EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000010167 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 1729 bases
Position: chrGeneScaffold_2229:23321-25049
Accession: 14173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000009641	PseudoU_synth_2	PF00849.22	7.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000010165	RPUSD1-201	939	-	ENSTTRP00000009641	312 (aa)	-	UPI00018B551E

Gene Model

Click here to download ENSTTRG00000010167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000010167's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000010167	RPUSD1	99	86.495	ENSG00000007376	RPUSD1	100	89.881	Homo_sapiens
ENSTTRG00000010167	RPUSD1	98	58.117	ENSAPOG00000022221	rpusd1	98	57.792	Acanthochromis_polyacanthus
ENSTTRG00000010167	RPUSD1	100	83.974	ENSAMEG00000007461	RPUSD1	100	83.974	Ailuropoda_melanoleuca
ENSTTRG00000010167	RPUSD1	98	59.477	ENSACIG00000015863	rpusd1	98	59.416	Amphilophus_citrinellus
ENSTTRG00000010167	RPUSD1	98	57.377	ENSAOCG00000021975	rpusd1	95	57.377	Amphiprion_ocellaris
ENSTTRG00000010167	RPUSD1	98	57.705	ENSAPEG00000001316	rpusd1	95	57.705	Amphiprion_percula
ENSTTRG00000010167	RPUSD1	77	69.038	ENSATEG00000002984	rpusd1	98	58.710	Anabas_testudineus
ENSTTRG00000010167	RPUSD1	79	62.500	ENSAPLG00000012316	RPUSD1	100	62.500	Anas_platyrhynchos
ENSTTRG00000010167	RPUSD1	99	67.419	ENSACAG00000008953	RPUSD1	100	66.242	Anolis_carolinensis
ENSTTRG00000010167	RPUSD1	99	86.174	ENSANAG00000024709	RPUSD1	99	86.174	Aotus_nancymaae
ENSTTRG00000010167	RPUSD1	98	54.328	ENSACLG00000013692	rpusd1	98	59.283	Astatotilapia_calliptera
ENSTTRG00000010167	RPUSD1	99	60.194	ENSAMXG00000019802	rpusd1	100	59.554	Astyanax_mexicanus
ENSTTRG00000010167	RPUSD1	100	91.987	ENSBTAG00000000179	RPUSD1	100	92.949	Bos_taurus
ENSTTRG00000010167	RPUSD1	99	86.174	ENSCJAG00000012253	RPUSD1	99	86.174	Callithrix_jacchus
ENSTTRG00000010167	RPUSD1	99	85.852	ENSCAFG00000019614	RPUSD1	99	86.174	Canis_familiaris
ENSTTRG00000010167	RPUSD1	99	85.852	ENSCAFG00020008891	RPUSD1	99	86.174	Canis_lupus_dingo
ENSTTRG00000010167	RPUSD1	100	91.346	ENSCHIG00000012872	RPUSD1	100	92.308	Capra_hircus
ENSTTRG00000010167	RPUSD1	99	82.315	ENSTSYG00000036934	RPUSD1	99	80.892	Carlito_syrichta
ENSTTRG00000010167	RPUSD1	100	84.936	ENSCAPG00000014219	RPUSD1	100	84.936	Cavia_aperea
ENSTTRG00000010167	RPUSD1	100	84.936	ENSCPOG00000034604	RPUSD1	100	84.936	Cavia_porcellus
ENSTTRG00000010167	RPUSD1	99	86.817	ENSCCAG00000034385	RPUSD1	99	86.817	Cebus_capucinus
ENSTTRG00000010167	RPUSD1	99	87.460	ENSCATG00000042983	RPUSD1	99	87.460	Cercocebus_atys
