EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000010295 (Gene tree)
Gene ID: -
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 19888 bases
Position: chrGeneScaffold_2225:293488-313375
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000009773	ResIII	PF04851.15	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000010299	CHD3-201	5892	-	ENSTTRP00000009773	1963 (aa)	-	UPI00018B82AF

Gene Model

Click here to download ENSTTRG00000010295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000010295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000010295	CHD3	92	70.927	ENSTTRG00000010468	CHD5	96	70.865
ENSTTRG00000010295	CHD3	82	79.487	ENSTTRG00000016102	-	97	68.496

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000010295	CHD3	97	99.383	ENSG00000170004	CHD3	97	99.383	Homo_sapiens
ENSTTRG00000010295	CHD3	74	84.548	ENSAPOG00000005614	chd3	91	84.548	Acanthochromis_polyacanthus
ENSTTRG00000010295	CHD3	69	97.507	ENSAMEG00000003025	-	100	97.507	Ailuropoda_melanoleuca
ENSTTRG00000010295	CHD3	79	82.438	ENSACIG00000019671	chd3	98	82.268	Amphilophus_citrinellus
ENSTTRG00000010295	CHD3	77	84.460	ENSAOCG00000023784	chd3	95	84.460	Amphiprion_ocellaris
ENSTTRG00000010295	CHD3	73	82.821	ENSAPEG00000006341	chd3	93	76.966	Amphiprion_percula
ENSTTRG00000010295	CHD3	95	75.774	ENSATEG00000000848	chd3	93	81.579	Anabas_testudineus
ENSTTRG00000010295	CHD3	95	86.667	ENSACAG00000004276	CHD3	94	86.415	Anolis_carolinensis
ENSTTRG00000010295	CHD3	97	96.451	ENSANAG00000034323	CHD3	99	99.468	Aotus_nancymaae
ENSTTRG00000010295	CHD3	88	81.675	ENSACLG00000009222	chd3	99	76.040	Astatotilapia_calliptera
ENSTTRG00000010295	CHD3	97	98.923	ENSBTAG00000014377	CHD3	96	98.961	Bos_taurus
ENSTTRG00000010295	CHD3	97	99.383	ENSCJAG00000014766	CHD3	97	99.383	Callithrix_jacchus
ENSTTRG00000010295	CHD3	97	98.669	ENSCAFG00000016859	CHD3	97	98.669	Canis_familiaris
ENSTTRG00000010295	CHD3	92	98.669	ENSCAFG00020007422	CHD3	99	98.669	Canis_lupus_dingo
ENSTTRG00000010295	CHD3	97	99.049	ENSCHIG00000016737	CHD3	98	99.049	Capra_hircus
ENSTTRG00000010295	CHD3	97	98.479	ENSTSYG00000035658	CHD3	99	99.468	Carlito_syrichta
ENSTTRG00000010295	CHD3	97	97.222	ENSCAPG00000014864	CHD3	97	97.222	Cavia_aperea
ENSTTRG00000010295	CHD3	97	97.972	ENSCPOG00000022653	CHD3	97	97.972	Cavia_porcellus
ENSTTRG00000010295	CHD3	97	99.383	ENSCCAG00000034792	CHD3	97	99.383	Cebus_capucinus
ENSTTRG00000010295	CHD3	97	99.383	ENSCATG00000041717	CHD3	97	99.383	Cercocebus_atys
ENSTTRG00000010295	CHD3	97	98.765	ENSCLAG00000010523	CHD3	99	98.765	Chinchilla_lanigera
ENSTTRG00000010295	CHD3	97	98.542	ENSCSAG00000011122	CHD3	99	98.542	Chlorocebus_sabaeus
ENSTTRG00000010295	CHD3	87	84.605	ENSCPBG00000011966	CHD3	94	92.598	Chrysemys_picta_bellii
