EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000008572 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 61216 bases
Position: chrGeneScaffold_978:478414-539629
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000008127	zf-CCCH	PF00642.24	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000008572	RC3H1-201	3408	-	ENSTTRP00000008127	1135 (aa)	-	UPI00018B842E

Gene Model

Click here to download ENSTTRG00000008572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000008572's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000008572	RC3H1	86	62.549	ENSTTRG00000016954	RC3H2	81	61.248

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000008572	RC3H1	100	96.564	ENSG00000135870	RC3H1	100	96.564	Homo_sapiens
ENSTTRG00000008572	RC3H1	100	96.035	ENSAMEG00000015657	RC3H1	100	96.035	Ailuropoda_melanoleuca
ENSTTRG00000008572	RC3H1	100	87.641	ENSAPLG00000005341	RC3H1	100	87.108	Anas_platyrhynchos
ENSTTRG00000008572	RC3H1	100	84.756	ENSACAG00000015271	RC3H1	100	84.380	Anolis_carolinensis
ENSTTRG00000008572	RC3H1	100	96.740	ENSANAG00000036716	RC3H1	100	96.740	Aotus_nancymaae
ENSTTRG00000008572	RC3H1	100	96.300	ENSBTAG00000052708	RC3H1	100	96.300	Bos_taurus
ENSTTRG00000008572	RC3H1	100	96.564	ENSCJAG00000009106	RC3H1	100	96.564	Callithrix_jacchus
ENSTTRG00000008572	RC3H1	100	96.564	ENSCAFG00000014434	RC3H1	100	96.564	Canis_familiaris
ENSTTRG00000008572	RC3H1	100	96.479	ENSCAFG00020017112	RC3H1	99	97.978	Canis_lupus_dingo
ENSTTRG00000008572	RC3H1	100	96.476	ENSCHIG00000002873	RC3H1	100	96.476	Capra_hircus
ENSTTRG00000008572	RC3H1	99	94.626	ENSTSYG00000003913	RC3H1	99	94.626	Carlito_syrichta
ENSTTRG00000008572	RC3H1	100	90.845	ENSCPOG00000004349	RC3H1	100	90.581	Cavia_porcellus
ENSTTRG00000008572	RC3H1	100	94.361	ENSCCAG00000025652	RC3H1	98	96.371	Cebus_capucinus
ENSTTRG00000008572	RC3H1	100	96.740	ENSCATG00000033497	RC3H1	100	96.740	Cercocebus_atys
ENSTTRG00000008572	RC3H1	100	94.102	ENSCLAG00000011267	RC3H1	100	94.102	Chinchilla_lanigera
ENSTTRG00000008572	RC3H1	96	97.059	ENSCSAG00000011823	RC3H1	85	97.059	Chlorocebus_sabaeus
ENSTTRG00000008572	RC3H1	93	96.087	ENSCPBG00000014670	RC3H1	100	96.087	Chrysemys_picta_bellii
ENSTTRG00000008572	RC3H1	100	96.743	ENSCANG00000032120	RC3H1	100	96.743	Colobus_angolensis_palliatus
ENSTTRG00000008572	RC3H1	100	93.921	ENSCGRG00001020812	Rc3h1	100	93.480	Cricetulus_griseus_chok1gshd
ENSTTRG00000008572	RC3H1	100	93.921	ENSCGRG00000011952	Rc3h1	100	93.480	Cricetulus_griseus_crigri
ENSTTRG00000008572	RC3H1	55	95.338	ENSDNOG00000011494	RC3H1	99	95.338	Dasypus_novemcinctus
ENSTTRG00000008572	RC3H1	100	94.802	ENSDORG00000004855	Rc3h1	100	94.802	Dipodomys_ordii
ENSTTRG00000008572	RC3H1	81	97.006	ENSETEG00000012064	RC3H1	87	97.006	Echinops_telfairi
ENSTTRG00000008572	RC3H1	100	95.330	ENSEASG00005017000	RC3H1	100	95.330	Equus_asinus_asinus