ENSTTRG00000010167	RPUSD1	100	83.333	ENSCLAG00000013966	RPUSD1	100	84.936	Chinchilla_lanigera
ENSTTRG00000010167	RPUSD1	99	87.460	ENSCSAG00000012121	RPUSD1	99	87.460	Chlorocebus_sabaeus
ENSTTRG00000010167	RPUSD1	99	65.584	ENSCPBG00000021101	RPUSD1	99	65.909	Chrysemys_picta_bellii
ENSTTRG00000010167	RPUSD1	90	87.900	ENSCANG00000028576	RPUSD1	97	88.278	Colobus_angolensis_palliatus
ENSTTRG00000010167	RPUSD1	100	83.333	ENSCGRG00001014253	Rpusd1	100	80.769	Cricetulus_griseus_chok1gshd
ENSTTRG00000010167	RPUSD1	100	83.333	ENSCGRG00000017995	Rpusd1	100	80.769	Cricetulus_griseus_crigri
ENSTTRG00000010167	RPUSD1	99	57.051	ENSCSEG00000018512	rpusd1	100	57.051	Cynoglossus_semilaevis
ENSTTRG00000010167	RPUSD1	98	58.632	ENSCVAG00000022746	rpusd1	98	58.632	Cyprinodon_variegatus
ENSTTRG00000010167	RPUSD1	99	61.812	ENSDARG00000060192	rpusd1	100	61.859	Danio_rerio
ENSTTRG00000010167	RPUSD1	100	84.295	ENSDNOG00000003721	RPUSD1	100	84.295	Dasypus_novemcinctus
ENSTTRG00000010167	RPUSD1	100	83.974	ENSDORG00000026656	Rpusd1	100	84.295	Dipodomys_ordii
ENSTTRG00000010167	RPUSD1	99	45.399	ENSEBUG00000008767	rpusd1	94	45.706	Eptatretus_burgeri
ENSTTRG00000010167	RPUSD1	99	87.619	ENSEASG00005018421	RPUSD1	75	89.206	Equus_asinus_asinus
ENSTTRG00000010167	RPUSD1	81	61.417	ENSELUG00000014307	rpusd1	88	54.984	Esox_lucius
ENSTTRG00000010167	RPUSD1	100	84.295	ENSFCAG00000010359	RPUSD1	100	83.974	Felis_catus
ENSTTRG00000010167	RPUSD1	99	66.667	ENSFALG00000003211	RPUSD1	100	65.696	Ficedula_albicollis
ENSTTRG00000010167	RPUSD1	100	84.936	ENSFDAG00000013398	RPUSD1	100	84.936	Fukomys_damarensis
ENSTTRG00000010167	RPUSD1	98	56.393	ENSFHEG00000004736	rpusd1	98	57.843	Fundulus_heteroclitus
ENSTTRG00000010167	RPUSD1	98	56.393	ENSGMOG00000010756	rpusd1	98	56.352	Gadus_morhua
ENSTTRG00000010167	RPUSD1	99	67.314	ENSGALG00000005315	RPUSD1	100	67.314	Gallus_gallus
ENSTTRG00000010167	RPUSD1	98	58.497	ENSGAFG00000009886	rpusd1	98	58.361	Gambusia_affinis
ENSTTRG00000010167	RPUSD1	80	65.737	ENSGACG00000014276	rpusd1	97	57.756	Gasterosteus_aculeatus
ENSTTRG00000010167	RPUSD1	99	66.019	ENSGAGG00000004181	RPUSD1	99	65.909	Gopherus_agassizii
ENSTTRG00000010167	RPUSD1	99	86.817	ENSGGOG00000013997	RPUSD1	99	86.817	Gorilla_gorilla
ENSTTRG00000010167	RPUSD1	81	67.194	ENSHBUG00000023728	rpusd1	98	58.958	Haplochromis_burtoni
ENSTTRG00000010167	RPUSD1	100	82.692	ENSHGLG00000002595	RPUSD1	100	84.295	Heterocephalus_glaber_female
ENSTTRG00000010167	RPUSD1	100	82.692	ENSHGLG00100014303	RPUSD1	100	84.295	Heterocephalus_glaber_male
