EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000008597 (Gene tree)
Gene ID: -
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 77793 bases
Position: chrGeneScaffold_912:201191-278983
Accession: 17264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000008152	RNA_pol_Rpb1_5	PF04998.17	9.1e-104	1	1
ENSTTRP00000008152	RNA_pol_Rpb1_4	PF05000.17	8.2e-08	1	1
ENSTTRP00000008152	RNA_pol_Rpb1_2	PF00623.20	1.5e-70	1	1
ENSTTRP00000008152	RNA_pol_Rpb1_3	PF04983.18	3.2e-36	1	1
ENSTTRP00000008152	RNA_pol_Rpb1_1	PF04997.12	6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000008598	POLR1A-201	5151	-	ENSTTRP00000008152	1716 (aa)	-	UPI00018B747A

Gene Model

Click here to download ENSTTRG00000008597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000008597's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000008597	POLR1A	76	54.930	ENSTTRG00000014273	-	50	54.930
ENSTTRG00000008597	POLR1A	51	56.140	ENSTTRG00000007817	POLR3A	57	56.140

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000008597	POLR1A	97	94.359	ENSG00000068654	POLR1A	97	94.359	Homo_sapiens
ENSTTRG00000008597	POLR1A	67	66.811	ENSAPOG00000017945	polr1a	97	66.898	Acanthochromis_polyacanthus
ENSTTRG00000008597	POLR1A	100	88.695	ENSAMEG00000005807	POLR1A	100	90.164	Ailuropoda_melanoleuca
ENSTTRG00000008597	POLR1A	100	61.386	ENSACIG00000022147	polr1a	100	61.153	Amphilophus_citrinellus
ENSTTRG00000008597	POLR1A	100	63.937	ENSAOCG00000017336	polr1a	100	64.842	Amphiprion_ocellaris
ENSTTRG00000008597	POLR1A	94	73.050	ENSAPEG00000016105	polr1a	98	73.050	Amphiprion_percula
ENSTTRG00000008597	POLR1A	100	64.232	ENSATEG00000016773	polr1a	100	63.331	Anabas_testudineus
ENSTTRG00000008597	POLR1A	86	69.633	ENSAPLG00000013871	POLR1A	99	69.633	Anas_platyrhynchos
ENSTTRG00000008597	POLR1A	99	66.358	ENSACAG00000012141	POLR1A	99	66.010	Anolis_carolinensis
ENSTTRG00000008597	POLR1A	100	85.058	ENSANAG00000033927	POLR1A	100	85.233	Aotus_nancymaae
ENSTTRG00000008597	POLR1A	100	60.395	ENSACLG00000020541	polr1a	100	60.221	Astatotilapia_calliptera
ENSTTRG00000008597	POLR1A	100	88.759	ENSBTAG00000006481	POLR1A	100	88.663	Bos_taurus
ENSTTRG00000008597	POLR1A	99	36.977	WBGene00012999	rpoa-1	98	36.282	Caenorhabditis_elegans
ENSTTRG00000008597	POLR1A	100	84.660	ENSCJAG00000019547	POLR1A	100	84.893	Callithrix_jacchus
ENSTTRG00000008597	POLR1A	100	88.009	ENSCAFG00000007613	POLR1A	100	87.602	Canis_familiaris
ENSTTRG00000008597	POLR1A	100	87.870	ENSCAFG00020014752	POLR1A	100	87.464	Canis_lupus_dingo
ENSTTRG00000008597	POLR1A	100	87.863	ENSCHIG00000018204	POLR1A	100	87.631	Capra_hircus
ENSTTRG00000008597	POLR1A	100	84.459	ENSTSYG00000002761	POLR1A	100	84.692	Carlito_syrichta
ENSTTRG00000008597	POLR1A	97	80.144	ENSCAPG00000010132	POLR1A	100	80.323	Cavia_aperea
