EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000008707 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 65657 bases
Position: chrGeneScaffold_3077:250720-316376
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000008263	SpoU_methylase	PF00588.19	9.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000008715	TARBP1-201	4626	-	ENSTTRP00000008263	1542 (aa)	-	UPI00018B72B2

Gene Model

Click here to download ENSTTRG00000008707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000008707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000008707	TARBP1	96	83.295	ENSG00000059588	TARBP1	91	83.295	Homo_sapiens
ENSTTRG00000008707	TARBP1	85	41.028	ENSAPOG00000016419	si:dkey-85a20.4	79	40.889	Acanthochromis_polyacanthus
ENSTTRG00000008707	TARBP1	83	83.953	ENSAMEG00000003359	TARBP1	94	84.006	Ailuropoda_melanoleuca
ENSTTRG00000008707	TARBP1	85	40.936	ENSATEG00000020266	si:dkey-85a20.4	80	40.936	Anabas_testudineus
ENSTTRG00000008707	TARBP1	83	63.032	ENSAPLG00000007666	TARBP1	94	63.893	Anas_platyrhynchos
ENSTTRG00000008707	TARBP1	95	59.101	ENSACAG00000001142	TARBP1	82	59.153	Anolis_carolinensis
ENSTTRG00000008707	TARBP1	86	85.702	ENSANAG00000022031	TARBP1	85	85.702	Aotus_nancymaae
ENSTTRG00000008707	TARBP1	96	86.982	ENSBTAG00000004517	TARBP1	91	90.805	Bos_taurus
ENSTTRG00000008707	TARBP1	96	82.304	ENSCJAG00000018155	TARBP1	91	82.304	Callithrix_jacchus
ENSTTRG00000008707	TARBP1	85	84.668	ENSCAFG00000011533	TARBP1	93	84.668	Canis_familiaris
ENSTTRG00000008707	TARBP1	96	84.821	ENSCAFG00020027141	TARBP1	91	84.821	Canis_lupus_dingo
ENSTTRG00000008707	TARBP1	96	87.574	ENSCHIG00000011437	TARBP1	91	91.379	Capra_hircus
ENSTTRG00000008707	TARBP1	80	82.143	ENSTSYG00000010382	TARBP1	91	81.899	Carlito_syrichta
ENSTTRG00000008707	TARBP1	77	64.942	ENSCAPG00000010831	TARBP1	93	65.025	Cavia_aperea
ENSTTRG00000008707	TARBP1	96	74.771	ENSCPOG00000013995	TARBP1	92	74.771	Cavia_porcellus
ENSTTRG00000008707	TARBP1	95	82.838	ENSCCAG00000037278	TARBP1	91	82.838	Cebus_capucinus
ENSTTRG00000008707	TARBP1	95	83.143	ENSCATG00000011754	TARBP1	91	83.143	Cercocebus_atys
ENSTTRG00000008707	TARBP1	82	75.102	ENSCLAG00000003655	TARBP1	94	75.264	Chinchilla_lanigera
ENSTTRG00000008707	TARBP1	78	82.187	ENSCSAG00000010100	TARBP1	94	82.187	Chlorocebus_sabaeus
ENSTTRG00000008707	TARBP1	92	67.626	ENSCPBG00000005587	TARBP1	89	70.160	Chrysemys_picta_bellii
ENSTTRG00000008707	TARBP1	83	83.073	ENSCANG00000034343	TARBP1	94	83.073	Colobus_angolensis_palliatus
ENSTTRG00000008707	TARBP1	96	72.180	ENSCGRG00001016690	Tarbp1	92	71.951	Cricetulus_griseus_chok1gshd
ENSTTRG00000008707	TARBP1	85	72.256	ENSCGRG00000016893	Tarbp1	89	72.104	Cricetulus_griseus_crigri
ENSTTRG00000008707	TARBP1	78	41.379	ENSCSEG00000005255	si:dkey-85a20.4	74	42.727	Cynoglossus_semilaevis
ENSTTRG00000008707	TARBP1	80	44.954	ENSDARG00000079055	si:dkey-85a20.4	86	50.099	Danio_rerio
ENSTTRG00000008707	TARBP1	95	82.992	ENSDNOG00000008637	TARBP1	91	83.447	Dasypus_novemcinctus