ENSTTRG00000010167	RPUSD1	98	57.843	ENSHCOG00000002390	rpusd1	99	57.843	Hippocampus_comes
ENSTTRG00000010167	RPUSD1	99	62.903	ENSIPUG00000001570	rpusd1	99	62.903	Ictalurus_punctatus
ENSTTRG00000010167	RPUSD1	100	87.179	ENSSTOG00000004276	RPUSD1	100	87.179	Ictidomys_tridecemlineatus
ENSTTRG00000010167	RPUSD1	100	85.256	ENSJJAG00000015696	Rpusd1	100	86.218	Jaculus_jaculus
ENSTTRG00000010167	RPUSD1	98	57.377	ENSKMAG00000017287	rpusd1	98	57.516	Kryptolebias_marmoratus
ENSTTRG00000010167	RPUSD1	98	57.705	ENSLBEG00000013354	RPUSD1	98	57.705	Labrus_bergylta
ENSTTRG00000010167	RPUSD1	98	57.705	ENSLBEG00000022502	rpusd1	98	57.705	Labrus_bergylta
ENSTTRG00000010167	RPUSD1	99	62.460	ENSLACG00000008869	RPUSD1	99	62.662	Latimeria_chalumnae
ENSTTRG00000010167	RPUSD1	69	74.074	ENSLOCG00000005682	rpusd1	99	74.074	Lepisosteus_oculatus
ENSTTRG00000010167	RPUSD1	100	80.449	ENSLAFG00000002115	RPUSD1	99	80.707	Loxodonta_africana
ENSTTRG00000010167	RPUSD1	99	87.781	ENSMFAG00000003961	RPUSD1	99	87.781	Macaca_fascicularis
ENSTTRG00000010167	RPUSD1	99	87.781	ENSMMUG00000000842	RPUSD1	99	87.781	Macaca_mulatta
ENSTTRG00000010167	RPUSD1	99	87.781	ENSMNEG00000042712	RPUSD1	99	87.781	Macaca_nemestrina
ENSTTRG00000010167	RPUSD1	99	87.781	ENSMLEG00000030591	RPUSD1	99	87.781	Mandrillus_leucophaeus
ENSTTRG00000010167	RPUSD1	81	66.798	ENSMAMG00000004735	rpusd1	98	59.283	Mastacembelus_armatus
ENSTTRG00000010167	RPUSD1	81	67.589	ENSMZEG00005003214	rpusd1	98	59.283	Maylandia_zebra
ENSTTRG00000010167	RPUSD1	97	66.556	ENSMGAG00000005447	RPUSD1	99	66.556	Meleagris_gallopavo
ENSTTRG00000010167	RPUSD1	84	77.068	ENSMAUG00000019998	Rpusd1	100	77.068	Mesocricetus_auratus
ENSTTRG00000010167	RPUSD1	100	87.179	ENSMICG00000017561	RPUSD1	100	87.179	Microcebus_murinus
ENSTTRG00000010167	RPUSD1	100	83.974	ENSMOCG00000014082	Rpusd1	100	84.936	Microtus_ochrogaster
ENSTTRG00000010167	RPUSD1	79	66.122	ENSMMOG00000012569	rpusd1	99	56.863	Mola_mola
ENSTTRG00000010167	RPUSD1	100	68.671	ENSMODG00000016882	RPUSD1	100	68.354	Monodelphis_domestica
ENSTTRG00000010167	RPUSD1	98	59.416	ENSMALG00000017818	rpusd1	98	59.416	Monopterus_albus
ENSTTRG00000010167	RPUSD1	100	83.974	MGP_CAROLIEiJ_G0021244	Rpusd1	100	84.936	Mus_caroli
ENSTTRG00000010167	RPUSD1	100	84.295	ENSMUSG00000041199	Rpusd1	100	85.256	Mus_musculus
ENSTTRG00000010167	RPUSD1	100	81.847	MGP_PahariEiJ_G0023562	Rpusd1	99	84.244	Mus_pahari
ENSTTRG00000010167	RPUSD1	100	84.295	MGP_SPRETEiJ_G0022155	Rpusd1	100	85.256	Mus_spretus
ENSTTRG00000010167	RPUSD1	100	83.333	ENSMPUG00000015897	RPUSD1	100	83.654	Mustela_putorius_furo