ENSTTRG00000008597	POLR1A	100	84.884	ENSCPOG00000012350	POLR1A	100	85.058	Cavia_porcellus
ENSTTRG00000008597	POLR1A	100	85.474	ENSCCAG00000019839	POLR1A	100	85.357	Cebus_capucinus
ENSTTRG00000008597	POLR1A	100	86.221	ENSCATG00000029786	POLR1A	100	86.628	Cercocebus_atys
ENSTTRG00000008597	POLR1A	100	84.406	ENSCLAG00000005187	POLR1A	100	84.000	Chinchilla_lanigera
ENSTTRG00000008597	POLR1A	100	86.237	ENSCSAG00000016251	POLR1A	100	86.643	Chlorocebus_sabaeus
ENSTTRG00000008597	POLR1A	99	71.695	ENSCPBG00000001115	POLR1A	99	71.345	Chrysemys_picta_bellii
ENSTTRG00000008597	POLR1A	99	44.957	ENSCSAVG00000007184	-	99	44.734	Ciona_savignyi
ENSTTRG00000008597	POLR1A	100	83.266	ENSCANG00000031785	POLR1A	100	83.207	Colobus_angolensis_palliatus
ENSTTRG00000008597	POLR1A	96	89.030	ENSCGRG00001006651	Polr1a	100	79.502	Cricetulus_griseus_chok1gshd
ENSTTRG00000008597	POLR1A	60	80.058	ENSCGRG00000010834	Polr1a	100	80.851	Cricetulus_griseus_crigri
ENSTTRG00000008597	POLR1A	100	59.480	ENSCSEG00000020190	polr1a	100	59.384	Cynoglossus_semilaevis
ENSTTRG00000008597	POLR1A	100	61.006	ENSCVAG00000020941	polr1a	100	61.166	Cyprinodon_variegatus
ENSTTRG00000008597	POLR1A	100	64.352	ENSDARG00000098375	polr1a	100	64.352	Danio_rerio
ENSTTRG00000008597	POLR1A	100	79.396	ENSDNOG00000010829	POLR1A	100	79.048	Dasypus_novemcinctus
ENSTTRG00000008597	POLR1A	100	83.951	ENSDORG00000008298	Polr1a	100	83.652	Dipodomys_ordii
ENSTTRG00000008597	POLR1A	93	49.091	FBgn0019938	RpI1	99	41.351	Drosophila_melanogaster
ENSTTRG00000008597	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSTTRG00000008597	POLR1A	80	66.667	ENSEBUG00000005667	-	88	66.667	Eptatretus_burgeri
ENSTTRG00000008597	POLR1A	100	88.779	ENSEASG00005001625	POLR1A	100	89.186	Equus_asinus_asinus
ENSTTRG00000008597	POLR1A	95	94.761	ENSECAG00000036306	-	98	94.761	Equus_caballus
ENSTTRG00000008597	POLR1A	100	88.837	ENSECAG00000010092	POLR1A	100	91.788	Equus_caballus
ENSTTRG00000008597	POLR1A	100	88.837	ENSECAG00000030510	-	100	91.788	Equus_caballus
ENSTTRG00000008597	POLR1A	85	96.809	ENSEEUG00000000676	POLR1A	85	97.778	Erinaceus_europaeus
ENSTTRG00000008597	POLR1A	100	65.099	ENSELUG00000012769	polr1a	99	64.430	Esox_lucius
ENSTTRG00000008597	POLR1A	100	88.184	ENSFCAG00000008966	POLR1A	100	88.650	Felis_catus
ENSTTRG00000008597	POLR1A	99	68.824	ENSFALG00000010082	POLR1A	99	68.824	Ficedula_albicollis
ENSTTRG00000008597	POLR1A	100	84.486	ENSFDAG00000013726	POLR1A	100	84.204	Fukomys_damarensis
ENSTTRG00000008597	POLR1A	100	59.582	ENSFHEG00000005996	polr1a	100	59.815	Fundulus_heteroclitus
ENSTTRG00000008597	POLR1A	100	57.576	ENSGMOG00000002230	polr1a	100	57.317	Gadus_morhua
ENSTTRG00000008597	POLR1A	90	67.207	ENSGALG00000038160	-	99	67.359	Gallus_gallus
ENSTTRG00000008597	POLR1A	100	62.173	ENSGAFG00000015266	polr1a	100	62.073	Gambusia_affinis