ENSTTRG00000008707	TARBP1	79	69.519	ENSDORG00000007984	Tarbp1	95	69.682	Dipodomys_ordii
ENSTTRG00000008707	TARBP1	95	86.443	ENSEASG00005000252	TARBP1	92	86.443	Equus_asinus_asinus
ENSTTRG00000008707	TARBP1	95	86.291	ENSECAG00000023673	TARBP1	90	89.290	Equus_caballus
ENSTTRG00000008707	TARBP1	85	40.727	ENSELUG00000012193	si:dkey-85a20.4	82	40.504	Esox_lucius
ENSTTRG00000008707	TARBP1	91	87.407	ENSFCAG00000014183	TARBP1	87	87.407	Felis_catus
ENSTTRG00000008707	TARBP1	80	63.592	ENSFALG00000013565	TARBP1	94	63.430	Ficedula_albicollis
ENSTTRG00000008707	TARBP1	78	72.033	ENSFDAG00000001308	TARBP1	94	72.033	Fukomys_damarensis
ENSTTRG00000008707	TARBP1	82	44.728	ENSFHEG00000007565	si:dkey-85a20.4	79	44.728	Fundulus_heteroclitus
ENSTTRG00000008707	TARBP1	83	39.422	ENSGMOG00000004549	si:dkey-85a20.4	93	39.422	Gadus_morhua
ENSTTRG00000008707	TARBP1	87	62.717	ENSGALG00000011000	TARBP1	89	62.609	Gallus_gallus
ENSTTRG00000008707	TARBP1	85	40.926	ENSGAFG00000007387	si:dkey-85a20.4	79	40.520	Gambusia_affinis
ENSTTRG00000008707	TARBP1	81	42.771	ENSGACG00000005865	si:dkey-85a20.4	90	42.298	Gasterosteus_aculeatus
ENSTTRG00000008707	TARBP1	88	72.727	ENSGAGG00000012102	TARBP1	92	67.654	Gopherus_agassizii
ENSTTRG00000008707	TARBP1	84	79.861	ENSGGOG00000022879	TARBP1	93	79.922	Gorilla_gorilla
ENSTTRG00000008707	TARBP1	85	41.785	ENSHBUG00000008877	si:dkey-85a20.4	79	42.089	Haplochromis_burtoni
ENSTTRG00000008707	TARBP1	95	75.841	ENSHGLG00000011592	TARBP1	92	75.841	Heterocephalus_glaber_female
ENSTTRG00000008707	TARBP1	93	75.535	ENSHGLG00100015169	TARBP1	94	75.535	Heterocephalus_glaber_male
ENSTTRG00000008707	TARBP1	83	40.106	ENSIPUG00000005249	si:dkey-85a20.4	78	40.000	Ictalurus_punctatus
ENSTTRG00000008707	TARBP1	88	71.956	ENSSTOG00000032291	TARBP1	94	72.035	Ictidomys_tridecemlineatus
ENSTTRG00000008707	TARBP1	90	68.968	ENSJJAG00000017840	Tarbp1	94	68.998	Jaculus_jaculus
ENSTTRG00000008707	TARBP1	59	49.315	ENSKMAG00000017546	si:dkey-85a20.4	60	49.315	Kryptolebias_marmoratus
ENSTTRG00000008707	TARBP1	58	54.478	ENSLBEG00000012132	si:dkey-85a20.4	63	54.478	Labrus_bergylta
ENSTTRG00000008707	TARBP1	95	51.240	ENSLACG00000004337	TARBP1	79	51.492	Latimeria_chalumnae
ENSTTRG00000008707	TARBP1	83	47.615	ENSLOCG00000016214	si:dkey-85a20.4	80	47.498	Lepisosteus_oculatus
ENSTTRG00000008707	TARBP1	92	82.662	ENSLAFG00000011394	TARBP1	91	82.662	Loxodonta_africana
ENSTTRG00000008707	TARBP1	89	91.111	ENSMFAG00000041068	TARBP1	86	91.111	Macaca_fascicularis
ENSTTRG00000008707	TARBP1	89	91.111	ENSMMUG00000021703	TARBP1	86	91.111	Macaca_mulatta
ENSTTRG00000008707	TARBP1	95	86.747	ENSMNEG00000045002	TARBP1	91	83.721	Macaca_nemestrina
ENSTTRG00000008707	TARBP1	83	83.085	ENSMLEG00000044182	TARBP1	94	83.085	Mandrillus_leucophaeus
ENSTTRG00000008707	TARBP1	85	41.416	ENSMAMG00000021760	si:dkey-85a20.4	81	41.416	Mastacembelus_armatus
ENSTTRG00000008707	TARBP1	85	41.785	ENSMZEG00005005751	si:dkey-85a20.4	79	41.985	Maylandia_zebra
