EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000009887 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 5588 bases
Position: chrGeneScaffold_3270:496948-502535
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000009377	EXOSC1	PF10447.9	2.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000009888	EXOSC1-201	555	-	ENSTTRP00000009377	184 (aa)	-	UPI00018B8AA7

Gene Model

Click here to download ENSTTRG00000009887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000009887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000009887	EXOSC1	100	97.283	ENSG00000171311	EXOSC1	94	97.283	Homo_sapiens
ENSTTRG00000009887	EXOSC1	99	81.967	ENSAPOG00000007822	exosc1	94	81.967	Acanthochromis_polyacanthus
ENSTTRG00000009887	EXOSC1	100	99.457	ENSAMEG00000000129	EXOSC1	94	99.457	Ailuropoda_melanoleuca
ENSTTRG00000009887	EXOSC1	99	81.421	ENSACIG00000018956	exosc1	90	81.421	Amphilophus_citrinellus
ENSTTRG00000009887	EXOSC1	99	81.967	ENSAOCG00000010699	exosc1	94	81.967	Amphiprion_ocellaris
ENSTTRG00000009887	EXOSC1	97	71.508	ENSAPEG00000012690	exosc1	96	71.508	Amphiprion_percula
ENSTTRG00000009887	EXOSC1	99	81.421	ENSATEG00000018683	exosc1	94	81.421	Anabas_testudineus
ENSTTRG00000009887	EXOSC1	100	87.500	ENSACAG00000002101	EXOSC1	94	87.500	Anolis_carolinensis
ENSTTRG00000009887	EXOSC1	100	98.913	ENSANAG00000034669	EXOSC1	94	98.913	Aotus_nancymaae
ENSTTRG00000009887	EXOSC1	99	81.967	ENSACLG00000021243	exosc1	94	81.967	Astatotilapia_calliptera
ENSTTRG00000009887	EXOSC1	99	83.607	ENSAMXG00000011116	exosc1	94	83.607	Astyanax_mexicanus
ENSTTRG00000009887	EXOSC1	100	98.913	ENSBTAG00000012699	EXOSC1	94	98.913	Bos_taurus
ENSTTRG00000009887	EXOSC1	90	34.483	WBGene00012966	exos-1	84	34.483	Caenorhabditis_elegans
ENSTTRG00000009887	EXOSC1	100	98.370	ENSCJAG00000016586	EXOSC1	94	98.370	Callithrix_jacchus
ENSTTRG00000009887	EXOSC1	100	98.913	ENSCAFG00000009068	EXOSC1	89	98.913	Canis_familiaris
ENSTTRG00000009887	EXOSC1	100	98.913	ENSCAFG00020006002	EXOSC1	89	98.913	Canis_lupus_dingo
ENSTTRG00000009887	EXOSC1	100	98.913	ENSCHIG00000015253	EXOSC1	94	98.913	Capra_hircus
ENSTTRG00000009887	EXOSC1	100	97.283	ENSTSYG00000000760	EXOSC1	94	97.283	Carlito_syrichta
ENSTTRG00000009887	EXOSC1	100	98.370	ENSCPOG00000001173	EXOSC1	94	98.370	Cavia_porcellus
ENSTTRG00000009887	EXOSC1	100	54.301	ENSCCAG00000023986	EXOSC1	93	54.301	Cebus_capucinus
ENSTTRG00000009887	EXOSC1	100	97.283	ENSCATG00000034114	EXOSC1	94	97.283	Cercocebus_atys
ENSTTRG00000009887	EXOSC1	100	98.370	ENSCLAG00000002463	EXOSC1	94	98.370	Chinchilla_lanigera
ENSTTRG00000009887	EXOSC1	100	96.739	ENSCSAG00000005870	EXOSC1	94	96.739	Chlorocebus_sabaeus
ENSTTRG00000009887	EXOSC1	96	83.523	ENSCHOG00000006477	EXOSC1	94	83.523	Choloepus_hoffmanni
