EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000008458 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 15592 bases
Position: chrGeneScaffold_2149:728224-743815
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000008018	zf-C3HC	PF07967.13	2.4e-35	1	1
ENSTTRP00000008018	Rsm1	PF08600.10	3.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000008458	ZC3HC1-201	1440	-	ENSTTRP00000008018	479 (aa)	-	UPI00018B8761

Gene Model

Click here to download ENSTTRG00000008458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000008458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000008458	ZC3HC1	99	91.023	ENSG00000091732	ZC3HC1	95	91.023	Homo_sapiens
ENSTTRG00000008458	ZC3HC1	99	44.153	ENSAPOG00000009078	zc3hc1	95	43.347	Acanthochromis_polyacanthus
ENSTTRG00000008458	ZC3HC1	100	90.041	ENSAMEG00000005425	ZC3HC1	95	90.041	Ailuropoda_melanoleuca
ENSTTRG00000008458	ZC3HC1	99	42.626	ENSACIG00000019513	zc3hc1	95	42.656	Amphilophus_citrinellus
ENSTTRG00000008458	ZC3HC1	99	44.758	ENSAOCG00000024310	zc3hc1	95	44.960	Amphiprion_ocellaris
ENSTTRG00000008458	ZC3HC1	99	44.758	ENSAPEG00000004907	zc3hc1	95	44.153	Amphiprion_percula
ENSTTRG00000008458	ZC3HC1	85	46.698	ENSATEG00000016898	zc3hc1	85	46.479	Anabas_testudineus
ENSTTRG00000008458	ZC3HC1	93	60.850	ENSAPLG00000003832	ZC3HC1	100	60.850	Anas_platyrhynchos
ENSTTRG00000008458	ZC3HC1	99	61.331	ENSACAG00000001638	ZC3HC1	95	61.331	Anolis_carolinensis
ENSTTRG00000008458	ZC3HC1	100	88.150	ENSANAG00000022213	ZC3HC1	99	87.805	Aotus_nancymaae
ENSTTRG00000008458	ZC3HC1	91	44.176	ENSACLG00000025033	zc3hc1	95	43.956	Astatotilapia_calliptera
ENSTTRG00000008458	ZC3HC1	99	44.306	ENSAMXG00000036792	zc3hc1	97	43.892	Astyanax_mexicanus
ENSTTRG00000008458	ZC3HC1	100	91.458	ENSBTAG00000011247	ZC3HC1	95	91.458	Bos_taurus
ENSTTRG00000008458	ZC3HC1	100	89.167	ENSCJAG00000010536	ZC3HC1	99	87.805	Callithrix_jacchus
ENSTTRG00000008458	ZC3HC1	100	91.250	ENSCAFG00000031850	-	95	91.250	Canis_familiaris
ENSTTRG00000008458	ZC3HC1	100	91.097	ENSCAFG00000001499	-	94	91.097	Canis_familiaris
ENSTTRG00000008458	ZC3HC1	100	90.833	ENSCAFG00000028735	-	95	90.833	Canis_familiaris
ENSTTRG00000008458	ZC3HC1	100	90.833	ENSCAFG00000029401	-	94	90.833	Canis_familiaris
ENSTTRG00000008458	ZC3HC1	100	90.041	ENSCAFG00020023333	-	95	90.041	Canis_lupus_dingo
ENSTTRG00000008458	ZC3HC1	100	91.042	ENSCAFG00020006829	-	95	91.042	Canis_lupus_dingo
ENSTTRG00000008458	ZC3HC1	100	84.167	ENSCHIG00000014103	ZC3HC1	95	84.167	Capra_hircus
ENSTTRG00000008458	ZC3HC1	100	86.875	ENSTSYG00000002843	ZC3HC1	95	86.875	Carlito_syrichta
ENSTTRG00000008458	ZC3HC1	95	65.284	ENSCAPG00000016300	ZC3HC1	100	64.114	Cavia_aperea
ENSTTRG00000008458	ZC3HC1	100	84.583	ENSCPOG00000014034	ZC3HC1	96	83.958	Cavia_porcellus