ENSTTRG00000010167	RPUSD1	100	89.423	ENSMLUG00000001089	RPUSD1	100	89.423	Myotis_lucifugus
ENSTTRG00000010167	RPUSD1	100	84.615	ENSNGAG00000003595	Rpusd1	100	85.577	Nannospalax_galili
ENSTTRG00000010167	RPUSD1	79	67.339	ENSNBRG00000006457	rpusd1	98	58.974	Neolamprologus_brichardi
ENSTTRG00000010167	RPUSD1	56	82.759	ENSNLEG00000008424	-	99	82.759	Nomascus_leucogenys
ENSTTRG00000010167	RPUSD1	100	70.513	ENSMEUG00000016049	RPUSD1	100	69.551	Notamacropus_eugenii
ENSTTRG00000010167	RPUSD1	99	74.516	ENSOPRG00000008340	RPUSD1	99	74.194	Ochotona_princeps
ENSTTRG00000010167	RPUSD1	100	83.013	ENSODEG00000016945	RPUSD1	100	83.013	Octodon_degus
ENSTTRG00000010167	RPUSD1	81	66.403	ENSONIG00000015672	rpusd1	99	58.306	Oreochromis_niloticus
ENSTTRG00000010167	RPUSD1	99	58.442	ENSORLG00000013009	rpusd1	99	58.442	Oryzias_latipes
ENSTTRG00000010167	RPUSD1	99	58.117	ENSORLG00020010382	rpusd1	99	58.117	Oryzias_latipes_hni
ENSTTRG00000010167	RPUSD1	99	57.468	ENSORLG00015021354	rpusd1	99	57.468	Oryzias_latipes_hsok
ENSTTRG00000010167	RPUSD1	98	56.604	ENSOMEG00000021426	rpusd1	98	58.361	Oryzias_melastigma
ENSTTRG00000010167	RPUSD1	100	87.500	ENSOGAG00000003795	RPUSD1	100	87.500	Otolemur_garnettii
ENSTTRG00000010167	RPUSD1	100	91.026	ENSOARG00000014254	RPUSD1	100	91.987	Ovis_aries
ENSTTRG00000010167	RPUSD1	99	86.817	ENSPPAG00000034797	RPUSD1	99	86.817	Pan_paniscus
ENSTTRG00000010167	RPUSD1	100	83.974	ENSPPRG00000012389	RPUSD1	100	83.175	Panthera_pardus
ENSTTRG00000010167	RPUSD1	100	83.654	ENSPTIG00000008545	RPUSD1	92	82.857	Panthera_tigris_altaica
ENSTTRG00000010167	RPUSD1	99	86.817	ENSPTRG00000007565	RPUSD1	99	86.817	Pan_troglodytes
ENSTTRG00000010167	RPUSD1	99	87.138	ENSPANG00000024401	RPUSD1	99	87.138	Papio_anubis
ENSTTRG00000010167	RPUSD1	99	60.897	ENSPKIG00000018890	rpusd1	91	60.645	Paramormyrops_kingsleyae
ENSTTRG00000010167	RPUSD1	99	67.638	ENSPSIG00000013945	RPUSD1	100	67.638	Pelodiscus_sinensis
ENSTTRG00000010167	RPUSD1	98	57.980	ENSPMGG00000014950	rpusd1	99	57.468	Periophthalmus_magnuspinnatus
ENSTTRG00000010167	RPUSD1	100	82.051	ENSPEMG00000000497	Rpusd1	100	83.974	Peromyscus_maniculatus_bairdii
ENSTTRG00000010167	RPUSD1	82	59.073	ENSPMAG00000001563	rpusd1	99	52.273	Petromyzon_marinus
ENSTTRG00000010167	RPUSD1	100	69.968	ENSPCIG00000021216	-	94	69.551	Phascolarctos_cinereus
ENSTTRG00000010167	RPUSD1	98	60.000	ENSPFOG00000007946	rpusd1	98	59.344	Poecilia_formosa
ENSTTRG00000010167	RPUSD1	98	60.000	ENSPLAG00000011925	rpusd1	98	60.000	Poecilia_latipinna
ENSTTRG00000010167	RPUSD1	98	59.344	ENSPMEG00000002910	rpusd1	98	58.689	Poecilia_mexicana
