EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000009001 (Gene tree)
Gene ID: -
Gene Symbol: SMARCAL1
Alias: HARP|HHARP
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a like 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 51384 bases
Position: chrGeneScaffold_908:331680-383063
Accession: 11102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000008537	ResIII	PF04851.15	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000009001	SMARCAL1-201	2835	-	ENSTTRP00000008537	944 (aa)	-	UPI00018B816A

Gene Model

Click here to download ENSTTRG00000009001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000009001's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000009001	SMARCAL1	100	70.355	ENSG00000138375	SMARCAL1	100	100.000	Homo_sapiens
ENSTTRG00000009001	SMARCAL1	99	45.005	ENSAPOG00000020156	SMARCAL1	99	44.853	Acanthochromis_polyacanthus
ENSTTRG00000009001	SMARCAL1	69	52.799	ENSACIG00000001500	smarcal1	84	52.799	Amphilophus_citrinellus
ENSTTRG00000009001	SMARCAL1	97	44.551	ENSAOCG00000014266	SMARCAL1	100	44.551	Amphiprion_ocellaris
ENSTTRG00000009001	SMARCAL1	99	44.479	ENSAPEG00000015861	SMARCAL1	99	47.068	Amphiprion_percula
ENSTTRG00000009001	SMARCAL1	99	44.261	ENSATEG00000020624	SMARCAL1	99	44.364	Anabas_testudineus
ENSTTRG00000009001	SMARCAL1	99	46.941	ENSAPLG00000009864	SMARCAL1	100	47.141	Anas_platyrhynchos
ENSTTRG00000009001	SMARCAL1	99	48.144	ENSACAG00000004612	SMARCAL1	99	47.944	Anolis_carolinensis
ENSTTRG00000009001	SMARCAL1	96	44.813	ENSACLG00000015990	SMARCAL1	97	45.366	Astatotilapia_calliptera
ENSTTRG00000009001	SMARCAL1	99	45.983	ENSAMXG00000003350	smarcal1	99	46.146	Astyanax_mexicanus
ENSTTRG00000009001	SMARCAL1	97	56.698	ENSCPBG00000013599	SMARCAL1	99	56.698	Chrysemys_picta_bellii
ENSTTRG00000009001	SMARCAL1	66	40.476	ENSCING00000009308	-	99	39.655	Ciona_intestinalis
ENSTTRG00000009001	SMARCAL1	97	45.151	ENSCSEG00000010785	SMARCAL1	99	44.898	Cynoglossus_semilaevis
ENSTTRG00000009001	SMARCAL1	99	42.992	ENSCVAG00000018780	SMARCAL1	99	43.156	Cyprinodon_variegatus
ENSTTRG00000009001	SMARCAL1	56	53.259	ENSEBUG00000011906	SMARCAL1	99	43.958	Eptatretus_burgeri
ENSTTRG00000009001	SMARCAL1	74	51.393	ENSELUG00000010440	-	70	50.875	Esox_lucius
ENSTTRG00000009001	SMARCAL1	99	48.377	ENSFALG00000003981	SMARCAL1	99	48.328	Ficedula_albicollis
ENSTTRG00000009001	SMARCAL1	99	43.280	ENSFHEG00000008380	SMARCAL1	99	43.280	Fundulus_heteroclitus
ENSTTRG00000009001	SMARCAL1	52	63.070	ENSGMOG00000010034	smarcal1	91	63.070	Gadus_morhua
ENSTTRG00000009001	SMARCAL1	99	47.557	ENSGALG00000011475	RPL37A	99	47.709	Gallus_gallus
ENSTTRG00000009001	SMARCAL1	71	52.523	ENSGACG00000006073	SMARCAL1	100	52.788	Gasterosteus_aculeatus
ENSTTRG00000009001	SMARCAL1	92	49.352	ENSGAGG00000015660	SMARCAL1	99	49.242	Gopherus_agassizii
ENSTTRG00000009001	SMARCAL1	96	44.610	ENSHBUG00000002973	smarcal1	97	44.706	Haplochromis_burtoni
ENSTTRG00000009001	SMARCAL1	70	52.853	ENSHCOG00000017921	smarcal1	79	52.853	Hippocampus_comes