ENSTTRG00000009887	EXOSC1	57	80.952	ENSCPBG00000011949	EXOSC1	87	80.952	Chrysemys_picta_bellii
ENSTTRG00000009887	EXOSC1	99	55.738	ENSCING00000022734	-	88	55.738	Ciona_intestinalis
ENSTTRG00000009887	EXOSC1	99	57.377	ENSCSAVG00000010865	-	93	57.377	Ciona_savignyi
ENSTTRG00000009887	EXOSC1	100	97.283	ENSCANG00000034159	EXOSC1	94	97.283	Colobus_angolensis_palliatus
ENSTTRG00000009887	EXOSC1	100	96.739	ENSCGRG00001000335	Exosc1	94	96.739	Cricetulus_griseus_chok1gshd
ENSTTRG00000009887	EXOSC1	100	96.739	ENSCGRG00000011602	Exosc1	94	96.739	Cricetulus_griseus_crigri
ENSTTRG00000009887	EXOSC1	99	68.852	ENSCSEG00000007895	exosc1	90	68.852	Cynoglossus_semilaevis
ENSTTRG00000009887	EXOSC1	99	77.596	ENSCVAG00000016748	exosc1	94	77.596	Cyprinodon_variegatus
ENSTTRG00000009887	EXOSC1	99	82.514	ENSDARG00000059841	exosc1	94	82.514	Danio_rerio
ENSTTRG00000009887	EXOSC1	74	98.529	ENSDNOG00000007983	EXOSC1	92	98.529	Dasypus_novemcinctus
ENSTTRG00000009887	EXOSC1	100	97.283	ENSDORG00000016528	Exosc1	94	97.283	Dipodomys_ordii
ENSTTRG00000009887	EXOSC1	98	47.568	FBgn0032346	Csl4	90	47.568	Drosophila_melanogaster
ENSTTRG00000009887	EXOSC1	100	96.739	ENSETEG00000002469	-	94	96.739	Echinops_telfairi
ENSTTRG00000009887	EXOSC1	100	63.636	ENSEBUG00000008164	exosc1	94	63.636	Eptatretus_burgeri
ENSTTRG00000009887	EXOSC1	100	88.043	ENSEASG00005008684	EXOSC1	94	88.043	Equus_asinus_asinus
ENSTTRG00000009887	EXOSC1	59	76.852	ENSECAG00000010621	EXOSC1	64	76.852	Equus_caballus
ENSTTRG00000009887	EXOSC1	100	97.283	ENSEEUG00000005647	EXOSC1	94	97.283	Erinaceus_europaeus
ENSTTRG00000009887	EXOSC1	99	81.319	ENSELUG00000017369	exosc1	81	81.319	Esox_lucius
ENSTTRG00000009887	EXOSC1	100	99.457	ENSFCAG00000040563	EXOSC1	89	99.457	Felis_catus
ENSTTRG00000009887	EXOSC1	100	83.152	ENSFALG00000008450	EXOSC1	94	83.152	Ficedula_albicollis
ENSTTRG00000009887	EXOSC1	100	98.913	ENSFDAG00000000846	EXOSC1	94	98.913	Fukomys_damarensis
ENSTTRG00000009887	EXOSC1	99	77.596	ENSFHEG00000009154	exosc1	94	77.596	Fundulus_heteroclitus
ENSTTRG00000009887	EXOSC1	99	81.967	ENSGMOG00000008993	exosc1	94	81.967	Gadus_morhua
ENSTTRG00000009887	EXOSC1	100	72.283	ENSGALG00000039917	EXOSC1	100	86.301	Gallus_gallus
ENSTTRG00000009887	EXOSC1	99	77.596	ENSGAFG00000010265	exosc1	90	77.596	Gambusia_affinis
ENSTTRG00000009887	EXOSC1	99	81.967	ENSGACG00000018936	exosc1	94	81.967	Gasterosteus_aculeatus
ENSTTRG00000009887	EXOSC1	100	84.783	ENSGAGG00000019192	EXOSC1	94	84.783	Gopherus_agassizii
ENSTTRG00000009887	EXOSC1	100	84.239	ENSGGOG00000003099	EXOSC1	94	84.239	Gorilla_gorilla
ENSTTRG00000009887	EXOSC1	99	81.967	ENSHBUG00000017857	exosc1	95	81.967	Haplochromis_burtoni
ENSTTRG00000009887	EXOSC1	100	98.370	ENSHGLG00000016927	EXOSC1	94	98.370	Heterocephalus_glaber_female