ENSTTRG00000010295	CHD3	97	99.383	ENSCANG00000037641	CHD3	99	100.000	Colobus_angolensis_palliatus
ENSTTRG00000010295	CHD3	97	97.592	ENSCGRG00001011306	Chd3	99	97.592	Cricetulus_griseus_chok1gshd
ENSTTRG00000010295	CHD3	91	97.794	ENSCGRG00000007878	Chd3	97	97.794	Cricetulus_griseus_crigri
ENSTTRG00000010295	CHD3	89	76.021	ENSCSEG00000004489	chd3	99	80.000	Cynoglossus_semilaevis
ENSTTRG00000010295	CHD3	84	82.072	ENSCVAG00000007293	chd3	92	83.201	Cyprinodon_variegatus
ENSTTRG00000010295	CHD3	86	83.707	ENSDARG00000021405	chd3	98	78.332	Danio_rerio
ENSTTRG00000010295	CHD3	96	97.690	ENSDNOG00000047846	CHD3	94	97.690	Dasypus_novemcinctus
ENSTTRG00000010295	CHD3	97	97.845	ENSDORG00000010713	Chd3	99	97.845	Dipodomys_ordii
ENSTTRG00000010295	CHD3	95	92.653	ENSETEG00000017733	CHD3	98	92.653	Echinops_telfairi
ENSTTRG00000010295	CHD3	54	77.575	ENSEBUG00000008310	chd3	99	70.224	Eptatretus_burgeri
ENSTTRG00000010295	CHD3	90	99.474	ENSEASG00005019360	CHD3	99	99.474	Equus_asinus_asinus
ENSTTRG00000010295	CHD3	90	99.474	ENSECAG00000010051	CHD3	99	99.474	Equus_caballus
ENSTTRG00000010295	CHD3	89	98.305	ENSEEUG00000015205	CHD3	91	100.000	Erinaceus_europaeus
ENSTTRG00000010295	CHD3	75	89.796	ENSELUG00000019499	chd3	95	89.796	Esox_lucius
ENSTTRG00000010295	CHD3	97	98.606	ENSFCAG00000009629	CHD3	95	98.606	Felis_catus
ENSTTRG00000010295	CHD3	97	98.416	ENSFDAG00000008220	CHD3	97	98.416	Fukomys_damarensis
ENSTTRG00000010295	CHD3	85	80.102	ENSGMOG00000013599	chd3	89	80.711	Gadus_morhua
ENSTTRG00000010295	CHD3	56	81.576	ENSGAFG00000004055	chd3	97	81.576	Gambusia_affinis
ENSTTRG00000010295	CHD3	95	75.140	ENSGACG00000019275	chd3	96	76.422	Gasterosteus_aculeatus
ENSTTRG00000010295	CHD3	73	86.105	ENSGAGG00000013164	CHD3	95	89.748	Gopherus_agassizii
ENSTTRG00000010295	CHD3	97	99.074	ENSGGOG00000013496	CHD3	99	99.468	Gorilla_gorilla
ENSTTRG00000010295	CHD3	97	98.352	ENSHGLG00000012017	CHD3	98	98.352	Heterocephalus_glaber_female
ENSTTRG00000010295	CHD3	86	92.790	ENSHGLG00100013902	CHD3	98	93.182	Heterocephalus_glaber_male
ENSTTRG00000010295	CHD3	91	75.856	ENSHCOG00000010170	chd3	93	77.128	Hippocampus_comes
ENSTTRG00000010295	CHD3	78	84.948	ENSIPUG00000003271	chd3	92	84.830	Ictalurus_punctatus
ENSTTRG00000010295	CHD3	97	99.383	ENSSTOG00000025907	CHD3	99	99.383	Ictidomys_tridecemlineatus
ENSTTRG00000010295	CHD3	97	97.529	ENSJJAG00000017633	Chd3	99	97.529	Jaculus_jaculus
ENSTTRG00000010295	CHD3	80	89.573	ENSKMAG00000019292	chd3	96	75.788	Kryptolebias_marmoratus
ENSTTRG00000010295	CHD3	91	71.401	ENSLBEG00000028485	chd3	85	87.391	Labrus_bergylta
ENSTTRG00000010295	CHD3	94	75.607	ENSLACG00000008031	CHD3	96	74.908	Latimeria_chalumnae
ENSTTRG00000010295	CHD3	93	78.716	ENSLOCG00000013965	chd3	95	79.131	Lepisosteus_oculatus