ENSTTRG00000008572	RC3H1	100	95.330	ENSECAG00000021208	RC3H1	100	96.859	Equus_caballus
ENSTTRG00000008572	RC3H1	83	97.059	ENSEEUG00000014861	RC3H1	93	83.117	Erinaceus_europaeus
ENSTTRG00000008572	RC3H1	100	97.004	ENSFCAG00000014924	RC3H1	100	97.004	Felis_catus
ENSTTRG00000008572	RC3H1	100	86.661	ENSFALG00000002947	RC3H1	100	85.515	Ficedula_albicollis
ENSTTRG00000008572	RC3H1	100	94.718	ENSFDAG00000013303	RC3H1	100	94.718	Fukomys_damarensis
ENSTTRG00000008572	RC3H1	100	86.964	ENSGALG00000004587	RC3H1	100	86.427	Gallus_gallus
ENSTTRG00000008572	RC3H1	100	87.303	ENSGAGG00000018194	RC3H1	100	87.215	Gopherus_agassizii
ENSTTRG00000008572	RC3H1	100	89.816	ENSGGOG00000005735	RC3H1	100	89.816	Gorilla_gorilla
ENSTTRG00000008572	RC3H1	88	89.310	ENSHGLG00000004183	-	99	89.266	Heterocephalus_glaber_female
ENSTTRG00000008572	RC3H1	100	94.366	ENSHGLG00100008577	RC3H1	100	94.366	Heterocephalus_glaber_male
ENSTTRG00000008572	RC3H1	100	95.070	ENSSTOG00000016033	RC3H1	100	95.070	Ictidomys_tridecemlineatus
ENSTTRG00000008572	RC3H1	100	94.273	ENSJJAG00000018915	Rc3h1	100	94.009	Jaculus_jaculus
ENSTTRG00000008572	RC3H1	100	74.392	ENSLACG00000016186	RC3H1	100	77.230	Latimeria_chalumnae
ENSTTRG00000008572	RC3H1	97	96.451	ENSLAFG00000004367	RC3H1	99	96.451	Loxodonta_africana
ENSTTRG00000008572	RC3H1	100	96.652	ENSMFAG00000033725	RC3H1	100	96.652	Macaca_fascicularis
ENSTTRG00000008572	RC3H1	100	96.740	ENSMMUG00000000630	RC3H1	100	96.740	Macaca_mulatta
ENSTTRG00000008572	RC3H1	100	96.740	ENSMNEG00000035968	RC3H1	100	96.740	Macaca_nemestrina
ENSTTRG00000008572	RC3H1	100	96.652	ENSMLEG00000037455	RC3H1	100	96.652	Mandrillus_leucophaeus
ENSTTRG00000008572	RC3H1	97	95.243	ENSMAUG00000020864	Rc3h1	100	94.456	Mesocricetus_auratus
ENSTTRG00000008572	RC3H1	100	96.476	ENSMICG00000003000	RC3H1	100	96.476	Microcebus_murinus
ENSTTRG00000008572	RC3H1	93	92.533	ENSMOCG00000016587	Rc3h1	98	92.155	Microtus_ochrogaster
ENSTTRG00000008572	RC3H1	100	91.630	ENSMODG00000004289	RC3H1	100	91.718	Monodelphis_domestica
ENSTTRG00000008572	RC3H1	100	92.952	MGP_CAROLIEiJ_G0014756	Rc3h1	100	92.070	Mus_caroli
ENSTTRG00000008572	RC3H1	100	92.775	ENSMUSG00000040423	Rc3h1	100	92.335	Mus_musculus
ENSTTRG00000008572	RC3H1	100	92.599	MGP_PahariEiJ_G0027992	Rc3h1	100	92.159	Mus_pahari
ENSTTRG00000008572	RC3H1	100	92.687	MGP_SPRETEiJ_G0015563	Rc3h1	100	92.247	Mus_spretus
ENSTTRG00000008572	RC3H1	100	96.127	ENSMPUG00000004747	RC3H1	100	96.127	Mustela_putorius_furo
ENSTTRG00000008572	RC3H1	100	94.537	ENSMLUG00000011127	RC3H1	100	94.537	Myotis_lucifugus
ENSTTRG00000008572	RC3H1	100	95.242	ENSNGAG00000011135	Rc3h1	100	94.802	Nannospalax_galili
ENSTTRG00000008572	RC3H1	100	96.476	ENSNLEG00000015327	RC3H1	100	96.476	Nomascus_leucogenys
ENSTTRG00000008572	RC3H1	99	82.524	ENSOPRG00000013068	RC3H1	99	82.524	Ochotona_princeps