ENSTTRG00000009001	SMARCAL1	95	51.511	ENSKMAG00000012023	SMARCAL1	99	44.505	Kryptolebias_marmoratus
ENSTTRG00000009001	SMARCAL1	92	50.151	ENSLBEG00000022915	smarcal1	99	49.925	Labrus_bergylta
ENSTTRG00000009001	SMARCAL1	56	60.112	ENSLBEG00000003493	smarcal1	62	59.813	Labrus_bergylta
ENSTTRG00000009001	SMARCAL1	90	51.818	ENSLACG00000010974	SMARCAL1	91	51.818	Latimeria_chalumnae
ENSTTRG00000009001	SMARCAL1	92	46.050	ENSLOCG00000009637	smarcal1	99	46.275	Lepisosteus_oculatus
ENSTTRG00000009001	SMARCAL1	96	45.207	ENSMAMG00000000828	SMARCAL1	99	45.207	Mastacembelus_armatus
ENSTTRG00000009001	SMARCAL1	96	44.706	ENSMZEG00005007660	SMARCAL1	97	45.259	Maylandia_zebra
ENSTTRG00000009001	SMARCAL1	99	49.177	ENSMGAG00000011658	SMARCAL1	99	49.177	Meleagris_gallopavo
ENSTTRG00000009001	SMARCAL1	92	49.317	ENSMMOG00000003842	smarcal1	94	49.317	Mola_mola
ENSTTRG00000009001	SMARCAL1	99	54.323	ENSMODG00000015544	SMARCAL1	99	54.323	Monodelphis_domestica
ENSTTRG00000009001	SMARCAL1	69	52.273	ENSNBRG00000016273	smarcal1	85	52.273	Neolamprologus_brichardi
ENSTTRG00000009001	SMARCAL1	92	56.448	ENSMEUG00000004395	SMARCAL1	100	56.335	Notamacropus_eugenii
ENSTTRG00000009001	SMARCAL1	96	44.802	ENSONIG00000009036	smarcal1	100	53.226	Oreochromis_niloticus
ENSTTRG00000009001	SMARCAL1	96	45.494	ENSORLG00000016455	SMARCAL1	97	45.494	Oryzias_latipes
ENSTTRG00000009001	SMARCAL1	74	51.549	ENSORLG00020001610	SMARCAL1	79	51.549	Oryzias_latipes_hni
ENSTTRG00000009001	SMARCAL1	96	45.386	ENSORLG00015001865	SMARCAL1	97	45.494	Oryzias_latipes_hsok
ENSTTRG00000009001	SMARCAL1	96	51.146	ENSOMEG00000001845	smarcal1	97	51.146	Oryzias_melastigma
ENSTTRG00000009001	SMARCAL1	99	43.750	ENSPMGG00000019092	SMARCAL1	99	43.841	Periophthalmus_magnuspinnatus
ENSTTRG00000009001	SMARCAL1	99	52.410	ENSPCIG00000022514	SMARCAL1	99	53.702	Phascolarctos_cinereus
ENSTTRG00000009001	SMARCAL1	75	49.860	ENSPFOG00000000560	SMARCAL1	96	44.651	Poecilia_formosa
ENSTTRG00000009001	SMARCAL1	75	50.209	ENSPMEG00000018146	SMARCAL1	96	44.869	Poecilia_mexicana
ENSTTRG00000009001	SMARCAL1	99	46.688	ENSPNAG00000014900	smarcal1	94	46.372	Pygocentrus_nattereri
ENSTTRG00000009001	SMARCAL1	99	51.461	ENSSHAG00000013538	SMARCAL1	100	51.461	Sarcophilus_harrisii
ENSTTRG00000009001	SMARCAL1	99	43.288	ENSSMAG00000010427	SMARCAL1	99	43.392	Scophthalmus_maximus
ENSTTRG00000009001	SMARCAL1	96	45.504	ENSSDUG00000017470	SMARCAL1	95	46.046	Seriola_dumerili
ENSTTRG00000009001	SMARCAL1	98	44.550	ENSSLDG00000007224	SMARCAL1	99	45.079	Seriola_lalandi_dorsalis
ENSTTRG00000009001	SMARCAL1	99	48.759	ENSSPUG00000015369	SMARCAL1	99	48.949	Sphenodon_punctatus
ENSTTRG00000009001	SMARCAL1	69	52.424	ENSSPAG00000003742	smarcal1	99	52.576	Stegastes_partitus
ENSTTRG00000009001	SMARCAL1	94	69.541	ENSSSCG00000035501	SMARCAL1	99	69.541	Sus_scrofa
ENSTTRG00000009001	SMARCAL1	71	58.050	ENSTGUG00000005079	SMARCAL1	100	57.903	Taeniopygia_guttata
ENSTTRG00000009001	SMARCAL1	74	48.023	ENSTRUG00000010701	SMARCAL1	81	48.023	Takifugu_rubripes
ENSTTRG00000009001	SMARCAL1	96	48.666	ENSXETG00000000465	smarcal1	97	48.666	Xenopus_tropicalis