67.234	ENSPKIG00000003504	apex1	75	67.234	Paramormyrops_kingsleyae
ENSTTRG00000007860	APEX1	100	66.383	ENSPMGG00000016596	apex1	71	66.383	Periophthalmus_magnuspinnatus
ENSTTRG00000007860	APEX1	100	94.068	ENSPEMG00000019097	Apex1	74	94.068	Peromyscus_maniculatus_bairdii
ENSTTRG00000007860	APEX1	100	67.797	ENSPMAG00000007275	-	80	67.797	Petromyzon_marinus
ENSTTRG00000007860	APEX1	100	88.983	ENSPCIG00000023274	APEX1	74	88.983	Phascolarctos_cinereus
ENSTTRG00000007860	APEX1	100	71.489	ENSPFOG00000004178	apex1	76	71.489	Poecilia_formosa
ENSTTRG00000007860	APEX1	100	71.489	ENSPLAG00000012779	apex1	76	71.489	Poecilia_latipinna
ENSTTRG00000007860	APEX1	100	71.489	ENSPMEG00000019623	apex1	76	71.489	Poecilia_mexicana
ENSTTRG00000007860	APEX1	100	71.064	ENSPREG00000014298	apex1	76	71.064	Poecilia_reticulata
ENSTTRG00000007860	APEX1	100	94.915	ENSPPYG00000005565	APEX1	74	94.915	Pongo_abelii
ENSTTRG00000007860	APEX1	100	91.525	ENSPCAG00000010376	APEX1	74	91.525	Procavia_capensis
ENSTTRG00000007860	APEX1	100	95.339	ENSPCOG00000021564	APEX1	74	95.339	Propithecus_coquereli
ENSTTRG00000007860	APEX1	100	95.763	ENSPVAG00000010736	APEX1	74	95.763	Pteropus_vampyrus
ENSTTRG00000007860	APEX1	100	70.213	ENSPNYG00000023940	apex1	76	70.213	Pundamilia_nyererei
ENSTTRG00000007860	APEX1	90	66.509	ENSPNAG00000020897	apex1	71	66.351	Pygocentrus_nattereri
ENSTTRG00000007860	APEX1	100	94.068	ENSRNOG00000009663	Apex1	74	94.068	Rattus_norvegicus
ENSTTRG00000007860	APEX1	100	94.915	ENSRBIG00000038325	APEX1	73	94.915	Rhinopithecus_bieti
ENSTTRG00000007860	APEX1	100	82.627	ENSSBOG00000031372	-	76	82.627	Saimiri_boliviensis_boliviensis
ENSTTRG00000007860	APEX1	100	95.763	ENSSBOG00000018921	-	74	95.763	Saimiri_boliviensis_boliviensis
ENSTTRG00000007860	APEX1	100	89.407	ENSSHAG00000013524	APEX1	73	89.407	Sarcophilus_harrisii
ENSTTRG00000007860	APEX1	100	64.681	ENSSFOG00015001948	apex1	76	64.681	Scleropages_formosus
ENSTTRG00000007860	APEX1	100	67.660	ENSSMAG00000013348	apex1	75	67.660	Scophthalmus_maximus
ENSTTRG00000007860	APEX1	100	67.660	ENSSDUG00000016377	apex1	76	67.660	Seriola_dumerili
ENSTTRG00000007860	APEX1	100	68.511	ENSSLDG00000023005	apex1	76	68.511	Seriola_lalandi_dorsalis
ENSTTRG00000007860	APEX1	99	71.368	ENSSPUG00000000531	APEX1	79	71.368	Sphenodon_punctatus
ENSTTRG00000007860	APEX1	100	68.511	ENSSPAG00000000458	apex1	77	68.511	Stegastes_partitus
ENSTTRG00000007860	APEX1	100	96.186	ENSSSCG00000040060	-	74	96.186	Sus_scrofa
ENSTTRG00000007860	APEX1	100	60.331	ENSSSCG00000039705	-	79	60.331	Sus_scrofa
ENSTTRG00000007860	APEX1	100	58.723	ENSTGUG00000014378	APEX1	100	58.723	Taeniopygia_guttata
ENSTTRG00000007860	APEX1	100	65.532	ENSTRUG00000004268	apex1	71	65.532	Takifugu_rubripes
ENSTTRG00000007860	APEX1	100	66.383	ENSTNIG00000005778	apex1	76	66.383	Tetraodon_nigroviridis
ENSTTRG00000007860	APEX1	99	91.064	ENSTBEG00000006405	APEX1	74	91.064	Tupaia_belangeri
ENSTTRG00000007860	APEX1	100	97.034	ENSUAMG00000010457	APEX1	74	97.034	Ursus_americanus
ENSTTRG00000007860	APEX1	100	97.034	ENSUMAG00000009178	APEX1	74	97.034	Ursus_maritimus
ENSTTRG00000007860	APEX1	100	89.407	ENSVPAG00000005083	APEX1	100	89.407	Vicugna_pacos
ENSTTRG00000007860	APEX1	100	95.339	ENSVVUG00000009010	APEX1	74	95.339	Vulpes_vulpes
ENSTTRG00000007860	APEX1	100	66.383	ENSXETG00000024773	apex1	74	66.383	Xenopus_tropicalis
ENSTTRG00000007860	APEX1	100	71.064	ENSXCOG00000015233	apex1	76	71.064	Xiphophorus_couchianus
ENSTTRG00000007860	APEX1	100	71.064	ENSXMAG00000006195	apex1	76	71.064	Xiphophorus_maculatus