ENSTTRG00000009887	EXOSC1	100	98.370	ENSHGLG00100012208	EXOSC1	94	98.370	Heterocephalus_glaber_male
ENSTTRG00000009887	EXOSC1	99	80.874	ENSHCOG00000019882	exosc1	94	80.874	Hippocampus_comes
ENSTTRG00000009887	EXOSC1	99	82.514	ENSIPUG00000007685	exosc1	94	82.514	Ictalurus_punctatus
ENSTTRG00000009887	EXOSC1	100	98.370	ENSSTOG00000006615	EXOSC1	94	98.370	Ictidomys_tridecemlineatus
ENSTTRG00000009887	EXOSC1	60	81.081	ENSSTOG00000029860	-	84	81.081	Ictidomys_tridecemlineatus
ENSTTRG00000009887	EXOSC1	100	98.370	ENSJJAG00000013311	Exosc1	94	98.370	Jaculus_jaculus
ENSTTRG00000009887	EXOSC1	100	79.891	ENSKMAG00000001202	exosc1	78	79.891	Kryptolebias_marmoratus
ENSTTRG00000009887	EXOSC1	99	81.421	ENSLBEG00000011448	exosc1	94	81.421	Labrus_bergylta
ENSTTRG00000009887	EXOSC1	100	58.947	ENSLOCG00000003776	exosc1	94	58.947	Lepisosteus_oculatus
ENSTTRG00000009887	EXOSC1	100	97.826	ENSLAFG00000015983	EXOSC1	94	97.826	Loxodonta_africana
ENSTTRG00000009887	EXOSC1	100	97.283	ENSMFAG00000001493	EXOSC1	94	97.283	Macaca_fascicularis
ENSTTRG00000009887	EXOSC1	100	97.283	ENSMMUG00000020028	EXOSC1	87	97.283	Macaca_mulatta
ENSTTRG00000009887	EXOSC1	100	97.283	ENSMNEG00000029816	EXOSC1	94	97.283	Macaca_nemestrina
ENSTTRG00000009887	EXOSC1	100	91.304	ENSMLEG00000027643	EXOSC1	94	91.304	Mandrillus_leucophaeus
ENSTTRG00000009887	EXOSC1	99	82.514	ENSMAMG00000012200	exosc1	94	82.514	Mastacembelus_armatus
ENSTTRG00000009887	EXOSC1	99	81.967	ENSMZEG00005007042	exosc1	94	81.967	Maylandia_zebra
ENSTTRG00000009887	EXOSC1	100	84.239	ENSMAUG00000020462	-	94	84.239	Mesocricetus_auratus
ENSTTRG00000009887	EXOSC1	100	97.826	ENSMICG00000007664	EXOSC1	87	97.826	Microcebus_murinus
ENSTTRG00000009887	EXOSC1	100	92.391	ENSMOCG00000017124	-	94	92.391	Microtus_ochrogaster
ENSTTRG00000009887	EXOSC1	100	96.739	ENSMOCG00000006004	-	94	96.739	Microtus_ochrogaster
ENSTTRG00000009887	EXOSC1	99	62.088	ENSMMOG00000021403	exosc1	94	62.088	Mola_mola
ENSTTRG00000009887	EXOSC1	100	93.514	ENSMODG00000004213	EXOSC1	94	93.514	Monodelphis_domestica
ENSTTRG00000009887	EXOSC1	99	81.421	ENSMALG00000007061	exosc1	92	81.421	Monopterus_albus
ENSTTRG00000009887	EXOSC1	100	96.196	MGP_CAROLIEiJ_G0022959	Exosc1	94	96.196	Mus_caroli
ENSTTRG00000009887	EXOSC1	100	96.196	ENSMUSG00000034321	Exosc1	94	96.196	Mus_musculus
ENSTTRG00000009887	EXOSC1	100	96.739	MGP_PahariEiJ_G0014449	Exosc1	94	96.739	Mus_pahari
ENSTTRG00000009887	EXOSC1	100	96.196	MGP_SPRETEiJ_G0023880	Exosc1	94	96.196	Mus_spretus
ENSTTRG00000009887	EXOSC1	100	99.457	ENSMPUG00000017044	EXOSC1	94	99.457	Mustela_putorius_furo
ENSTTRG00000009887	EXOSC1	100	97.826	ENSMLUG00000009228	EXOSC1	94	97.826	Myotis_lucifugus
ENSTTRG00000009887	EXOSC1	100	95.652	ENSNGAG00000022033	Exosc1	94	95.652	Nannospalax_galili