ENSTTRG00000008458	ZC3HC1	100	72.025	ENSCCAG00000020384	ZC3HC1	100	90.308	Cebus_capucinus
ENSTTRG00000008458	ZC3HC1	100	90.833	ENSCATG00000023130	ZC3HC1	97	90.736	Cercocebus_atys
ENSTTRG00000008458	ZC3HC1	100	62.213	ENSCLAG00000008260	ZC3HC1	94	60.334	Chinchilla_lanigera
ENSTTRG00000008458	ZC3HC1	76	91.008	ENSCSAG00000009881	ZC3HC1	97	91.008	Chlorocebus_sabaeus
ENSTTRG00000008458	ZC3HC1	94	89.800	ENSCHOG00000011846	ZC3HC1	99	89.800	Choloepus_hoffmanni
ENSTTRG00000008458	ZC3HC1	100	67.983	ENSCPBG00000017519	ZC3HC1	96	67.983	Chrysemys_picta_bellii
ENSTTRG00000008458	ZC3HC1	100	90.833	ENSCANG00000029091	ZC3HC1	99	88.293	Colobus_angolensis_palliatus
ENSTTRG00000008458	ZC3HC1	100	85.833	ENSCGRG00001018805	Zc3hc1	95	85.833	Cricetulus_griseus_chok1gshd
ENSTTRG00000008458	ZC3HC1	100	84.583	ENSCGRG00000017114	Zc3hc1	95	84.583	Cricetulus_griseus_crigri
ENSTTRG00000008458	ZC3HC1	98	43.522	ENSCSEG00000009284	zc3hc1	92	43.320	Cynoglossus_semilaevis
ENSTTRG00000008458	ZC3HC1	99	43.496	ENSCVAG00000011566	zc3hc1	95	43.496	Cyprinodon_variegatus
ENSTTRG00000008458	ZC3HC1	100	47.262	ENSDARG00000062651	zc3hc1	96	47.262	Danio_rerio
ENSTTRG00000008458	ZC3HC1	100	87.500	ENSDNOG00000045016	ZC3HC1	95	87.500	Dasypus_novemcinctus
ENSTTRG00000008458	ZC3HC1	100	78.750	ENSDORG00000008697	Zc3hc1	95	78.750	Dipodomys_ordii
ENSTTRG00000008458	ZC3HC1	94	91.611	ENSEASG00005008789	ZC3HC1	97	91.611	Equus_asinus_asinus
ENSTTRG00000008458	ZC3HC1	100	91.268	ENSECAG00000017886	ZC3HC1	95	91.268	Equus_caballus
ENSTTRG00000008458	ZC3HC1	83	83.333	ENSEEUG00000003123	ZC3HC1	79	83.333	Erinaceus_europaeus
ENSTTRG00000008458	ZC3HC1	99	44.400	ENSELUG00000023168	zc3hc1	95	44.533	Esox_lucius
ENSTTRG00000008458	ZC3HC1	100	90.417	ENSFCAG00000010429	ZC3HC1	100	86.469	Felis_catus
ENSTTRG00000008458	ZC3HC1	95	60.256	ENSFALG00000005006	ZC3HC1	100	60.256	Ficedula_albicollis
ENSTTRG00000008458	ZC3HC1	100	86.458	ENSFDAG00000019897	ZC3HC1	96	86.458	Fukomys_damarensis
ENSTTRG00000008458	ZC3HC1	99	43.002	ENSFHEG00000020149	zc3hc1	95	42.857	Fundulus_heteroclitus
ENSTTRG00000008458	ZC3HC1	98	41.615	ENSGMOG00000002914	zc3hc1	95	41.942	Gadus_morhua
ENSTTRG00000008458	ZC3HC1	99	62.162	ENSGALG00000008003	ZC3HC1	97	62.162	Gallus_gallus
ENSTTRG00000008458	ZC3HC1	99	43.992	ENSGAFG00000016095	zc3hc1	95	44.016	Gambusia_affinis
ENSTTRG00000008458	ZC3HC1	99	44.196	ENSGACG00000019706	zc3hc1	95	43.813	Gasterosteus_aculeatus
ENSTTRG00000008458	ZC3HC1	81	68.286	ENSGAGG00000016106	ZC3HC1	100	68.286	Gopherus_agassizii
ENSTTRG00000008458	ZC3HC1	99	90.814	ENSGGOG00000015504	ZC3HC1	98	88.725	Gorilla_gorilla
ENSTTRG00000008458	ZC3HC1	99	42.915	ENSHBUG00000008347	zc3hc1	95	42.713	Haplochromis_burtoni