ENSTTRG00000008597	POLR1A	100	62.428	ENSGACG00000018791	polr1a	100	62.428	Gasterosteus_aculeatus
ENSTTRG00000008597	POLR1A	90	72.403	ENSGAGG00000004984	-	95	78.372	Gopherus_agassizii
ENSTTRG00000008597	POLR1A	100	86.287	ENSGGOG00000001788	POLR1A	100	86.694	Gorilla_gorilla
ENSTTRG00000008597	POLR1A	90	61.433	ENSHBUG00000020021	polr1a	96	69.198	Haplochromis_burtoni
ENSTTRG00000008597	POLR1A	100	84.826	ENSHGLG00000006334	POLR1A	100	84.767	Heterocephalus_glaber_female
ENSTTRG00000008597	POLR1A	100	84.580	ENSHGLG00100006614	POLR1A	100	84.522	Heterocephalus_glaber_male
ENSTTRG00000008597	POLR1A	100	60.012	ENSHCOG00000003345	polr1a	100	60.335	Hippocampus_comes
ENSTTRG00000008597	POLR1A	100	64.095	ENSIPUG00000013174	polr1a	100	64.100	Ictalurus_punctatus
ENSTTRG00000008597	POLR1A	100	83.178	ENSSTOG00000012580	POLR1A	100	83.421	Ictidomys_tridecemlineatus
ENSTTRG00000008597	POLR1A	100	83.227	ENSJJAG00000013113	Polr1a	100	83.575	Jaculus_jaculus
ENSTTRG00000008597	POLR1A	100	63.816	ENSKMAG00000007399	polr1a	100	63.409	Kryptolebias_marmoratus
ENSTTRG00000008597	POLR1A	95	65.965	ENSLBEG00000015401	polr1a	99	66.035	Labrus_bergylta
ENSTTRG00000008597	POLR1A	51	75.819	ENSLACG00000003218	polr1a	96	75.819	Latimeria_chalumnae
ENSTTRG00000008597	POLR1A	100	68.035	ENSLOCG00000010881	polr1a	100	67.998	Lepisosteus_oculatus
ENSTTRG00000008597	POLR1A	100	85.847	ENSLAFG00000014948	POLR1A	100	85.490	Loxodonta_africana
ENSTTRG00000008597	POLR1A	100	86.221	ENSMFAG00000046097	POLR1A	100	86.628	Macaca_fascicularis
ENSTTRG00000008597	POLR1A	100	86.105	ENSMMUG00000015815	POLR1A	100	86.512	Macaca_mulatta
ENSTTRG00000008597	POLR1A	100	86.221	ENSMNEG00000043313	POLR1A	100	86.628	Macaca_nemestrina
ENSTTRG00000008597	POLR1A	100	85.640	ENSMLEG00000042428	POLR1A	100	86.047	Mandrillus_leucophaeus
ENSTTRG00000008597	POLR1A	100	64.286	ENSMAMG00000016565	polr1a	100	63.937	Mastacembelus_armatus
ENSTTRG00000008597	POLR1A	100	63.647	ENSMZEG00005004915	polr1a	100	63.589	Maylandia_zebra
ENSTTRG00000008597	POLR1A	99	66.628	ENSMGAG00000013111	POLR1A	99	66.628	Meleagris_gallopavo
ENSTTRG00000008597	POLR1A	92	83.112	ENSMAUG00000008497	Polr1a	100	83.565	Mesocricetus_auratus
ENSTTRG00000008597	POLR1A	100	86.113	ENSMICG00000000757	POLR1A	100	85.997	Microcebus_murinus
ENSTTRG00000008597	POLR1A	100	83.469	ENSMOCG00000000122	Polr1a	100	83.826	Microtus_ochrogaster
ENSTTRG00000008597	POLR1A	100	62.369	ENSMMOG00000010216	polr1a	100	62.595	Mola_mola
ENSTTRG00000008597	POLR1A	100	71.404	ENSMODG00000009335	POLR1A	100	71.116	Monodelphis_domestica
ENSTTRG00000008597	POLR1A	100	63.283	ENSMALG00000013363	polr1a	100	63.246	Monopterus_albus
ENSTTRG00000008597	POLR1A	100	82.472	MGP_CAROLIEiJ_G0028494	Polr1a	100	82.472	Mus_caroli
ENSTTRG00000008597	POLR1A	100	82.472	ENSMUSG00000049553	Polr1a	100	82.472	Mus_musculus
