EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000008857 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 10869 bases
Position: chrGeneScaffold_3353:160497-171365
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000008399	KH_1	PF00013.29	1.2e-07	1	1
ENSTTRP00000008399	zf-CCHC	PF00098.23	7.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000008857	SF1-201	1581	-	ENSTTRP00000008399	526 (aa)	-	UPI00018B744A

Gene Model

Click here to download ENSTTRG00000008857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000008857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000008857	SF1	67	76.203	ENSAPOG00000012341	sf1	58	71.875	Acanthochromis_polyacanthus
ENSTTRG00000008857	SF1	96	95.349	ENSAMEG00000017828	SF1	81	94.981	Ailuropoda_melanoleuca
ENSTTRG00000008857	SF1	67	75.668	ENSAOCG00000010934	sf1	58	71.875	Amphiprion_ocellaris
ENSTTRG00000008857	SF1	67	75.668	ENSAPEG00000009498	sf1	58	71.875	Amphiprion_percula
ENSTTRG00000008857	SF1	96	82.171	ENSANAG00000022607	-	88	83.288	Aotus_nancymaae
ENSTTRG00000008857	SF1	100	95.531	ENSANAG00000026664	-	95	95.531	Aotus_nancymaae
ENSTTRG00000008857	SF1	67	79.133	ENSACLG00000007633	sf1	61	72.902	Astatotilapia_calliptera
ENSTTRG00000008857	SF1	68	80.481	ENSAMXG00000003630	sf1	53	75.669	Astyanax_mexicanus
ENSTTRG00000008857	SF1	96	95.543	ENSBTAG00000001035	SF1	81	95.174	Bos_taurus
ENSTTRG00000008857	SF1	100	95.717	ENSCJAG00000002780	SF1	81	95.174	Callithrix_jacchus
ENSTTRG00000008857	SF1	96	95.543	ENSCAFG00000014239	SF1	81	95.174	Canis_familiaris
ENSTTRG00000008857	SF1	96	95.543	ENSCAFG00020014381	SF1	81	95.174	Canis_lupus_dingo
ENSTTRG00000008857	SF1	100	95.717	ENSCHIG00000025867	SF1	98	95.717	Capra_hircus
ENSTTRG00000008857	SF1	63	93.939	ENSTSYG00000033618	SF1	91	98.361	Carlito_syrichta
ENSTTRG00000008857	SF1	80	94.186	ENSCAPG00000010762	SF1	79	93.409	Cavia_aperea
ENSTTRG00000008857	SF1	100	95.345	ENSCPOG00000012290	SF1	100	95.345	Cavia_porcellus
ENSTTRG00000008857	SF1	96	80.814	ENSCCAG00000023781	-	88	83.149	Cebus_capucinus
ENSTTRG00000008857	SF1	100	95.717	ENSCCAG00000037881	SF1	93	94.192	Cebus_capucinus
ENSTTRG00000008857	SF1	96	95.543	ENSCATG00000011564	SF1	94	94.444	Cercocebus_atys
ENSTTRG00000008857	SF1	100	95.717	ENSCSAG00000007258	SF1	98	95.717	Chlorocebus_sabaeus
ENSTTRG00000008857	SF1	76	88.107	ENSCHOG00000006008	SF1	79	87.234	Choloepus_hoffmanni
ENSTTRG00000008857	SF1	96	82.171	ENSCPBG00000023763	SF1	66	80.814	Chrysemys_picta_bellii
ENSTTRG00000008857	SF1	67	54.011	ENSCING00000005564	-	74	56.117	Ciona_intestinalis
ENSTTRG00000008857	SF1	95	49.711	ENSCSAVG00000009055	-	56	61.468	Ciona_savignyi
ENSTTRG00000008857	SF1	96	95.543	ENSCANG00000042201	SF1	88	93.750	Colobus_angolensis_palliatus
ENSTTRG00000008857	SF1	96	95.543	ENSCGRG00001003677	Sf1	81	95.174	Cricetulus_griseus_chok1gshd