ENSTTRG00000008707	TARBP1	96	71.799	ENSMAUG00000020968	Tarbp1	92	71.799	Mesocricetus_auratus
ENSTTRG00000008707	TARBP1	90	91.111	ENSMICG00000015280	TARBP1	84	91.111	Microcebus_murinus
ENSTTRG00000008707	TARBP1	96	71.243	ENSMOCG00000004128	Tarbp1	92	71.243	Microtus_ochrogaster
ENSTTRG00000008707	TARBP1	81	42.328	ENSMMOG00000007795	si:dkey-85a20.4	78	42.597	Mola_mola
ENSTTRG00000008707	TARBP1	95	72.603	ENSMODG00000008504	TARBP1	91	72.451	Monodelphis_domestica
ENSTTRG00000008707	TARBP1	85	40.977	ENSMALG00000002916	si:dkey-85a20.4	80	41.271	Monopterus_albus
ENSTTRG00000008707	TARBP1	96	70.709	MGP_CAROLIEiJ_G0031729	Tarbp1	92	70.786	Mus_caroli
ENSTTRG00000008707	TARBP1	96	70.404	ENSMUSG00000090290	Tarbp1	92	70.404	Mus_musculus
ENSTTRG00000008707	TARBP1	96	70.906	MGP_PahariEiJ_G0023326	Tarbp1	92	70.906	Mus_pahari
ENSTTRG00000008707	TARBP1	96	70.481	MGP_SPRETEiJ_G0032846	Tarbp1	92	70.481	Mus_spretus
ENSTTRG00000008707	TARBP1	73	85.258	ENSMPUG00000002802	TARBP1	90	85.258	Mustela_putorius_furo
ENSTTRG00000008707	TARBP1	83	72.650	ENSMLUG00000002414	TARBP1	94	72.560	Myotis_lucifugus
ENSTTRG00000008707	TARBP1	95	83.735	ENSNLEG00000002518	TARBP1	91	83.066	Nomascus_leucogenys
ENSTTRG00000008707	TARBP1	61	77.494	ENSMEUG00000011370	-	58	77.494	Notamacropus_eugenii
ENSTTRG00000008707	TARBP1	67	84.601	ENSOPRG00000013822	TARBP1	64	84.601	Ochotona_princeps
ENSTTRG00000008707	TARBP1	95	74.312	ENSODEG00000005238	TARBP1	89	78.481	Octodon_degus
ENSTTRG00000008707	TARBP1	85	41.474	ENSONIG00000009789	si:dkey-85a20.4	94	41.474	Oreochromis_niloticus
ENSTTRG00000008707	TARBP1	95	82.143	ENSOCUG00000017418	TARBP1	91	81.998	Oryctolagus_cuniculus
ENSTTRG00000008707	TARBP1	81	44.361	ENSORLG00000010529	si:dkey-85a20.4	75	47.222	Oryzias_latipes
ENSTTRG00000008707	TARBP1	81	44.361	ENSORLG00020019264	si:dkey-85a20.4	75	47.222	Oryzias_latipes_hni
ENSTTRG00000008707	TARBP1	81	43.609	ENSORLG00015003276	si:dkey-85a20.4	75	46.296	Oryzias_latipes_hsok
ENSTTRG00000008707	TARBP1	95	80.814	ENSOGAG00000002379	TARBP1	91	79.846	Otolemur_garnettii
ENSTTRG00000008707	TARBP1	93	85.267	ENSOARG00000003434	TARBP1	93	85.267	Ovis_aries
ENSTTRG00000008707	TARBP1	83	83.346	ENSPPAG00000028097	TARBP1	94	83.346	Pan_paniscus
ENSTTRG00000008707	TARBP1	95	86.145	ENSPPRG00000013561	TARBP1	95	86.145	Panthera_pardus
ENSTTRG00000008707	TARBP1	79	94.382	ENSPTIG00000009281	TARBP1	91	94.382	Panthera_tigris_altaica
ENSTTRG00000008707	TARBP1	95	84.940	ENSPTRG00000002124	TARBP1	91	83.066	Pan_troglodytes
ENSTTRG00000008707	TARBP1	95	86.145	ENSPANG00000021933	TARBP1	86	91.852	Papio_anubis
ENSTTRG00000008707	TARBP1	85	43.123	ENSPKIG00000016716	si:dkey-85a20.4	78	43.607	Paramormyrops_kingsleyae
ENSTTRG00000008707	TARBP1	78	65.924	ENSPSIG00000010699	TARBP1	94	65.677	Pelodiscus_sinensis
ENSTTRG00000008707	TARBP1	93	72.387	ENSPEMG00000006888	Tarbp1	92	72.387	Peromyscus_maniculatus_bairdii