ENSTTRG00000009887	EXOSC1	99	61.749	ENSNBRG00000024007	exosc1	92	61.749	Neolamprologus_brichardi
ENSTTRG00000009887	EXOSC1	100	96.739	ENSNLEG00000013872	EXOSC1	94	96.739	Nomascus_leucogenys
ENSTTRG00000009887	EXOSC1	57	91.346	ENSMEUG00000002246	EXOSC1	90	91.346	Notamacropus_eugenii
ENSTTRG00000009887	EXOSC1	100	96.196	ENSOPRG00000005065	EXOSC1	94	96.196	Ochotona_princeps
ENSTTRG00000009887	EXOSC1	100	98.370	ENSODEG00000016709	EXOSC1	94	98.370	Octodon_degus
ENSTTRG00000009887	EXOSC1	99	81.967	ENSONIG00000017683	exosc1	94	81.967	Oreochromis_niloticus
ENSTTRG00000009887	EXOSC1	63	93.913	ENSOANG00000006563	EXOSC1	98	91.935	Ornithorhynchus_anatinus
ENSTTRG00000009887	EXOSC1	100	96.757	ENSOCUG00000011898	-	94	96.757	Oryctolagus_cuniculus
ENSTTRG00000009887	EXOSC1	100	91.304	ENSOCUG00000026461	-	94	91.304	Oryctolagus_cuniculus
ENSTTRG00000009887	EXOSC1	99	79.891	ENSORLG00000011595	exosc1	94	79.891	Oryzias_latipes
ENSTTRG00000009887	EXOSC1	99	79.891	ENSORLG00020005831	exosc1	94	79.891	Oryzias_latipes_hni
ENSTTRG00000009887	EXOSC1	99	79.891	ENSORLG00015004317	exosc1	94	79.891	Oryzias_latipes_hsok
ENSTTRG00000009887	EXOSC1	99	63.934	ENSOMEG00000013907	exosc1	93	63.934	Oryzias_melastigma
ENSTTRG00000009887	EXOSC1	100	97.283	ENSOGAG00000016259	EXOSC1	94	97.283	Otolemur_garnettii
ENSTTRG00000009887	EXOSC1	100	98.370	ENSOARG00000010136	EXOSC1	94	98.370	Ovis_aries
ENSTTRG00000009887	EXOSC1	100	90.860	ENSPPAG00000039842	EXOSC1	94	90.860	Pan_paniscus
ENSTTRG00000009887	EXOSC1	100	99.457	ENSPPRG00000023366	EXOSC1	94	99.457	Panthera_pardus
ENSTTRG00000009887	EXOSC1	100	99.457	ENSPTIG00000017701	EXOSC1	94	99.457	Panthera_tigris_altaica
ENSTTRG00000009887	EXOSC1	100	97.283	ENSPTRG00000002808	EXOSC1	94	97.283	Pan_troglodytes
ENSTTRG00000009887	EXOSC1	100	97.283	ENSPANG00000021324	EXOSC1	94	97.283	Papio_anubis
ENSTTRG00000009887	EXOSC1	99	83.060	ENSPKIG00000016037	exosc1	94	83.060	Paramormyrops_kingsleyae
ENSTTRG00000009887	EXOSC1	79	81.507	ENSPSIG00000013571	EXOSC1	98	81.148	Pelodiscus_sinensis
ENSTTRG00000009887	EXOSC1	99	69.399	ENSPMGG00000014002	exosc1	93	69.399	Periophthalmus_magnuspinnatus
ENSTTRG00000009887	EXOSC1	100	96.739	ENSPEMG00000010710	-	94	96.739	Peromyscus_maniculatus_bairdii
ENSTTRG00000009887	EXOSC1	100	70.811	ENSPMAG00000000195	exosc1	94	70.811	Petromyzon_marinus
ENSTTRG00000009887	EXOSC1	100	94.022	ENSPCIG00000002210	EXOSC1	93	94.022	Phascolarctos_cinereus
ENSTTRG00000009887	EXOSC1	100	76.630	ENSPFOG00000006755	exosc1	90	76.630	Poecilia_formosa
ENSTTRG00000009887	EXOSC1	99	77.049	ENSPLAG00000005880	exosc1	94	77.049	Poecilia_latipinna
ENSTTRG00000009887	EXOSC1	100	76.630	ENSPMEG00000015598	exosc1	90	76.630	Poecilia_mexicana
ENSTTRG00000009887	EXOSC1	100	66.304	ENSPREG00000000405	exosc1	89	66.304	Poecilia_reticulata