ENSTTRG00000008857	SF1	100	95.531	ENSCGRG00000001708	Sf1	99	95.531	Cricetulus_griseus_crigri
ENSTTRG00000008857	SF1	84	63.793	ENSCSEG00000014375	sf1	57	71.053	Cynoglossus_semilaevis
ENSTTRG00000008857	SF1	68	79.891	ENSCVAG00000001670	sf1	63	74.201	Cyprinodon_variegatus
ENSTTRG00000008857	SF1	71	75.765	ENSDARG00000008188	sf1	70	73.206	Danio_rerio
ENSTTRG00000008857	SF1	100	95.158	ENSDNOG00000001282	SF1	98	95.158	Dasypus_novemcinctus
ENSTTRG00000008857	SF1	96	95.543	ENSDORG00000016334	Sf1	81	95.174	Dipodomys_ordii
ENSTTRG00000008857	SF1	96	87.209	ENSETEG00000012830	SF1	72	86.100	Echinops_telfairi
ENSTTRG00000008857	SF1	100	95.345	ENSEASG00005018272	SF1	98	95.345	Equus_asinus_asinus
ENSTTRG00000008857	SF1	100	95.531	ENSECAG00000024544	SF1	98	95.531	Equus_caballus
ENSTTRG00000008857	SF1	71	93.282	ENSEEUG00000001058	SF1	98	93.282	Erinaceus_europaeus
ENSTTRG00000008857	SF1	67	76.613	ENSELUG00000013225	sf1	53	74.576	Esox_lucius
ENSTTRG00000008857	SF1	100	95.717	ENSFCAG00000012231	SF1	81	95.174	Felis_catus
ENSTTRG00000008857	SF1	83	92.650	ENSFDAG00000009833	SF1	79	93.864	Fukomys_damarensis
ENSTTRG00000008857	SF1	68	76.720	ENSFHEG00000022656	sf1	59	72.447	Fundulus_heteroclitus
ENSTTRG00000008857	SF1	68	79.357	ENSGAFG00000019284	sf1	76	75.735	Gambusia_affinis
ENSTTRG00000008857	SF1	68	75.263	ENSGACG00000000826	sf1	66	71.990	Gasterosteus_aculeatus
ENSTTRG00000008857	SF1	84	83.921	ENSGAGG00000021691	SF1	72	80.814	Gopherus_agassizii
ENSTTRG00000008857	SF1	96	95.543	ENSHGLG00000009541	SF1	81	95.174	Heterocephalus_glaber_female
ENSTTRG00000008857	SF1	83	82.151	ENSHGLG00100008255	-	92	81.720	Heterocephalus_glaber_male
ENSTTRG00000008857	SF1	81	84.138	ENSHGLG00100008076	-	87	82.176	Heterocephalus_glaber_male
ENSTTRG00000008857	SF1	80	94.651	ENSHGLG00100013879	-	80	94.626	Heterocephalus_glaber_male
ENSTTRG00000008857	SF1	69	76.378	ENSHCOG00000011388	sf1	58	71.429	Hippocampus_comes
ENSTTRG00000008857	SF1	96	95.543	ENSSTOG00000009790	-	83	95.174	Ictidomys_tridecemlineatus
ENSTTRG00000008857	SF1	85	81.938	ENSSTOG00000024353	-	77	83.463	Ictidomys_tridecemlineatus
ENSTTRG00000008857	SF1	96	95.349	ENSJJAG00000011788	Sf1	81	94.981	Jaculus_jaculus
ENSTTRG00000008857	SF1	94	56.591	ENSLBEG00000019836	sf1	50	80.734	Labrus_bergylta
ENSTTRG00000008857	SF1	75	73.671	ENSLACG00000018493	SF1	73	72.530	Latimeria_chalumnae
ENSTTRG00000008857	SF1	68	80.053	ENSLOCG00000002130	sf1	58	75.556	Lepisosteus_oculatus
ENSTTRG00000008857	SF1	96	95.155	ENSLAFG00000007201	SF1	80	94.788	Loxodonta_africana
ENSTTRG00000008857	SF1	96	95.543	ENSMFAG00000033122	SF1	93	94.444	Macaca_fascicularis
ENSTTRG00000008857	SF1	100	95.717	ENSMMUG00000022606	SF1	98	95.717	Macaca_mulatta
ENSTTRG00000008857	SF1	100	94.834	ENSMNEG00000037901	SF1	93	94.444	Macaca_nemestrina