ENSTTRG00000008597	POLR1A	100	83.227	MGP_PahariEiJ_G0022230	Polr1a	100	83.227	Mus_pahari
ENSTTRG00000008597	POLR1A	100	81.246	MGP_SPRETEiJ_G0029499	Polr1a	100	81.361	Mus_spretus
ENSTTRG00000008597	POLR1A	100	87.776	ENSMPUG00000009135	POLR1A	100	87.951	Mustela_putorius_furo
ENSTTRG00000008597	POLR1A	100	86.103	ENSMLUG00000015723	POLR1A	100	85.756	Myotis_lucifugus
ENSTTRG00000008597	POLR1A	100	83.430	ENSNGAG00000017907	Polr1a	100	84.125	Nannospalax_galili
ENSTTRG00000008597	POLR1A	100	63.763	ENSNBRG00000000519	polr1a	100	63.689	Neolamprologus_brichardi
ENSTTRG00000008597	POLR1A	100	84.442	ENSNLEG00000002264	POLR1A	100	84.673	Nomascus_leucogenys
ENSTTRG00000008597	POLR1A	73	92.913	ENSMEUG00000011665	-	74	92.913	Notamacropus_eugenii
ENSTTRG00000008597	POLR1A	99	78.929	ENSOPRG00000008269	POLR1A	100	78.926	Ochotona_princeps
ENSTTRG00000008597	POLR1A	100	84.370	ENSODEG00000003542	POLR1A	100	84.253	Octodon_degus
ENSTTRG00000008597	POLR1A	100	64.058	ENSONIG00000015895	polr1a	100	64.132	Oreochromis_niloticus
ENSTTRG00000008597	POLR1A	100	85.706	ENSOCUG00000010138	POLR1A	100	85.174	Oryctolagus_cuniculus
ENSTTRG00000008597	POLR1A	100	63.357	ENSORLG00000008753	polr1a	99	63.167	Oryzias_latipes
ENSTTRG00000008597	POLR1A	100	62.137	ENSORLG00020020726	polr1a	99	61.949	Oryzias_latipes_hni
ENSTTRG00000008597	POLR1A	96	73.404	ENSORLG00015016071	polr1a	99	74.444	Oryzias_latipes_hsok
ENSTTRG00000008597	POLR1A	100	85.581	ENSOGAG00000004031	POLR1A	100	85.407	Otolemur_garnettii
ENSTTRG00000008597	POLR1A	100	88.792	ENSOARG00000020601	POLR1A	100	88.406	Ovis_aries
ENSTTRG00000008597	POLR1A	100	86.345	ENSPPAG00000042450	POLR1A	100	86.578	Pan_paniscus
ENSTTRG00000008597	POLR1A	100	88.417	ENSPPRG00000006702	POLR1A	100	88.882	Panthera_pardus
ENSTTRG00000008597	POLR1A	100	87.877	ENSPTIG00000018783	POLR1A	100	88.341	Panthera_tigris_altaica
ENSTTRG00000008597	POLR1A	100	86.519	ENSPTRG00000012147	POLR1A	100	86.636	Pan_troglodytes
ENSTTRG00000008597	POLR1A	100	86.047	ENSPANG00000025908	POLR1A	100	86.453	Papio_anubis
ENSTTRG00000008597	POLR1A	94	75.540	ENSPKIG00000005468	polr1a	98	75.540	Paramormyrops_kingsleyae
ENSTTRG00000008597	POLR1A	63	67.251	ENSPSIG00000009321	-	99	66.974	Pelodiscus_sinensis
ENSTTRG00000008597	POLR1A	54	65.455	ENSPMGG00000009718	polr1a	95	65.455	Periophthalmus_magnuspinnatus
ENSTTRG00000008597	POLR1A	100	84.165	ENSPEMG00000022224	Polr1a	100	84.629	Peromyscus_maniculatus_bairdii
ENSTTRG00000008597	POLR1A	95	74.726	ENSPCIG00000004222	POLR1A	99	74.726	Phascolarctos_cinereus
ENSTTRG00000008597	POLR1A	100	62.275	ENSPFOG00000005025	polr1a	100	62.391	Poecilia_formosa
ENSTTRG00000008597	POLR1A	100	62.638	ENSPLAG00000021389	polr1a	100	61.957	Poecilia_latipinna
ENSTTRG00000008597	POLR1A	100	60.615	ENSPMEG00000006463	polr1a	100	60.289	Poecilia_mexicana
