EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000009189 (Gene tree)
Gene ID: -
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 54378 bases
Position: chrGeneScaffold_1967:245564-299941
Accession: 13995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000008715	zf-C2H2	PF00096.26	1.7e-33	1	5
ENSTTRP00000008715	zf-C2H2	PF00096.26	1.7e-33	2	5
ENSTTRP00000008715	zf-C2H2	PF00096.26	1.7e-33	3	5
ENSTTRP00000008715	zf-C2H2	PF00096.26	1.7e-33	4	5
ENSTTRP00000008715	zf-C2H2	PF00096.26	1.7e-33	5	5
ENSTTRP00000008715	zf-met	PF12874.7	3.4e-06	1	2
ENSTTRP00000008715	zf-met	PF12874.7	3.4e-06	2	2
ENSTTRP00000008715	zf-C2H2_jaz	PF12171.8	3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000009191	PRDM10-201	3444	-	ENSTTRP00000008715	1147 (aa)	-	UPI00018B7CF6

Gene Model

Click here to download ENSTTRG00000009189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000009189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000009189	PRDM10	55	35.714	ENSTTRG00000010996	PRDM5	97	35.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000009189	PRDM10	100	90.690	ENSG00000170325	PRDM10	100	92.175	Homo_sapiens
ENSTTRG00000009189	PRDM10	100	88.397	ENSAMEG00000002425	PRDM10	100	89.065	Ailuropoda_melanoleuca
ENSTTRG00000009189	PRDM10	100	83.074	ENSAPLG00000004858	PRDM10	100	83.247	Anas_platyrhynchos
ENSTTRG00000009189	PRDM10	100	82.962	ENSANAG00000022064	PRDM10	100	76.244	Aotus_nancymaae
ENSTTRG00000009189	PRDM10	100	94.021	ENSBTAG00000019001	PRDM10	100	95.444	Bos_taurus
ENSTTRG00000009189	PRDM10	100	90.595	ENSCJAG00000009235	PRDM10	100	91.113	Callithrix_jacchus
ENSTTRG00000009189	PRDM10	100	90.225	ENSCAFG00000010164	PRDM10	100	90.917	Canis_familiaris
ENSTTRG00000009189	PRDM10	100	89.040	ENSCAFG00020010152	PRDM10	100	89.720	Canis_lupus_dingo
ENSTTRG00000009189	PRDM10	100	94.021	ENSCHIG00000026530	PRDM10	100	94.367	Capra_hircus
ENSTTRG00000009189	PRDM10	100	91.638	ENSTSYG00000000544	PRDM10	100	92.155	Carlito_syrichta
ENSTTRG00000009189	PRDM10	100	83.904	ENSCAPG00000017296	PRDM10	100	84.418	Cavia_aperea
ENSTTRG00000009189	PRDM10	99	79.762	ENSCPOG00000000389	PRDM10	99	79.932	Cavia_porcellus
ENSTTRG00000009189	PRDM10	100	90.509	ENSCCAG00000024567	PRDM10	100	91.027	Cebus_capucinus
ENSTTRG00000009189	PRDM10	100	91.192	ENSCATG00000040031	PRDM10	100	91.796	Cercocebus_atys
ENSTTRG00000009189	PRDM10	100	89.050	ENSCLAG00000014605	PRDM10	100	89.820	Chinchilla_lanigera
ENSTTRG00000009189	PRDM10	100	91.105	ENSCSAG00000002202	PRDM10	100	91.710	Chlorocebus_sabaeus
ENSTTRG00000009189	PRDM10	100	80.516	ENSCPBG00000026880	PRDM10	99	81.083	Chrysemys_picta_bellii
ENSTTRG00000009189	PRDM10	100	90.854	ENSCANG00000032669	PRDM10	100	91.372	Colobus_angolensis_palliatus
ENSTTRG00000009189	PRDM10	100	89.129	ENSCGRG00001021647	Prdm10	98	89.819	Cricetulus_griseus_chok1gshd