ENSTTRG00000008572	RC3H1	100	94.190	ENSODEG00000014185	RC3H1	100	94.190	Octodon_degus
ENSTTRG00000008572	RC3H1	100	91.004	ENSOANG00000000924	RC3H1	100	91.004	Ornithorhynchus_anatinus
ENSTTRG00000008572	RC3H1	99	95.353	ENSOCUG00000004930	RC3H1	98	95.353	Oryctolagus_cuniculus
ENSTTRG00000008572	RC3H1	100	89.270	ENSOGAG00000004044	RC3H1	100	89.270	Otolemur_garnettii
ENSTTRG00000008572	RC3H1	100	96.497	ENSOARG00000013011	RC3H1	100	96.497	Ovis_aries
ENSTTRG00000008572	RC3H1	100	96.567	ENSPPAG00000039253	RC3H1	100	96.567	Pan_paniscus
ENSTTRG00000008572	RC3H1	100	96.740	ENSPPRG00000009007	RC3H1	100	96.740	Panthera_pardus
ENSTTRG00000008572	RC3H1	100	96.842	ENSPTIG00000015326	RC3H1	100	96.842	Panthera_tigris_altaica
ENSTTRG00000008572	RC3H1	100	96.567	ENSPTRG00000001702	RC3H1	100	96.567	Pan_troglodytes
ENSTTRG00000008572	RC3H1	100	96.652	ENSPANG00000008886	RC3H1	100	96.652	Papio_anubis
ENSTTRG00000008572	RC3H1	100	88.626	ENSPSIG00000016181	RC3H1	100	88.801	Pelodiscus_sinensis
ENSTTRG00000008572	RC3H1	100	93.216	ENSPEMG00000011966	Rc3h1	100	92.687	Peromyscus_maniculatus_bairdii
ENSTTRG00000008572	RC3H1	70	94.051	ENSPCIG00000002058	RC3H1	95	98.206	Phascolarctos_cinereus
ENSTTRG00000008572	RC3H1	100	93.216	ENSPPYG00000000490	RC3H1	98	96.180	Pongo_abelii
ENSTTRG00000008572	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSTTRG00000008572	RC3H1	83	95.949	ENSPCOG00000021795	RC3H1	96	95.949	Propithecus_coquereli
ENSTTRG00000008572	RC3H1	100	87.489	ENSPVAG00000007593	RC3H1	100	87.489	Pteropus_vampyrus
ENSTTRG00000008572	RC3H1	97	60.843	ENSPNAG00000023439	rc3h1a	95	90.766	Pygocentrus_nattereri
ENSTTRG00000008572	RC3H1	100	96.655	ENSRBIG00000037743	RC3H1	100	96.655	Rhinopithecus_bieti
ENSTTRG00000008572	RC3H1	100	96.564	ENSRROG00000036546	RC3H1	100	96.564	Rhinopithecus_roxellana
ENSTTRG00000008572	RC3H1	93	88.396	ENSSBOG00000010664	RC3H1	100	96.923	Saimiri_boliviensis_boliviensis
ENSTTRG00000008572	RC3H1	100	90.581	ENSSHAG00000007589	RC3H1	100	90.669	Sarcophilus_harrisii
ENSTTRG00000008572	RC3H1	87	86.486	ENSSARG00000004660	RC3H1	86	86.486	Sorex_araneus
ENSTTRG00000008572	RC3H1	100	83.479	ENSSPUG00000018472	RC3H1	100	82.852	Sphenodon_punctatus
ENSTTRG00000008572	RC3H1	100	96.828	ENSSSCG00000015498	RC3H1	100	96.828	Sus_scrofa
ENSTTRG00000008572	RC3H1	100	87.303	ENSTGUG00000004090	RC3H1	100	86.591	Taeniopygia_guttata
ENSTTRG00000008572	RC3H1	93	91.019	ENSTBEG00000005015	RC3H1	93	91.019	Tupaia_belangeri
ENSTTRG00000008572	RC3H1	100	95.507	ENSUAMG00000019525	RC3H1	100	95.507	Ursus_americanus
ENSTTRG00000008572	RC3H1	100	96.039	ENSUMAG00000020087	RC3H1	100	96.039	Ursus_maritimus
ENSTTRG00000008572	RC3H1	91	98.423	ENSVPAG00000002591	RC3H1	92	98.423	Vicugna_pacos
ENSTTRG00000008572	RC3H1	100	96.313	ENSVVUG00000014201	RC3H1	100	96.313	Vulpes_vulpes
ENSTTRG00000008572	RC3H1	100	78.454	ENSXETG00000020030	rc3h1	100	77.913	Xenopus_tropicalis