EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000010828 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 44165 bases
Position: chrGeneScaffold_319:7463-51627
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000010270	Ago_hook	PF10427.9	1.6e-22	1	1
ENSTTRP00000010270	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000010829	TNRC6C-201	5208	-	ENSTTRP00000010270	1736 (aa)	-	UPI00018B62A7

Gene Model

Click here to download ENSTTRG00000010828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000010828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000010828	TNRC6C	91	47.831	ENSTTRG00000002008	TNRC6A	81	46.791
ENSTTRG00000010828	TNRC6C	89	42.190	ENSTTRG00000011465	TNRC6B	75	42.656

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000010828	TNRC6C	97	91.425	ENSG00000078687	TNRC6C	100	93.684	Homo_sapiens
ENSTTRG00000010828	TNRC6C	77	54.943	ENSAPOG00000019749	tnrc6c1	97	50.134	Acanthochromis_polyacanthus
ENSTTRG00000010828	TNRC6C	99	88.245	ENSAMEG00000013756	TNRC6C	99	88.468	Ailuropoda_melanoleuca
ENSTTRG00000010828	TNRC6C	99	47.239	ENSACIG00000008075	tnrc6c1	96	51.997	Amphilophus_citrinellus
ENSTTRG00000010828	TNRC6C	75	68.581	ENSAOCG00000023968	tnrc6c1	97	49.946	Amphiprion_ocellaris
ENSTTRG00000010828	TNRC6C	77	54.545	ENSAPEG00000009020	tnrc6c1	97	50.458	Amphiprion_percula
ENSTTRG00000010828	TNRC6C	99	83.639	ENSAPLG00000005456	TNRC6C	93	83.695	Anas_platyrhynchos
ENSTTRG00000010828	TNRC6C	99	84.831	ENSACAG00000016198	TNRC6C	91	84.888	Anolis_carolinensis
ENSTTRG00000010828	TNRC6C	97	90.302	ENSANAG00000021554	TNRC6C	100	90.597	Aotus_nancymaae
ENSTTRG00000010828	TNRC6C	99	47.852	ENSACLG00000000424	tnrc6c1	97	51.501	Astatotilapia_calliptera
ENSTTRG00000010828	TNRC6C	97	92.836	ENSBTAG00000018658	TNRC6C	100	92.836	Bos_taurus
ENSTTRG00000010828	TNRC6C	97	90.656	ENSCJAG00000019431	TNRC6C	100	90.597	Callithrix_jacchus
ENSTTRG00000010828	TNRC6C	99	90.152	ENSCAFG00000005224	TNRC6C	92	90.152	Canis_familiaris
ENSTTRG00000010828	TNRC6C	99	91.867	ENSCAFG00020006661	TNRC6C	100	91.237	Canis_lupus_dingo
ENSTTRG00000010828	TNRC6C	99	91.484	ENSCHIG00000026004	TNRC6C	100	90.695	Capra_hircus
ENSTTRG00000010828	TNRC6C	97	89.647	ENSTSYG00000005403	TNRC6C	100	89.647	Carlito_syrichta
ENSTTRG00000010828	TNRC6C	99	82.629	ENSCAPG00000007307	TNRC6C	92	82.895	Cavia_aperea
ENSTTRG00000010828	TNRC6C	99	87.816	ENSCPOG00000000467	TNRC6C	100	88.448	Cavia_porcellus
ENSTTRG00000010828	TNRC6C	97	91.130	ENSCCAG00000030524	TNRC6C	100	91.070	Cebus_capucinus