ENSTTRG00000008707	TARBP1	87	84.000	ENSPCIG00000029710	TARBP1	89	84.000	Phascolarctos_cinereus
ENSTTRG00000008707	TARBP1	85	40.807	ENSPFOG00000013020	si:dkey-85a20.4	92	40.899	Poecilia_formosa
ENSTTRG00000008707	TARBP1	85	40.936	ENSPLAG00000006044	si:dkey-85a20.4	79	40.802	Poecilia_latipinna
ENSTTRG00000008707	TARBP1	85	41.106	ENSPMEG00000017857	si:dkey-85a20.4	79	40.823	Poecilia_mexicana
ENSTTRG00000008707	TARBP1	85	41.338	ENSPREG00000022753	si:dkey-85a20.4	79	41.150	Poecilia_reticulata
ENSTTRG00000008707	TARBP1	86	89.630	ENSPPYG00000000102	TARBP1	90	89.630	Pongo_abelii
ENSTTRG00000008707	TARBP1	81	90.541	ENSPCAG00000004808	TARBP1	77	90.541	Procavia_capensis
ENSTTRG00000008707	TARBP1	92	90.370	ENSPCOG00000005666	TARBP1	87	90.370	Propithecus_coquereli
ENSTTRG00000008707	TARBP1	96	79.167	ENSPVAG00000014798	TARBP1	92	78.947	Pteropus_vampyrus
ENSTTRG00000008707	TARBP1	85	40.875	ENSPNYG00000019135	si:dkey-85a20.4	79	41.059	Pundamilia_nyererei
ENSTTRG00000008707	TARBP1	96	66.743	ENSRNOG00000053574	Tarbp1	92	66.743	Rattus_norvegicus
ENSTTRG00000008707	TARBP1	87	84.483	ENSRBIG00000043362	TARBP1	89	84.483	Rhinopithecus_bieti
ENSTTRG00000008707	TARBP1	90	86.207	ENSRROG00000029527	TARBP1	91	82.838	Rhinopithecus_roxellana
ENSTTRG00000008707	TARBP1	88	82.353	ENSSBOG00000034503	TARBP1	94	82.353	Saimiri_boliviensis_boliviensis
ENSTTRG00000008707	TARBP1	82	72.379	ENSSHAG00000000013	TARBP1	94	72.379	Sarcophilus_harrisii
ENSTTRG00000008707	TARBP1	83	41.616	ENSSFOG00015002660	si:dkey-85a20.4	91	42.484	Scleropages_formosus
ENSTTRG00000008707	TARBP1	83	41.145	ENSSMAG00000007081	si:dkey-85a20.4	78	41.275	Scophthalmus_maximus
ENSTTRG00000008707	TARBP1	85	39.668	ENSSDUG00000023566	si:dkey-85a20.4	80	39.879	Seriola_dumerili
ENSTTRG00000008707	TARBP1	85	41.623	ENSSLDG00000020200	si:dkey-85a20.4	79	42.057	Seriola_lalandi_dorsalis
ENSTTRG00000008707	TARBP1	86	86.761	ENSSARG00000012207	TARBP1	82	86.761	Sorex_araneus
ENSTTRG00000008707	TARBP1	96	62.718	ENSSPUG00000015364	TARBP1	91	62.718	Sphenodon_punctatus
ENSTTRG00000008707	TARBP1	85	40.919	ENSSPAG00000007213	si:dkey-85a20.4	81	40.801	Stegastes_partitus
ENSTTRG00000008707	TARBP1	96	92.169	ENSSSCG00000010160	TARBP1	91	91.813	Sus_scrofa
ENSTTRG00000008707	TARBP1	80	63.350	ENSTGUG00000010214	TARBP1	94	63.188	Taeniopygia_guttata
ENSTTRG00000008707	TARBP1	83	39.725	ENSTNIG00000016586	si:dkey-85a20.4	94	39.878	Tetraodon_nigroviridis
ENSTTRG00000008707	TARBP1	75	98.113	ENSUMAG00000006730	TARBP1	85	98.113	Ursus_maritimus
ENSTTRG00000008707	TARBP1	64	88.415	ENSVPAG00000007665	TARBP1	68	88.415	Vicugna_pacos
ENSTTRG00000008707	TARBP1	84	84.981	ENSVVUG00000007460	TARBP1	89	92.222	Vulpes_vulpes
ENSTTRG00000008707	TARBP1	83	51.846	ENSXETG00000016224	tarbp1	94	51.769	Xenopus_tropicalis
ENSTTRG00000008707	TARBP1	76	45.889	ENSXCOG00000011779	si:dkey-85a20.4	86	45.889	Xiphophorus_couchianus
ENSTTRG00000008707	TARBP1	66	42.505	ENSXMAG00000009600	si:dkey-85a20.4	98	42.165	Xiphophorus_maculatus