EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000008045 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 15139 bases
Position: chrscaffold_94587:20721-35859
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000007616	CSD	PF00313.22	6.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000008049	YBX3-201	795	-	ENSTTRP00000007616	264 (aa)	-	UPI00018B5167

Gene Model

Click here to download ENSTTRG00000008045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000008045's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000008045	YBX3	100	46.154	ENSTTRG00000001353	-	78	48.689

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000008045	YBX3	100	84.586	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSTTRG00000008045	YBX3	100	86.090	ENSAMEG00000009393	YBX3	75	85.714	Ailuropoda_melanoleuca
ENSTTRG00000008045	YBX3	100	61.852	ENSAPLG00000003147	YBX3	92	58.303	Anas_platyrhynchos
ENSTTRG00000008045	YBX3	100	84.962	ENSANAG00000024492	-	83	84.962	Aotus_nancymaae
ENSTTRG00000008045	YBX3	100	86.842	ENSBTAG00000009663	YBX3	68	82.692	Bos_taurus
ENSTTRG00000008045	YBX3	100	84.962	ENSCJAG00000021660	-	71	84.962	Callithrix_jacchus
ENSTTRG00000008045	YBX3	59	90.667	ENSCJAG00000033824	-	57	90.667	Callithrix_jacchus
ENSTTRG00000008045	YBX3	100	86.090	ENSCAFG00000013401	YBX3	77	85.366	Canis_familiaris
ENSTTRG00000008045	YBX3	96	85.882	ENSCAFG00020006412	YBX3	71	83.206	Canis_lupus_dingo
ENSTTRG00000008045	YBX3	100	87.218	ENSCHIG00000010863	YBX3	73	86.466	Capra_hircus
ENSTTRG00000008045	YBX3	100	48.106	ENSTSYG00000035821	-	62	95.312	Carlito_syrichta
ENSTTRG00000008045	YBX3	100	86.090	ENSTSYG00000004204	-	80	86.090	Carlito_syrichta
ENSTTRG00000008045	YBX3	100	80.827	ENSCAPG00000015039	YBX3	85	81.203	Cavia_aperea
ENSTTRG00000008045	YBX3	100	80.827	ENSCPOG00000011329	YBX3	77	81.203	Cavia_porcellus
ENSTTRG00000008045	YBX3	100	84.586	ENSCCAG00000016469	YBX3	71	84.586	Cebus_capucinus
ENSTTRG00000008045	YBX3	100	83.835	ENSCATG00000034411	YBX3	71	83.835	Cercocebus_atys
ENSTTRG00000008045	YBX3	100	81.955	ENSCLAG00000016030	YBX3	86	82.331	Chinchilla_lanigera
ENSTTRG00000008045	YBX3	100	84.211	ENSCSAG00000008744	YBX3	71	84.211	Chlorocebus_sabaeus
ENSTTRG00000008045	YBX3	100	72.659	ENSCPBG00000014147	YBX3	73	72.659	Chrysemys_picta_bellii
ENSTTRG00000008045	YBX3	100	84.211	ENSCANG00000036801	YBX3	83	84.211	Colobus_angolensis_palliatus
ENSTTRG00000008045	YBX3	100	83.835	ENSCGRG00001016148	Ybx3	72	82.707	Cricetulus_griseus_chok1gshd
ENSTTRG00000008045	YBX3	100	83.835	ENSCGRG00000004563	Ybx3	88	82.707	Cricetulus_griseus_crigri
ENSTTRG00000008045	YBX3	100	83.459	ENSDORG00000009103	Ybx3	74	83.083	Dipodomys_ordii
ENSTTRG00000008045	YBX3	100	75.746	ENSETEG00000002557	YBX3	92	74.060	Echinops_telfairi
ENSTTRG00000008045	YBX3	96	85.771	ENSEASG00005014726	YBX3	71	81.923	Equus_asinus_asinus