ENSTTRG00000008458	ZC3HC1	100	87.917	ENSHGLG00000005085	ZC3HC1	96	87.917	Heterocephalus_glaber_female
ENSTTRG00000008458	ZC3HC1	100	87.708	ENSHGLG00100011395	ZC3HC1	96	87.708	Heterocephalus_glaber_male
ENSTTRG00000008458	ZC3HC1	99	42.355	ENSHCOG00000014309	zc3hc1	95	43.121	Hippocampus_comes
ENSTTRG00000008458	ZC3HC1	100	88.333	ENSSTOG00000023599	-	95	88.333	Ictidomys_tridecemlineatus
ENSTTRG00000008458	ZC3HC1	99	44.332	ENSKMAG00000015315	zc3hc1	89	43.496	Kryptolebias_marmoratus
ENSTTRG00000008458	ZC3HC1	98	44.355	ENSLBEG00000017325	zc3hc1	92	46.018	Labrus_bergylta
ENSTTRG00000008458	ZC3HC1	80	55.779	ENSLACG00000013032	ZC3HC1	94	55.779	Latimeria_chalumnae
ENSTTRG00000008458	ZC3HC1	99	52.049	ENSLOCG00000015963	zc3hc1	96	52.761	Lepisosteus_oculatus
ENSTTRG00000008458	ZC3HC1	100	87.810	ENSLAFG00000001292	ZC3HC1	95	87.810	Loxodonta_africana
ENSTTRG00000008458	ZC3HC1	100	91.042	ENSMFAG00000030176	ZC3HC1	97	90.984	Macaca_fascicularis
ENSTTRG00000008458	ZC3HC1	100	89.813	ENSMMUG00000006155	ZC3HC1	99	91.233	Macaca_mulatta
ENSTTRG00000008458	ZC3HC1	100	91.250	ENSMNEG00000011833	ZC3HC1	100	91.038	Macaca_nemestrina
ENSTTRG00000008458	ZC3HC1	100	91.042	ENSMLEG00000027328	ZC3HC1	98	91.281	Mandrillus_leucophaeus
ENSTTRG00000008458	ZC3HC1	99	44.219	ENSMAMG00000010691	zc3hc1	95	44.040	Mastacembelus_armatus
ENSTTRG00000008458	ZC3HC1	99	42.510	ENSMZEG00005007142	zc3hc1	95	42.308	Maylandia_zebra
ENSTTRG00000008458	ZC3HC1	99	61.429	ENSMGAG00000002977	ZC3HC1	97	62.041	Meleagris_gallopavo
ENSTTRG00000008458	ZC3HC1	87	78.538	ENSMAUG00000017032	Zc3hc1	93	78.538	Mesocricetus_auratus
ENSTTRG00000008458	ZC3HC1	100	89.792	ENSMICG00000009167	ZC3HC1	95	90.881	Microcebus_murinus
ENSTTRG00000008458	ZC3HC1	100	85.208	ENSMOCG00000015239	Zc3hc1	95	85.208	Microtus_ochrogaster
ENSTTRG00000008458	ZC3HC1	91	43.202	ENSMMOG00000002204	zc3hc1	99	42.982	Mola_mola
ENSTTRG00000008458	ZC3HC1	100	63.855	ENSMODG00000014630	ZC3HC1	95	63.855	Monodelphis_domestica
ENSTTRG00000008458	ZC3HC1	97	44.376	ENSMALG00000014447	zc3hc1	95	44.177	Monopterus_albus
ENSTTRG00000008458	ZC3HC1	100	85.417	MGP_CAROLIEiJ_G0028183	Zc3hc1	95	85.417	Mus_caroli
ENSTTRG00000008458	ZC3HC1	100	85.417	ENSMUSG00000039130	Zc3hc1	95	85.417	Mus_musculus
ENSTTRG00000008458	ZC3HC1	100	78.333	MGP_PahariEiJ_G0021941	Zc3hc1	95	78.333	Mus_pahari
ENSTTRG00000008458	ZC3HC1	100	85.417	MGP_SPRETEiJ_G0029183	Zc3hc1	95	85.417	Mus_spretus
ENSTTRG00000008458	ZC3HC1	95	90.153	ENSMPUG00000005297	ZC3HC1	90	90.153	Mustela_putorius_furo
ENSTTRG00000008458	ZC3HC1	100	89.855	ENSMLUG00000000063	-	95	89.855	Myotis_lucifugus
ENSTTRG00000008458	ZC3HC1	70	85.714	ENSMLUG00000029228	-	99	85.714	Myotis_lucifugus
ENSTTRG00000008458	ZC3HC1	100	85.655	ENSNGAG00000019014	Zc3hc1	95	85.655	Nannospalax_galili