ENSTTRG00000010295	CHD3	88	98.195	ENSLAFG00000000572	CHD3	95	98.195	Loxodonta_africana
ENSTTRG00000010295	CHD3	97	99.383	ENSMFAG00000020113	CHD3	99	100.000	Macaca_fascicularis
ENSTTRG00000010295	CHD3	97	99.383	ENSMMUG00000022221	CHD3	98	99.383	Macaca_mulatta
ENSTTRG00000010295	CHD3	97	99.383	ENSMNEG00000001728	CHD3	99	100.000	Macaca_nemestrina
ENSTTRG00000010295	CHD3	97	99.383	ENSMLEG00000032249	CHD3	97	99.383	Mandrillus_leucophaeus
ENSTTRG00000010295	CHD3	83	76.876	ENSMAMG00000000564	chd3	98	76.797	Mastacembelus_armatus
ENSTTRG00000010295	CHD3	97	97.402	ENSMAUG00000013873	Chd3	98	94.494	Mesocricetus_auratus
ENSTTRG00000010295	CHD3	97	99.074	ENSMICG00000008741	CHD3	95	99.074	Microcebus_murinus
ENSTTRG00000010295	CHD3	96	97.465	ENSMOCG00000004848	Chd3	99	97.465	Microtus_ochrogaster
ENSTTRG00000010295	CHD3	92	77.655	ENSMMOG00000012699	chd3	98	77.720	Mola_mola
ENSTTRG00000010295	CHD3	90	92.844	ENSMODG00000007509	CHD3	98	92.780	Monodelphis_domestica
ENSTTRG00000010295	CHD3	97	97.215	MGP_CAROLIEiJ_G0016564	Chd3	99	95.899	Mus_caroli
ENSTTRG00000010295	CHD3	97	97.468	ENSMUSG00000018474	Chd3	99	95.709	Mus_musculus
ENSTTRG00000010295	CHD3	97	97.532	MGP_PahariEiJ_G0017695	Chd3	99	95.774	Mus_pahari
ENSTTRG00000010295	CHD3	97	97.342	MGP_SPRETEiJ_G0017400	Chd3	99	95.899	Mus_spretus
ENSTTRG00000010295	CHD3	84	98.733	ENSMPUG00000008861	CHD3	99	98.733	Mustela_putorius_furo
ENSTTRG00000010295	CHD3	97	98.101	ENSMLUG00000014643	-	97	98.101	Myotis_lucifugus
ENSTTRG00000010295	CHD3	97	97.592	ENSNGAG00000000773	Chd3	97	97.592	Nannospalax_galili
ENSTTRG00000010295	CHD3	81	78.700	ENSNBRG00000000636	chd3	98	77.952	Neolamprologus_brichardi
ENSTTRG00000010295	CHD3	95	99.383	ENSNLEG00000009770	CHD3	98	99.361	Nomascus_leucogenys
ENSTTRG00000010295	CHD3	82	93.380	ENSMEUG00000005852	CHD3	86	90.934	Notamacropus_eugenii
ENSTTRG00000010295	CHD3	92	97.817	ENSOPRG00000011069	CHD3	99	97.817	Ochotona_princeps
ENSTTRG00000010295	CHD3	97	98.035	ENSODEG00000017785	CHD3	98	98.035	Octodon_degus
ENSTTRG00000010295	CHD3	73	82.860	ENSONIG00000009292	chd3	96	79.030	Oreochromis_niloticus
ENSTTRG00000010295	CHD3	96	95.860	ENSOCUG00000029299	CHD3	96	95.710	Oryctolagus_cuniculus
ENSTTRG00000010295	CHD3	77	73.541	ENSORLG00000007107	chd3	91	74.590	Oryzias_latipes
ENSTTRG00000010295	CHD3	67	84.017	ENSOMEG00000013691	chd3	97	78.434	Oryzias_melastigma
ENSTTRG00000010295	CHD3	97	98.099	ENSOGAG00000003216	CHD3	99	98.099	Otolemur_garnettii
ENSTTRG00000010295	CHD3	97	98.292	ENSOARG00000017855	CHD3	98	98.292	Ovis_aries
ENSTTRG00000010295	CHD3	97	99.383	ENSPPAG00000032886	CHD3	99	100.000	Pan_paniscus
ENSTTRG00000010295	CHD3	97	98.733	ENSPPRG00000000626	CHD3	97	98.733	Panthera_pardus