ENSTTRG00000009887	EXOSC1	100	96.739	ENSPPYG00000002531	EXOSC1	94	96.739	Pongo_abelii
ENSTTRG00000009887	EXOSC1	100	97.283	ENSPCAG00000009135	EXOSC1	94	97.283	Procavia_capensis
ENSTTRG00000009887	EXOSC1	100	91.304	ENSPCOG00000027539	EXOSC1	94	91.304	Propithecus_coquereli
ENSTTRG00000009887	EXOSC1	100	98.370	ENSPVAG00000003372	EXOSC1	94	98.370	Pteropus_vampyrus
ENSTTRG00000009887	EXOSC1	99	81.967	ENSPNYG00000021745	exosc1	94	81.967	Pundamilia_nyererei
ENSTTRG00000009887	EXOSC1	99	82.514	ENSPNAG00000001944	exosc1	94	82.514	Pygocentrus_nattereri
ENSTTRG00000009887	EXOSC1	100	96.739	ENSRNOG00000048708	Exosc1	94	96.739	Rattus_norvegicus
ENSTTRG00000009887	EXOSC1	100	97.283	ENSRBIG00000035618	EXOSC1	94	97.283	Rhinopithecus_bieti
ENSTTRG00000009887	EXOSC1	100	97.283	ENSRROG00000032589	EXOSC1	87	97.283	Rhinopithecus_roxellana
ENSTTRG00000009887	EXOSC1	100	98.913	ENSSBOG00000000359	EXOSC1	94	98.913	Saimiri_boliviensis_boliviensis
ENSTTRG00000009887	EXOSC1	79	95.918	ENSSHAG00000018219	EXOSC1	100	95.918	Sarcophilus_harrisii
ENSTTRG00000009887	EXOSC1	100	84.239	ENSSFOG00015009069	exosc1	95	84.239	Scleropages_formosus
ENSTTRG00000009887	EXOSC1	99	79.781	ENSSFOG00015016289	-	94	79.781	Scleropages_formosus
ENSTTRG00000009887	EXOSC1	99	82.514	ENSSMAG00000003721	exosc1	94	82.514	Scophthalmus_maximus
ENSTTRG00000009887	EXOSC1	99	82.514	ENSSDUG00000002993	exosc1	94	82.514	Seriola_dumerili
ENSTTRG00000009887	EXOSC1	99	82.514	ENSSLDG00000025181	exosc1	94	82.514	Seriola_lalandi_dorsalis
ENSTTRG00000009887	EXOSC1	100	83.696	ENSSARG00000000162	EXOSC1	94	83.696	Sorex_araneus
ENSTTRG00000009887	EXOSC1	99	83.607	ENSSPUG00000012263	EXOSC1	94	83.607	Sphenodon_punctatus
ENSTTRG00000009887	EXOSC1	99	73.224	ENSSPAG00000016792	exosc1	78	73.224	Stegastes_partitus
ENSTTRG00000009887	EXOSC1	100	98.370	ENSSSCG00000010518	EXOSC1	86	98.370	Sus_scrofa
ENSTTRG00000009887	EXOSC1	100	83.152	ENSTGUG00000009692	EXOSC1	95	83.152	Taeniopygia_guttata
ENSTTRG00000009887	EXOSC1	99	74.863	ENSTRUG00000007706	exosc1	95	74.863	Takifugu_rubripes
ENSTTRG00000009887	EXOSC1	99	75.269	ENSTNIG00000014079	exosc1	94	75.269	Tetraodon_nigroviridis
ENSTTRG00000009887	EXOSC1	100	89.130	ENSTBEG00000006011	EXOSC1	94	89.130	Tupaia_belangeri
ENSTTRG00000009887	EXOSC1	100	82.065	ENSUAMG00000010266	EXOSC1	94	82.065	Ursus_americanus
ENSTTRG00000009887	EXOSC1	100	82.065	ENSUMAG00000022002	EXOSC1	94	82.065	Ursus_maritimus
ENSTTRG00000009887	EXOSC1	100	98.913	ENSVVUG00000023192	EXOSC1	60	98.913	Vulpes_vulpes
ENSTTRG00000009887	EXOSC1	100	79.348	ENSXETG00000003434	exosc1	95	79.348	Xenopus_tropicalis
ENSTTRG00000009887	EXOSC1	65	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSTTRG00000009887	EXOSC1	100	66.848	ENSXMAG00000023382	exosc1	89	66.848	Xiphophorus_maculatus