ENSTTRG00000008458	ZC3HC1	99	43.205	ENSNBRG00000004577	zc3hc1	95	42.394	Neolamprologus_brichardi
ENSTTRG00000008458	ZC3HC1	99	89.958	ENSNLEG00000012698	ZC3HC1	97	90.385	Nomascus_leucogenys
ENSTTRG00000008458	ZC3HC1	100	78.125	ENSMEUG00000011023	ZC3HC1	95	78.125	Notamacropus_eugenii
ENSTTRG00000008458	ZC3HC1	63	81.356	ENSOPRG00000007867	-	62	81.356	Ochotona_princeps
ENSTTRG00000008458	ZC3HC1	100	82.917	ENSODEG00000014604	ZC3HC1	94	85.220	Octodon_degus
ENSTTRG00000008458	ZC3HC1	99	43.522	ENSONIG00000011644	zc3hc1	95	42.713	Oreochromis_niloticus
ENSTTRG00000008458	ZC3HC1	95	67.097	ENSOANG00000011460	ZC3HC1	100	67.312	Ornithorhynchus_anatinus
ENSTTRG00000008458	ZC3HC1	100	84.472	ENSOCUG00000017137	ZC3HC1	95	84.472	Oryctolagus_cuniculus
ENSTTRG00000008458	ZC3HC1	98	43.061	ENSORLG00000014409	zc3hc1	94	42.713	Oryzias_latipes
ENSTTRG00000008458	ZC3HC1	98	43.699	ENSORLG00020015874	zc3hc1	94	43.347	Oryzias_latipes_hni
ENSTTRG00000008458	ZC3HC1	98	43.496	ENSORLG00015014641	zc3hc1	94	43.145	Oryzias_latipes_hsok
ENSTTRG00000008458	ZC3HC1	98	44.720	ENSOMEG00000000215	zc3hc1	94	44.467	Oryzias_melastigma
ENSTTRG00000008458	ZC3HC1	98	44.720	ENSOMEG00000020604	zc3hc1	94	44.467	Oryzias_melastigma
ENSTTRG00000008458	ZC3HC1	100	84.167	ENSOGAG00000026193	ZC3HC1	95	84.167	Otolemur_garnettii
ENSTTRG00000008458	ZC3HC1	100	91.304	ENSOARG00000004907	ZC3HC1	94	91.304	Ovis_aries
ENSTTRG00000008458	ZC3HC1	99	91.023	ENSPPAG00000043172	ZC3HC1	98	88.725	Pan_paniscus
ENSTTRG00000008458	ZC3HC1	100	89.583	ENSPPRG00000001004	ZC3HC1	100	85.624	Panthera_pardus
ENSTTRG00000008458	ZC3HC1	100	90.208	ENSPTIG00000007823	ZC3HC1	100	86.258	Panthera_tigris_altaica
ENSTTRG00000008458	ZC3HC1	99	90.814	ENSPTRG00000019685	ZC3HC1	98	88.725	Pan_troglodytes
ENSTTRG00000008458	ZC3HC1	100	89.605	ENSPANG00000014229	ZC3HC1	99	88.293	Papio_anubis
ENSTTRG00000008458	ZC3HC1	99	48.041	ENSPKIG00000007172	zc3hc1	96	48.163	Paramormyrops_kingsleyae
ENSTTRG00000008458	ZC3HC1	98	62.893	ENSPSIG00000016646	ZC3HC1	94	62.893	Pelodiscus_sinensis
ENSTTRG00000008458	ZC3HC1	97	41.909	ENSPMGG00000003548	zc3hc1	92	41.701	Periophthalmus_magnuspinnatus
ENSTTRG00000008458	ZC3HC1	100	85.208	ENSPEMG00000000514	Zc3hc1	95	85.849	Peromyscus_maniculatus_bairdii
ENSTTRG00000008458	ZC3HC1	100	75.417	ENSPCIG00000020619	ZC3HC1	100	77.949	Phascolarctos_cinereus
ENSTTRG00000008458	ZC3HC1	99	43.585	ENSPFOG00000003466	zc3hc1	95	43.611	Poecilia_formosa
ENSTTRG00000008458	ZC3HC1	99	43.381	ENSPLAG00000022211	zc3hc1	95	43.408	Poecilia_latipinna
ENSTTRG00000008458	ZC3HC1	99	43.585	ENSPMEG00000001458	zc3hc1	95	43.611	Poecilia_mexicana
ENSTTRG00000008458	ZC3HC1	99	43.585	ENSPREG00000004004	zc3hc1	95	43.611	Poecilia_reticulata