ENSTTRG00000010167	RPUSD1	98	59.150	ENSPREG00000019851	rpusd1	98	58.689	Poecilia_reticulata
ENSTTRG00000010167	RPUSD1	99	67.846	ENSPCAG00000002258	RPUSD1	99	67.846	Procavia_capensis
ENSTTRG00000010167	RPUSD1	100	87.179	ENSPCOG00000022582	RPUSD1	100	87.179	Propithecus_coquereli
ENSTTRG00000010167	RPUSD1	100	87.500	ENSPVAG00000013104	RPUSD1	100	87.500	Pteropus_vampyrus
ENSTTRG00000010167	RPUSD1	81	67.194	ENSPNYG00000024076	rpusd1	98	58.958	Pundamilia_nyererei
ENSTTRG00000010167	RPUSD1	98	59.804	ENSPNAG00000013806	rpusd1	100	58.576	Pygocentrus_nattereri
ENSTTRG00000010167	RPUSD1	100	83.654	ENSRNOG00000023639	Rpusd1	100	84.615	Rattus_norvegicus
ENSTTRG00000010167	RPUSD1	99	87.138	ENSRBIG00000030238	RPUSD1	99	87.138	Rhinopithecus_bieti
ENSTTRG00000010167	RPUSD1	99	87.138	ENSRROG00000036663	RPUSD1	99	87.138	Rhinopithecus_roxellana
ENSTTRG00000010167	RPUSD1	99	82.637	ENSSBOG00000033063	RPUSD1	99	82.958	Saimiri_boliviensis_boliviensis
ENSTTRG00000010167	RPUSD1	100	68.690	ENSSHAG00000013500	RPUSD1	100	68.269	Sarcophilus_harrisii
ENSTTRG00000010167	RPUSD1	99	61.812	ENSSFOG00015014394	rpusd1	99	61.812	Scleropages_formosus
ENSTTRG00000010167	RPUSD1	98	57.377	ENSSMAG00000008045	rpusd1	91	57.377	Scophthalmus_maximus
ENSTTRG00000010167	RPUSD1	81	67.589	ENSSDUG00000001829	rpusd1	95	59.935	Seriola_dumerili
ENSTTRG00000010167	RPUSD1	81	67.589	ENSSLDG00000020853	rpusd1	95	59.935	Seriola_lalandi_dorsalis
ENSTTRG00000010167	RPUSD1	54	87.425	ENSSARG00000011187	-	100	87.425	Sorex_araneus
ENSTTRG00000010167	RPUSD1	63	56.061	ENSSPUG00000005119	-	100	55.556	Sphenodon_punctatus
ENSTTRG00000010167	RPUSD1	98	58.689	ENSSPAG00000012708	rpusd1	98	58.689	Stegastes_partitus
ENSTTRG00000010167	RPUSD1	100	91.987	ENSSSCG00000008000	RPUSD1	99	92.996	Sus_scrofa
ENSTTRG00000010167	RPUSD1	82	73.725	ENSTGUG00000015375	RPUSD1	100	73.725	Taeniopygia_guttata
ENSTTRG00000010167	RPUSD1	98	57.929	ENSTRUG00000003041	rpusd1	98	57.929	Takifugu_rubripes
ENSTTRG00000010167	RPUSD1	98	54.902	ENSTNIG00000002660	rpusd1	99	54.902	Tetraodon_nigroviridis
ENSTTRG00000010167	RPUSD1	100	83.654	ENSUAMG00000012736	RPUSD1	100	83.974	Ursus_americanus
ENSTTRG00000010167	RPUSD1	100	83.654	ENSUMAG00000021174	RPUSD1	100	83.974	Ursus_maritimus
ENSTTRG00000010167	RPUSD1	99	84.566	ENSVVUG00000012357	RPUSD1	99	84.566	Vulpes_vulpes
ENSTTRG00000010167	RPUSD1	100	61.218	ENSXETG00000007184	rpusd1	100	60.897	Xenopus_tropicalis
ENSTTRG00000010167	RPUSD1	98	58.170	ENSXCOG00000017930	rpusd1	98	57.377	Xiphophorus_couchianus
ENSTTRG00000010167	RPUSD1	98	58.824	ENSXMAG00000024084	rpusd1	98	58.361	Xiphophorus_maculatus