ENSTTRG00000008045	YBX3	96	86.667	ENSECAG00000013777	YBX3	71	83.969	Equus_caballus
ENSTTRG00000008045	YBX3	100	84.211	ENSEEUG00000010415	YBX3	93	84.211	Erinaceus_europaeus
ENSTTRG00000008045	YBX3	100	86.842	ENSFCAG00000027748	YBX3	70	86.842	Felis_catus
ENSTTRG00000008045	YBX3	100	62.406	ENSFALG00000003661	YBX3	92	62.406	Ficedula_albicollis
ENSTTRG00000008045	YBX3	100	81.203	ENSFDAG00000021192	YBX3	84	78.571	Fukomys_damarensis
ENSTTRG00000008045	YBX3	92	72.727	ENSGALG00000031890	YBX3	66	66.429	Gallus_gallus
ENSTTRG00000008045	YBX3	100	71.161	ENSGAGG00000017780	YBX3	73	71.161	Gopherus_agassizii
ENSTTRG00000008045	YBX3	100	84.586	ENSGGOG00000001352	YBX3	71	84.586	Gorilla_gorilla
ENSTTRG00000008045	YBX3	100	73.034	ENSHGLG00000014798	-	77	71.698	Heterocephalus_glaber_female
ENSTTRG00000008045	YBX3	92	74.390	ENSHGLG00000015495	-	62	65.000	Heterocephalus_glaber_female
ENSTTRG00000008045	YBX3	71	100.000	ENSHGLG00100003589	YBX3	78	59.551	Heterocephalus_glaber_male
ENSTTRG00000008045	YBX3	100	81.955	ENSSTOG00000032577	-	74	79.167	Ictidomys_tridecemlineatus
ENSTTRG00000008045	YBX3	100	78.195	ENSSTOG00000002108	-	80	77.820	Ictidomys_tridecemlineatus
ENSTTRG00000008045	YBX3	98	63.462	ENSJJAG00000014239	Ybx3	79	78.571	Jaculus_jaculus
ENSTTRG00000008045	YBX3	100	85.714	ENSLAFG00000017247	YBX3	78	84.211	Loxodonta_africana
ENSTTRG00000008045	YBX3	100	84.211	ENSMFAG00000039369	YBX3	71	84.211	Macaca_fascicularis
ENSTTRG00000008045	YBX3	100	84.211	ENSMMUG00000022469	YBX3	81	84.211	Macaca_mulatta
ENSTTRG00000008045	YBX3	100	84.211	ENSMNEG00000045109	YBX3	71	84.211	Macaca_nemestrina
ENSTTRG00000008045	YBX3	100	83.835	ENSMLEG00000033618	YBX3	74	82.331	Mandrillus_leucophaeus
ENSTTRG00000008045	YBX3	89	75.410	ENSMGAG00000014224	YBX3	89	67.153	Meleagris_gallopavo
ENSTTRG00000008045	YBX3	100	84.211	ENSMAUG00000012185	Ybx3	82	83.083	Mesocricetus_auratus
ENSTTRG00000008045	YBX3	100	84.962	ENSMICG00000038002	-	71	84.586	Microcebus_murinus
ENSTTRG00000008045	YBX3	79	77.119	ENSMICG00000031459	-	63	81.159	Microcebus_murinus
ENSTTRG00000008045	YBX3	100	83.459	ENSMOCG00000016291	Ybx3	86	82.331	Microtus_ochrogaster
ENSTTRG00000008045	YBX3	100	74.906	ENSMODG00000018248	YBX3	83	75.655	Monodelphis_domestica
ENSTTRG00000008045	YBX3	100	83.459	MGP_CAROLIEiJ_G0028947	Ybx3	72	82.331	Mus_caroli
ENSTTRG00000008045	YBX3	100	83.459	ENSMUSG00000030189	Ybx3	72	82.331	Mus_musculus
ENSTTRG00000008045	YBX3	100	84.211	MGP_PahariEiJ_G0022709	Ybx3	72	83.083	Mus_pahari
ENSTTRG00000008045	YBX3	100	83.835	MGP_SPRETEiJ_G0029994	Ybx3	72	82.707	Mus_spretus
ENSTTRG00000008045	YBX3	100	74.453	ENSMPUG00000011810	YBX3	71	71.739	Mustela_putorius_furo
ENSTTRG00000008045	YBX3	100	85.556	ENSMLUG00000007476	YBX3	99	84.074	Myotis_lucifugus