ENSTTRG00000008857	SF1	96	95.543	ENSMLEG00000040706	SF1	93	94.444	Mandrillus_leucophaeus
ENSTTRG00000008857	SF1	96	95.543	ENSMAUG00000014064	Sf1	81	95.174	Mesocricetus_auratus
ENSTTRG00000008857	SF1	100	95.717	ENSMICG00000001202	SF1	93	93.955	Microcebus_murinus
ENSTTRG00000008857	SF1	96	95.349	ENSMOCG00000022038	Sf1	81	94.981	Microtus_ochrogaster
ENSTTRG00000008857	SF1	67	76.230	ENSMMOG00000020474	sf1	59	72.059	Mola_mola
ENSTTRG00000008857	SF1	75	92.892	ENSMODG00000029407	SF1	89	92.892	Monodelphis_domestica
ENSTTRG00000008857	SF1	67	78.297	ENSMALG00000020521	sf1	67	71.913	Monopterus_albus
ENSTTRG00000008857	SF1	100	95.717	MGP_CAROLIEiJ_G0022607	Sf1	98	95.717	Mus_caroli
ENSTTRG00000008857	SF1	100	95.717	ENSMUSG00000024949	Sf1	98	95.717	Mus_musculus
ENSTTRG00000008857	SF1	100	95.717	MGP_PahariEiJ_G0014101	Sf1	98	95.717	Mus_pahari
ENSTTRG00000008857	SF1	100	95.717	MGP_SPRETEiJ_G0023518	Sf1	98	95.717	Mus_spretus
ENSTTRG00000008857	SF1	96	95.349	ENSMPUG00000012684	SF1	81	94.981	Mustela_putorius_furo
ENSTTRG00000008857	SF1	83	89.462	ENSMLUG00000029800	-	76	89.842	Myotis_lucifugus
ENSTTRG00000008857	SF1	96	95.155	ENSMLUG00000015217	-	81	94.788	Myotis_lucifugus
ENSTTRG00000008857	SF1	96	95.349	ENSNGAG00000005550	Sf1	81	94.981	Nannospalax_galili
ENSTTRG00000008857	SF1	67	79.133	ENSNBRG00000017606	sf1	60	74.453	Neolamprologus_brichardi
ENSTTRG00000008857	SF1	96	95.543	ENSNLEG00000005236	-	88	93.750	Nomascus_leucogenys
ENSTTRG00000008857	SF1	99	92.279	ENSMEUG00000013424	SF1	100	93.032	Notamacropus_eugenii
ENSTTRG00000008857	SF1	92	94.747	ENSOPRG00000005008	SF1	100	94.141	Ochotona_princeps
ENSTTRG00000008857	SF1	85	92.544	ENSODEG00000006102	-	79	85.135	Octodon_degus
ENSTTRG00000008857	SF1	74	81.704	ENSOANG00000002909	SF1	94	82.552	Ornithorhynchus_anatinus
ENSTTRG00000008857	SF1	96	95.349	ENSOCUG00000026486	SF1	82	94.981	Oryctolagus_cuniculus
ENSTTRG00000008857	SF1	70	75.969	ENSORLG00000011853	sf1	58	72.881	Oryzias_latipes
ENSTTRG00000008857	SF1	70	75.969	ENSORLG00020011834	sf1	58	72.881	Oryzias_latipes_hni
ENSTTRG00000008857	SF1	68	75.661	ENSORLG00015012855	sf1	58	72.397	Oryzias_latipes_hsok
ENSTTRG00000008857	SF1	96	95.543	ENSOGAG00000016196	SF1	81	95.174	Otolemur_garnettii
ENSTTRG00000008857	SF1	93	95.409	ENSPPAG00000002799	-	95	94.192	Pan_paniscus
ENSTTRG00000008857	SF1	100	95.717	ENSPPRG00000013566	SF1	82	95.030	Panthera_pardus
ENSTTRG00000008857	SF1	80	94.651	ENSPTIG00000016141	SF1	79	93.864	Panthera_tigris_altaica
ENSTTRG00000008857	SF1	100	95.717	ENSPTRG00000003846	SF1	95	94.363	Pan_troglodytes
ENSTTRG00000008857	SF1	100	95.717	ENSPANG00000020754	SF1	98	95.717	Papio_anubis
ENSTTRG00000008857	SF1	59	73.700	ENSPKIG00000012116	sf1	84	70.448	Paramormyrops_kingsleyae
ENSTTRG00000008857	SF1	64	86.176	ENSPSIG00000003610	SF1	81	79.469	Pelodiscus_sinensis