ENSTTRG00000010828	TNRC6C	97	90.952	ENSCATG00000033135	TNRC6C	100	90.893	Cercocebus_atys
ENSTTRG00000010828	TNRC6C	99	90.230	ENSCLAG00000011139	TNRC6C	92	90.345	Chinchilla_lanigera
ENSTTRG00000010828	TNRC6C	99	88.758	ENSCSAG00000005167	TNRC6C	92	88.758	Chlorocebus_sabaeus
ENSTTRG00000010828	TNRC6C	76	90.256	ENSCHOG00000000088	TNRC6C	75	90.968	Choloepus_hoffmanni
ENSTTRG00000010828	TNRC6C	99	86.912	ENSCPBG00000027960	TNRC6C	100	87.116	Chrysemys_picta_bellii
ENSTTRG00000010828	TNRC6C	97	90.656	ENSCANG00000041771	TNRC6C	100	90.597	Colobus_angolensis_palliatus
ENSTTRG00000010828	TNRC6C	99	88.107	ENSCGRG00001022686	Tnrc6c	100	87.463	Cricetulus_griseus_chok1gshd
ENSTTRG00000010828	TNRC6C	99	88.512	ENSCGRG00000018041	Tnrc6c	100	87.463	Cricetulus_griseus_crigri
ENSTTRG00000010828	TNRC6C	94	53.088	ENSCSEG00000012744	tnrc6c1	93	48.624	Cynoglossus_semilaevis
ENSTTRG00000010828	TNRC6C	99	53.446	ENSDARG00000076847	tnrc6c1	96	54.475	Danio_rerio
ENSTTRG00000010828	TNRC6C	99	88.315	ENSDNOG00000003247	TNRC6C	94	88.539	Dasypus_novemcinctus
ENSTTRG00000010828	TNRC6C	99	85.134	ENSDORG00000004558	Tnrc6c	100	85.580	Dipodomys_ordii
ENSTTRG00000010828	TNRC6C	90	82.594	ENSETEG00000005527	TNRC6C	90	82.855	Echinops_telfairi
ENSTTRG00000010828	TNRC6C	97	92.595	ENSEASG00005004799	TNRC6C	100	92.536	Equus_asinus_asinus
ENSTTRG00000010828	TNRC6C	99	92.348	ENSECAG00000012486	TNRC6C	92	92.348	Equus_caballus
ENSTTRG00000010828	TNRC6C	96	91.525	ENSEEUG00000010008	TNRC6C	96	91.525	Erinaceus_europaeus
ENSTTRG00000010828	TNRC6C	97	90.479	ENSFCAG00000028358	TNRC6C	100	90.479	Felis_catus
ENSTTRG00000010828	TNRC6C	97	82.890	ENSFALG00000000848	TNRC6C	100	83.059	Ficedula_albicollis
ENSTTRG00000010828	TNRC6C	99	89.885	ENSFDAG00000010368	TNRC6C	100	89.885	Fukomys_damarensis
ENSTTRG00000010828	TNRC6C	99	47.617	ENSFHEG00000002936	tnrc6c1	97	47.861	Fundulus_heteroclitus
ENSTTRG00000010828	TNRC6C	99	85.208	ENSGALG00000001725	TNRC6C	100	87.271	Gallus_gallus
ENSTTRG00000010828	TNRC6C	99	49.676	ENSGAFG00000019019	tnrc6c1	97	50.057	Gambusia_affinis
ENSTTRG00000010828	TNRC6C	93	53.352	ENSGACG00000012320	tnrc6c1	90	48.871	Gasterosteus_aculeatus
ENSTTRG00000010828	TNRC6C	99	86.747	ENSGAGG00000022043	TNRC6C	98	86.862	Gopherus_agassizii
ENSTTRG00000010828	TNRC6C	97	90.485	ENSGGOG00000011304	TNRC6C	100	90.366	Gorilla_gorilla
ENSTTRG00000010828	TNRC6C	99	47.946	ENSHBUG00000010846	tnrc6c1	97	51.970	Haplochromis_burtoni
ENSTTRG00000010828	TNRC6C	99	90.115	ENSHGLG00000004809	TNRC6C	92	90.057	Heterocephalus_glaber_female
ENSTTRG00000010828	TNRC6C	99	89.016	ENSHGLG00100012597	TNRC6C	92	89.416	Heterocephalus_glaber_male