ENSTTRG00000008458	ZC3HC1	99	82.536	ENSPPYG00000017998	ZC3HC1	95	82.536	Pongo_abelii
ENSTTRG00000008458	ZC3HC1	96	83.948	ENSPCAG00000001182	ZC3HC1	100	83.948	Procavia_capensis
ENSTTRG00000008458	ZC3HC1	100	91.042	ENSPCOG00000017354	ZC3HC1	95	91.195	Propithecus_coquereli
ENSTTRG00000008458	ZC3HC1	100	84.583	ENSPVAG00000003195	ZC3HC1	95	85.208	Pteropus_vampyrus
ENSTTRG00000008458	ZC3HC1	99	42.510	ENSPNYG00000020692	zc3hc1	95	42.308	Pundamilia_nyererei
ENSTTRG00000008458	ZC3HC1	98	45.493	ENSPNAG00000020746	zc3hc1	95	45.073	Pygocentrus_nattereri
ENSTTRG00000008458	ZC3HC1	100	84.615	ENSRNOG00000010154	Zc3hc1	95	84.615	Rattus_norvegicus
ENSTTRG00000008458	ZC3HC1	95	91.410	ENSRBIG00000029409	ZC3HC1	100	92.123	Rhinopithecus_bieti
ENSTTRG00000008458	ZC3HC1	100	90.833	ENSRROG00000041831	ZC3HC1	97	90.984	Rhinopithecus_roxellana
ENSTTRG00000008458	ZC3HC1	88	87.742	ENSSBOG00000032787	ZC3HC1	99	89.268	Saimiri_boliviensis_boliviensis
ENSTTRG00000008458	ZC3HC1	97	77.253	ENSSHAG00000002529	ZC3HC1	100	77.253	Sarcophilus_harrisii
ENSTTRG00000008458	ZC3HC1	100	48.875	ENSSFOG00015003667	zc3hc1	92	48.671	Scleropages_formosus
ENSTTRG00000008458	ZC3HC1	98	42.683	ENSSMAG00000000647	zc3hc1	85	43.293	Scophthalmus_maximus
ENSTTRG00000008458	ZC3HC1	99	44.399	ENSSDUG00000004241	zc3hc1	93	44.422	Seriola_dumerili
ENSTTRG00000008458	ZC3HC1	99	44.919	ENSSLDG00000025056	zc3hc1	93	44.939	Seriola_lalandi_dorsalis
ENSTTRG00000008458	ZC3HC1	100	78.125	ENSSARG00000012013	ZC3HC1	95	78.125	Sorex_araneus
ENSTTRG00000008458	ZC3HC1	90	56.322	ENSSPUG00000000778	ZC3HC1	86	56.322	Sphenodon_punctatus
ENSTTRG00000008458	ZC3HC1	98	45.102	ENSSPAG00000020041	zc3hc1	94	45.122	Stegastes_partitus
ENSTTRG00000008458	ZC3HC1	100	90.625	ENSSSCG00000016565	ZC3HC1	100	90.256	Sus_scrofa
ENSTTRG00000008458	ZC3HC1	51	58.130	ENSTGUG00000016262	ZC3HC1	100	58.130	Taeniopygia_guttata
ENSTTRG00000008458	ZC3HC1	99	42.394	ENSTRUG00000020077	zc3hc1	95	42.191	Takifugu_rubripes
ENSTTRG00000008458	ZC3HC1	99	43.149	ENSTNIG00000007585	zc3hc1	99	41.770	Tetraodon_nigroviridis
ENSTTRG00000008458	ZC3HC1	99	79.123	ENSTBEG00000005216	ZC3HC1	95	79.123	Tupaia_belangeri
ENSTTRG00000008458	ZC3HC1	100	90.625	ENSUAMG00000020249	ZC3HC1	95	90.625	Ursus_americanus
ENSTTRG00000008458	ZC3HC1	100	90.208	ENSUMAG00000009268	ZC3HC1	95	90.208	Ursus_maritimus
ENSTTRG00000008458	ZC3HC1	76	89.796	ENSVPAG00000010846	ZC3HC1	72	89.796	Vicugna_pacos
ENSTTRG00000008458	ZC3HC1	95	91.048	ENSVVUG00000012386	ZC3HC1	95	91.048	Vulpes_vulpes
ENSTTRG00000008458	ZC3HC1	95	51.496	ENSXETG00000033900	zc3hc1	95	50.427	Xenopus_tropicalis
ENSTTRG00000008458	ZC3HC1	99	43.381	ENSXCOG00000013570	zc3hc1	95	42.596	Xiphophorus_couchianus
ENSTTRG00000008458	ZC3HC1	91	45.475	ENSXMAG00000010979	zc3hc1	95	44.615	Xiphophorus_maculatus