ENSTTRG00000009189	PRDM10	100	89.129	ENSCGRG00000006562	Prdm10	98	89.819	Cricetulus_griseus_crigri
ENSTTRG00000009189	PRDM10	83	90.966	ENSDNOG00000001366	PRDM10	95	91.282	Dasypus_novemcinctus
ENSTTRG00000009189	PRDM10	100	89.542	ENSDORG00000014292	Prdm10	100	90.061	Dipodomys_ordii
ENSTTRG00000009189	PRDM10	100	91.602	ENSEASG00005022914	PRDM10	100	93.253	Equus_asinus_asinus
ENSTTRG00000009189	PRDM10	100	91.515	ENSECAG00000011499	PRDM10	100	93.166	Equus_caballus
ENSTTRG00000009189	PRDM10	98	92.328	ENSFCAG00000004111	PRDM10	96	93.034	Felis_catus
ENSTTRG00000009189	PRDM10	100	79.365	ENSFALG00000004873	PRDM10	100	78.930	Ficedula_albicollis
ENSTTRG00000009189	PRDM10	100	88.280	ENSFDAG00000017311	PRDM10	100	88.533	Fukomys_damarensis
ENSTTRG00000009189	PRDM10	97	83.738	ENSGALG00000033660	PRDM10	99	83.827	Gallus_gallus
ENSTTRG00000009189	PRDM10	92	62.963	ENSGACG00000012293	prdm10	99	63.233	Gasterosteus_aculeatus
ENSTTRG00000009189	PRDM10	100	81.568	ENSGAGG00000012523	PRDM10	99	81.998	Gopherus_agassizii
ENSTTRG00000009189	PRDM10	100	91.128	ENSGGOG00000015359	PRDM10	100	91.731	Gorilla_gorilla
ENSTTRG00000009189	PRDM10	100	88.605	ENSHGLG00000001106	PRDM10	100	89.371	Heterocephalus_glaber_female
ENSTTRG00000009189	PRDM10	100	88.927	ENSHGLG00100002350	PRDM10	100	89.523	Heterocephalus_glaber_male
ENSTTRG00000009189	PRDM10	100	90.682	ENSSTOG00000002015	PRDM10	100	91.199	Ictidomys_tridecemlineatus
ENSTTRG00000009189	PRDM10	82	89.028	ENSJJAG00000021493	Prdm10	90	89.344	Jaculus_jaculus
ENSTTRG00000009189	PRDM10	100	87.360	ENSLAFG00000031867	PRDM10	100	88.306	Loxodonta_africana
ENSTTRG00000009189	PRDM10	100	91.278	ENSMFAG00000031008	PRDM10	100	91.883	Macaca_fascicularis
ENSTTRG00000009189	PRDM10	100	91.278	ENSMMUG00000017555	PRDM10	100	91.883	Macaca_mulatta
ENSTTRG00000009189	PRDM10	100	91.192	ENSMNEG00000036493	PRDM10	100	91.796	Macaca_nemestrina
ENSTTRG00000009189	PRDM10	94	85.882	ENSMLEG00000042028	PRDM10	100	87.451	Mandrillus_leucophaeus
ENSTTRG00000009189	PRDM10	100	80.000	ENSMGAG00000001112	PRDM10	100	80.669	Meleagris_gallopavo
ENSTTRG00000009189	PRDM10	100	91.451	ENSMICG00000013888	PRDM10	100	91.796	Microcebus_murinus
ENSTTRG00000009189	PRDM10	100	87.595	ENSMOCG00000021853	Prdm10	100	88.007	Microtus_ochrogaster
ENSTTRG00000009189	PRDM10	76	85.585	ENSMODG00000004979	PRDM10	99	86.281	Monodelphis_domestica
ENSTTRG00000009189	PRDM10	100	87.679	ENSMUSG00000042496	Prdm10	100	88.256	Mus_musculus
ENSTTRG00000009189	PRDM10	100	89.560	MGP_SPRETEiJ_G0033061	-	100	90.069	Mus_spretus
ENSTTRG00000009189	PRDM10	100	91.869	ENSMPUG00000008711	PRDM10	99	92.474	Mustela_putorius_furo
ENSTTRG00000009189	PRDM10	100	91.255	ENSMLUG00000013051	PRDM10	100	91.948	Myotis_lucifugus
ENSTTRG00000009189	PRDM10	100	90.052	ENSNGAG00000000580	Prdm10	100	90.657	Nannospalax_galili