ENSTTRG00000008597	POLR1A	100	62.544	ENSPREG00000002389	polr1a	100	62.457	Poecilia_reticulata
ENSTTRG00000008597	POLR1A	100	85.532	ENSPPYG00000012217	POLR1A	100	85.938	Pongo_abelii
ENSTTRG00000008597	POLR1A	92	100.000	ENSPCAG00000011582	POLR1A	92	100.000	Procavia_capensis
ENSTTRG00000008597	POLR1A	100	86.055	ENSPCOG00000026987	POLR1A	100	85.997	Propithecus_coquereli
ENSTTRG00000008597	POLR1A	95	91.912	ENSPVAG00000012674	POLR1A	95	91.166	Pteropus_vampyrus
ENSTTRG00000008597	POLR1A	100	63.647	ENSPNYG00000000026	polr1a	100	63.589	Pundamilia_nyererei
ENSTTRG00000008597	POLR1A	100	64.286	ENSPNAG00000019223	polr1a	100	64.617	Pygocentrus_nattereri
ENSTTRG00000008597	POLR1A	100	83.575	ENSRNOG00000009545	Polr1a	100	83.865	Rattus_norvegicus
ENSTTRG00000008597	POLR1A	100	85.366	ENSRBIG00000028335	POLR1A	100	85.772	Rhinopithecus_bieti
ENSTTRG00000008597	POLR1A	100	85.308	ENSRROG00000031473	POLR1A	100	85.714	Rhinopithecus_roxellana
ENSTTRG00000008597	POLR1A	93	38.806	YOR341W	RPA190	96	38.806	Saccharomyces_cerevisiae
ENSTTRG00000008597	POLR1A	100	84.660	ENSSBOG00000030262	POLR1A	100	84.611	Saimiri_boliviensis_boliviensis
ENSTTRG00000008597	POLR1A	100	71.214	ENSSHAG00000014739	POLR1A	100	71.214	Sarcophilus_harrisii
ENSTTRG00000008597	POLR1A	100	65.215	ENSSFOG00015019716	polr1a	100	65.351	Scleropages_formosus
ENSTTRG00000008597	POLR1A	100	64.248	ENSSMAG00000014342	polr1a	100	64.120	Scophthalmus_maximus
ENSTTRG00000008597	POLR1A	100	64.812	ENSSDUG00000014631	polr1a	100	64.754	Seriola_dumerili
ENSTTRG00000008597	POLR1A	100	62.899	ENSSLDG00000024095	polr1a	100	62.421	Seriola_lalandi_dorsalis
ENSTTRG00000008597	POLR1A	71	96.809	ENSSARG00000003136	-	71	96.809	Sorex_araneus
ENSTTRG00000008597	POLR1A	94	78.974	ENSSPUG00000004215	POLR1A	98	78.974	Sphenodon_punctatus
ENSTTRG00000008597	POLR1A	63	71.378	ENSSPAG00000016341	polr1a	91	71.378	Stegastes_partitus
ENSTTRG00000008597	POLR1A	83	88.858	ENSSSCG00000008226	POLR1A	99	88.826	Sus_scrofa
ENSTTRG00000008597	POLR1A	99	67.630	ENSTGUG00000010704	POLR1A	100	67.571	Taeniopygia_guttata
ENSTTRG00000008597	POLR1A	100	61.162	ENSTRUG00000002210	polr1a	99	61.869	Takifugu_rubripes
ENSTTRG00000008597	POLR1A	100	57.949	ENSTNIG00000010116	polr1a	100	57.725	Tetraodon_nigroviridis
ENSTTRG00000008597	POLR1A	72	95.133	ENSTBEG00000008646	POLR1A	72	95.133	Tupaia_belangeri
ENSTTRG00000008597	POLR1A	69	86.029	ENSUAMG00000012158	-	94	86.198	Ursus_americanus
ENSTTRG00000008597	POLR1A	100	87.369	ENSUMAG00000006700	POLR1A	100	87.485	Ursus_maritimus
ENSTTRG00000008597	POLR1A	100	87.776	ENSVVUG00000001245	POLR1A	100	87.369	Vulpes_vulpes
ENSTTRG00000008597	POLR1A	100	65.263	ENSXETG00000001952	polr1a	100	66.038	Xenopus_tropicalis
ENSTTRG00000008597	POLR1A	100	62.507	ENSXMAG00000004032	polr1a	100	62.001	Xiphophorus_maculatus