ENSTTRG00000010295	CHD3	97	99.383	ENSPTRG00000008714	CHD3	99	100.000	Pan_troglodytes
ENSTTRG00000010295	CHD3	97	99.383	ENSPANG00000023938	CHD3	99	100.000	Papio_anubis
ENSTTRG00000010295	CHD3	95	77.059	ENSPKIG00000006305	chd3	98	78.870	Paramormyrops_kingsleyae
ENSTTRG00000010295	CHD3	52	93.817	ENSPSIG00000010177	CHD3	94	93.817	Pelodiscus_sinensis
ENSTTRG00000010295	CHD3	97	97.275	ENSPEMG00000014262	Chd3	98	97.275	Peromyscus_maniculatus_bairdii
ENSTTRG00000010295	CHD3	97	93.097	ENSPCIG00000005442	CHD3	96	97.447	Phascolarctos_cinereus
ENSTTRG00000010295	CHD3	93	75.858	ENSPFOG00000012464	chd3	89	77.188	Poecilia_formosa
ENSTTRG00000010295	CHD3	82	82.996	ENSPLAG00000002887	chd3	90	80.691	Poecilia_latipinna
ENSTTRG00000010295	CHD3	84	84.105	ENSPREG00000011044	chd3	98	82.921	Poecilia_reticulata
ENSTTRG00000010295	CHD3	95	95.501	ENSPPYG00000007940	CHD3	98	95.501	Pongo_abelii
ENSTTRG00000010295	CHD3	93	98.630	ENSPCAG00000004350	CHD3	95	98.630	Procavia_capensis
ENSTTRG00000010295	CHD3	97	98.765	ENSPCOG00000020952	CHD3	98	98.765	Propithecus_coquereli
ENSTTRG00000010295	CHD3	83	98.790	ENSPVAG00000016344	CHD3	86	98.790	Pteropus_vampyrus
ENSTTRG00000010295	CHD3	86	83.291	ENSPNAG00000020393	chd3	95	84.731	Pygocentrus_nattereri
ENSTTRG00000010295	CHD3	90	97.342	ENSRNOG00000009722	Chd3	99	97.342	Rattus_norvegicus
ENSTTRG00000010295	CHD3	97	96.565	ENSRBIG00000033562	CHD3	98	96.565	Rhinopithecus_bieti
ENSTTRG00000010295	CHD3	97	99.383	ENSRROG00000029554	CHD3	99	100.000	Rhinopithecus_roxellana
ENSTTRG00000010295	CHD3	97	99.383	ENSSBOG00000020719	CHD3	99	100.000	Saimiri_boliviensis_boliviensis
ENSTTRG00000010295	CHD3	96	92.844	ENSSHAG00000014412	CHD3	98	92.780	Sarcophilus_harrisii
ENSTTRG00000010295	CHD3	87	74.389	ENSSFOG00015023123	chd3	96	74.676	Scleropages_formosus
ENSTTRG00000010295	CHD3	78	90.741	ENSSMAG00000006451	chd3	97	76.891	Scophthalmus_maximus
ENSTTRG00000010295	CHD3	77	82.513	ENSSPAG00000013694	chd3	96	82.425	Stegastes_partitus
ENSTTRG00000010295	CHD3	97	98.607	ENSSSCG00000021363	CHD3	99	98.607	Sus_scrofa
ENSTTRG00000010295	CHD3	72	81.395	ENSTRUG00000014990	chd3	85	82.842	Takifugu_rubripes
ENSTTRG00000010295	CHD3	94	75.896	ENSTNIG00000012998	chd3	96	77.070	Tetraodon_nigroviridis
ENSTTRG00000010295	CHD3	60	100.000	ENSTBEG00000011454	-	67	100.000	Tupaia_belangeri
ENSTTRG00000010295	CHD3	90	97.660	ENSUAMG00000005475	CHD3	99	97.660	Ursus_americanus
ENSTTRG00000010295	CHD3	50	100.000	ENSVPAG00000010794	-	59	100.000	Vicugna_pacos
ENSTTRG00000010295	CHD3	93	98.530	ENSVVUG00000028011	CHD3	98	98.669	Vulpes_vulpes
ENSTTRG00000010295	CHD3	95	75.826	ENSXETG00000012991	chd3	95	75.576	Xenopus_tropicalis
ENSTTRG00000010295	CHD3	73	85.549	ENSXMAG00000016035	chd3	97	85.549	Xiphophorus_maculatus