ENSTTRG00000009189	PRDM10	100	91.192	ENSNLEG00000007488	PRDM10	100	91.796	Nomascus_leucogenys
ENSTTRG00000009189	PRDM10	100	87.458	ENSODEG00000005309	PRDM10	99	89.960	Octodon_degus
ENSTTRG00000009189	PRDM10	100	78.840	ENSOANG00000000577	-	100	78.072	Ornithorhynchus_anatinus
ENSTTRG00000009189	PRDM10	100	89.273	ENSOCUG00000003736	PRDM10	100	89.792	Oryctolagus_cuniculus
ENSTTRG00000009189	PRDM10	100	90.760	ENSOGAG00000010723	PRDM10	100	90.760	Otolemur_garnettii
ENSTTRG00000009189	PRDM10	100	94.194	ENSOARG00000014507	PRDM10	100	94.541	Ovis_aries
ENSTTRG00000009189	PRDM10	100	90.956	ENSPPAG00000042881	PRDM10	100	91.559	Pan_paniscus
ENSTTRG00000009189	PRDM10	100	92.215	ENSPPRG00000007002	PRDM10	100	92.907	Panthera_pardus
ENSTTRG00000009189	PRDM10	100	92.128	ENSPTIG00000013331	PRDM10	100	92.820	Panthera_tigris_altaica
ENSTTRG00000009189	PRDM10	100	91.128	ENSPTRG00000004477	PRDM10	100	91.731	Pan_troglodytes
ENSTTRG00000009189	PRDM10	100	91.105	ENSPANG00000017470	PRDM10	100	91.710	Papio_anubis
ENSTTRG00000009189	PRDM10	100	88.041	ENSPEMG00000014985	Prdm10	100	88.210	Peromyscus_maniculatus_bairdii
ENSTTRG00000009189	PRDM10	100	91.034	ENSPPYG00000004061	PRDM10	100	91.638	Pongo_abelii
ENSTTRG00000009189	PRDM10	92	82.073	ENSPCAG00000014514	PRDM10	100	82.353	Procavia_capensis
ENSTTRG00000009189	PRDM10	100	76.632	ENSPCOG00000023406	PRDM10	100	78.208	Propithecus_coquereli
ENSTTRG00000009189	PRDM10	100	92.647	ENSPVAG00000012764	PRDM10	100	93.339	Pteropus_vampyrus
ENSTTRG00000009189	PRDM10	100	89.378	ENSRNOG00000007853	Prdm10	100	90.155	Rattus_norvegicus
ENSTTRG00000009189	PRDM10	100	90.862	ENSRBIG00000030924	PRDM10	100	91.466	Rhinopithecus_bieti
ENSTTRG00000009189	PRDM10	100	90.862	ENSRROG00000034334	PRDM10	100	91.466	Rhinopithecus_roxellana
ENSTTRG00000009189	PRDM10	100	90.431	ENSSBOG00000008773	PRDM10	100	91.034	Saimiri_boliviensis_boliviensis
ENSTTRG00000009189	PRDM10	99	84.755	ENSSHAG00000004503	PRDM10	99	85.542	Sarcophilus_harrisii
ENSTTRG00000009189	PRDM10	67	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSTTRG00000009189	PRDM10	100	79.296	ENSSPUG00000001178	PRDM10	97	83.708	Sphenodon_punctatus
ENSTTRG00000009189	PRDM10	100	94.047	ENSSSCG00000015243	PRDM10	100	94.047	Sus_scrofa
ENSTTRG00000009189	PRDM10	100	81.568	ENSTGUG00000000530	PRDM10	100	81.826	Taeniopygia_guttata
ENSTTRG00000009189	PRDM10	100	80.138	ENSTBEG00000007221	PRDM10	100	80.743	Tupaia_belangeri
ENSTTRG00000009189	PRDM10	92	89.889	ENSUAMG00000018832	PRDM10	94	93.006	Ursus_americanus
ENSTTRG00000009189	PRDM10	100	89.316	ENSUMAG00000003167	PRDM10	99	92.635	Ursus_maritimus
ENSTTRG00000009189	PRDM10	100	91.436	ENSVVUG00000019878	PRDM10	100	92.128	Vulpes_vulpes
ENSTTRG00000009189	PRDM10	100	67.807	ENSXETG00000032173	PRDM10	100	67.446	Xenopus_tropicalis