ENSTTRG00000008045	YBX3	100	80.827	ENSNGAG00000000710	Ybx3	80	59.470	Nannospalax_galili
ENSTTRG00000008045	YBX3	97	87.500	ENSNLEG00000034844	YBX3	74	80.075	Nomascus_leucogenys
ENSTTRG00000008045	YBX3	53	78.169	ENSMEUG00000002507	-	65	78.169	Notamacropus_eugenii
ENSTTRG00000008045	YBX3	100	76.316	ENSODEG00000017957	YBX3	77	76.316	Octodon_degus
ENSTTRG00000008045	YBX3	100	84.962	ENSOCUG00000001889	YBX3	76	84.211	Oryctolagus_cuniculus
ENSTTRG00000008045	YBX3	100	81.985	ENSOGAG00000013245	YBX3	71	81.618	Otolemur_garnettii
ENSTTRG00000008045	YBX3	100	81.818	ENSOARG00000020919	YBX3	88	80.597	Ovis_aries
ENSTTRG00000008045	YBX3	100	84.586	ENSPPAG00000039068	YBX3	73	84.586	Pan_paniscus
ENSTTRG00000008045	YBX3	100	87.218	ENSPPRG00000005859	YBX3	70	87.218	Panthera_pardus
ENSTTRG00000008045	YBX3	100	86.466	ENSPTIG00000005322	YBX3	74	85.714	Panthera_tigris_altaica
ENSTTRG00000008045	YBX3	100	84.586	ENSPTRG00000004681	YBX3	70	84.586	Pan_troglodytes
ENSTTRG00000008045	YBX3	100	83.835	ENSPANG00000010280	YBX3	71	83.835	Papio_anubis
ENSTTRG00000008045	YBX3	72	98.780	ENSPSIG00000009247	YBX3	82	100.000	Pelodiscus_sinensis
ENSTTRG00000008045	YBX3	77	92.391	ENSPEMG00000010391	-	58	80.000	Peromyscus_maniculatus_bairdii
ENSTTRG00000008045	YBX3	100	83.459	ENSPEMG00000012132	-	82	82.707	Peromyscus_maniculatus_bairdii
ENSTTRG00000008045	YBX3	98	75.191	ENSPCIG00000029949	YBX3	100	74.046	Phascolarctos_cinereus
ENSTTRG00000008045	YBX3	100	84.211	ENSPPYG00000004279	YBX3	71	84.211	Pongo_abelii
ENSTTRG00000008045	YBX3	70	83.871	ENSPCAG00000001397	YBX3	62	83.516	Procavia_capensis
ENSTTRG00000008045	YBX3	53	81.818	ENSPCOG00000011663	YBX3	59	79.592	Propithecus_coquereli
ENSTTRG00000008045	YBX3	100	84.586	ENSRNOG00000005480	Ybx3	72	83.459	Rattus_norvegicus
ENSTTRG00000008045	YBX3	100	84.586	ENSRBIG00000039208	YBX3	71	84.586	Rhinopithecus_bieti
ENSTTRG00000008045	YBX3	100	84.586	ENSRROG00000029638	YBX3	71	84.586	Rhinopithecus_roxellana
ENSTTRG00000008045	YBX3	100	84.962	ENSSBOG00000030573	YBX3	77	84.962	Saimiri_boliviensis_boliviensis
ENSTTRG00000008045	YBX3	100	75.000	ENSSHAG00000003262	YBX3	90	75.373	Sarcophilus_harrisii
ENSTTRG00000008045	YBX3	100	87.970	ENSSSCG00000000633	YBX3	69	87.970	Sus_scrofa
ENSTTRG00000008045	YBX3	100	63.433	ENSTGUG00000012047	YBX3	92	63.433	Taeniopygia_guttata
ENSTTRG00000008045	YBX3	100	86.466	ENSTBEG00000012570	YBX3	72	86.466	Tupaia_belangeri
ENSTTRG00000008045	YBX3	98	83.462	ENSUAMG00000016662	YBX3	93	83.846	Ursus_americanus
ENSTTRG00000008045	YBX3	100	84.962	ENSUMAG00000016118	YBX3	86	85.338	Ursus_maritimus
ENSTTRG00000008045	YBX3	80	100.000	ENSVPAG00000000876	YBX3	71	100.000	Vicugna_pacos
ENSTTRG00000008045	YBX3	96	84.314	ENSVVUG00000004956	YBX3	93	84.706	Vulpes_vulpes
ENSTTRG00000008045	YBX3	99	57.143	ENSXETG00000016239	ybx3	82	50.000	Xenopus_tropicalis