ENSTTRG00000008857	SF1	96	95.543	ENSPEMG00000010463	Sf1	81	95.174	Peromyscus_maniculatus_bairdii
ENSTTRG00000008857	SF1	96	92.248	ENSPCIG00000018173	SF1	82	92.664	Phascolarctos_cinereus
ENSTTRG00000008857	SF1	68	80.435	ENSPFOG00000013683	sf1	66	75.735	Poecilia_formosa
ENSTTRG00000008857	SF1	68	79.045	ENSPLAG00000018076	sf1	61	74.580	Poecilia_latipinna
ENSTTRG00000008857	SF1	68	79.045	ENSPMEG00000005726	sf1	62	74.820	Poecilia_mexicana
ENSTTRG00000008857	SF1	68	78.515	ENSPREG00000004155	sf1	59	74.101	Poecilia_reticulata
ENSTTRG00000008857	SF1	96	95.543	ENSPPYG00000003098	-	98	95.543	Pongo_abelii
ENSTTRG00000008857	SF1	100	94.972	ENSPCAG00000013631	SF1	80	94.972	Procavia_capensis
ENSTTRG00000008857	SF1	96	95.543	ENSPCOG00000027546	SF1	93	93.955	Propithecus_coquereli
ENSTTRG00000008857	SF1	100	95.158	ENSPVAG00000016938	SF1	81	95.158	Pteropus_vampyrus
ENSTTRG00000008857	SF1	68	80.267	ENSPNAG00000013072	sf1	59	73.798	Pygocentrus_nattereri
ENSTTRG00000008857	SF1	96	95.543	ENSRNOG00000021085	Sf1	92	95.680	Rattus_norvegicus
ENSTTRG00000008857	SF1	99	88.257	ENSRBIG00000042818	SF1	88	93.750	Rhinopithecus_bieti
ENSTTRG00000008857	SF1	97	95.594	ENSRROG00000045655	SF1	100	95.594	Rhinopithecus_roxellana
ENSTTRG00000008857	SF1	53	40.789	YLR116W	MSL5	61	40.584	Saccharomyces_cerevisiae
ENSTTRG00000008857	SF1	85	79.085	ENSSBOG00000022267	-	97	76.296	Saimiri_boliviensis_boliviensis
ENSTTRG00000008857	SF1	73	87.750	ENSSHAG00000006841	SF1	73	88.000	Sarcophilus_harrisii
ENSTTRG00000008857	SF1	73	75.377	ENSSFOG00015021978	sf1	55	71.429	Scleropages_formosus
ENSTTRG00000008857	SF1	75	71.971	ENSSMAG00000007549	sf1	62	71.905	Scophthalmus_maximus
ENSTTRG00000008857	SF1	96	85.300	ENSSARG00000008180	SF1	100	88.201	Sorex_araneus
ENSTTRG00000008857	SF1	81	80.392	ENSSPUG00000012907	SF1	86	76.775	Sphenodon_punctatus
ENSTTRG00000008857	SF1	67	75.936	ENSSPAG00000019060	sf1	58	70.922	Stegastes_partitus
ENSTTRG00000008857	SF1	100	95.531	ENSSSCG00000013021	SF1	98	95.531	Sus_scrofa
ENSTTRG00000008857	SF1	97	60.762	ENSTNIG00000004820	sf1	77	68.704	Tetraodon_nigroviridis
ENSTTRG00000008857	SF1	85	87.555	ENSTBEG00000013133	SF1	66	87.500	Tupaia_belangeri
ENSTTRG00000008857	SF1	78	94.189	ENSUAMG00000011977	SF1	78	94.189	Ursus_americanus
ENSTTRG00000008857	SF1	85	94.967	ENSUMAG00000007268	SF1	88	94.956	Ursus_maritimus
ENSTTRG00000008857	SF1	65	99.057	ENSVPAG00000011912	SF1	65	99.048	Vicugna_pacos
ENSTTRG00000008857	SF1	100	95.717	ENSVVUG00000028585	SF1	98	95.717	Vulpes_vulpes
ENSTTRG00000008857	SF1	85	72.043	ENSXETG00000008434	sf1	67	76.471	Xenopus_tropicalis
ENSTTRG00000008857	SF1	67	80.274	ENSXCOG00000003704	sf1	75	76.238	Xiphophorus_couchianus
ENSTTRG00000008857	SF1	68	78.571	ENSXMAG00000007822	sf1	61	74.820	Xiphophorus_maculatus