ENSTTRG00000010828	TNRC6C	99	53.214	ENSIPUG00000000818	tnrc6c1	92	52.829	Ictalurus_punctatus
ENSTTRG00000010828	TNRC6C	99	88.698	ENSSTOG00000009101	TNRC6C	100	88.698	Ictidomys_tridecemlineatus
ENSTTRG00000010828	TNRC6C	99	86.907	ENSJJAG00000017055	Tnrc6c	91	86.507	Jaculus_jaculus
ENSTTRG00000010828	TNRC6C	99	47.978	ENSKMAG00000021023	tnrc6c1	97	50.978	Kryptolebias_marmoratus
ENSTTRG00000010828	TNRC6C	99	75.200	ENSLACG00000015283	TNRC6C	100	75.542	Latimeria_chalumnae
ENSTTRG00000010828	TNRC6C	99	57.753	ENSLOCG00000013377	tnrc6c1	92	58.199	Lepisosteus_oculatus
ENSTTRG00000010828	TNRC6C	99	90.378	ENSLAFG00000011122	TNRC6C	99	84.448	Loxodonta_africana
ENSTTRG00000010828	TNRC6C	97	91.070	ENSMFAG00000043943	TNRC6C	100	91.011	Macaca_fascicularis
ENSTTRG00000010828	TNRC6C	97	91.070	ENSMMUG00000011924	TNRC6C	100	91.011	Macaca_mulatta
ENSTTRG00000010828	TNRC6C	97	91.011	ENSMNEG00000030405	TNRC6C	100	90.952	Macaca_nemestrina
ENSTTRG00000010828	TNRC6C	97	91.011	ENSMLEG00000033436	TNRC6C	100	90.952	Mandrillus_leucophaeus
ENSTTRG00000010828	TNRC6C	85	53.162	ENSMAMG00000023613	tnrc6c1	97	50.230	Mastacembelus_armatus
ENSTTRG00000010828	TNRC6C	99	47.905	ENSMZEG00005010920	tnrc6c1	97	51.501	Maylandia_zebra
ENSTTRG00000010828	TNRC6C	99	77.921	ENSMGAG00000003906	TNRC6C	93	77.865	Meleagris_gallopavo
ENSTTRG00000010828	TNRC6C	97	87.934	ENSMAUG00000021618	Tnrc6c	100	87.934	Mesocricetus_auratus
ENSTTRG00000010828	TNRC6C	97	91.721	ENSMICG00000003952	TNRC6C	100	91.603	Microcebus_murinus
ENSTTRG00000010828	TNRC6C	99	89.661	ENSMOCG00000015879	Tnrc6c	100	89.489	Microtus_ochrogaster
ENSTTRG00000010828	TNRC6C	76	56.142	ENSMMOG00000005203	tnrc6c1	97	51.195	Mola_mola
ENSTTRG00000010828	TNRC6C	99	85.429	ENSMODG00000001785	TNRC6C	92	85.200	Monodelphis_domestica
ENSTTRG00000010828	TNRC6C	99	89.431	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	89.259	Mus_caroli
ENSTTRG00000010828	TNRC6C	99	89.029	ENSMUSG00000025571	Tnrc6c	100	88.857	Mus_musculus
ENSTTRG00000010828	TNRC6C	99	89.316	MGP_PahariEiJ_G0018593	Tnrc6c	100	89.144	Mus_pahari
ENSTTRG00000010828	TNRC6C	99	89.087	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.914	Mus_spretus
ENSTTRG00000010828	TNRC6C	99	87.901	ENSMPUG00000013348	TNRC6C	91	87.788	Mustela_putorius_furo
ENSTTRG00000010828	TNRC6C	99	83.324	ENSMLUG00000014431	TNRC6C	91	83.324	Myotis_lucifugus
ENSTTRG00000010828	TNRC6C	99	88.558	ENSNGAG00000012203	Tnrc6c	92	88.558	Nannospalax_galili
ENSTTRG00000010828	TNRC6C	99	48.431	ENSNBRG00000005344	tnrc6c1	97	52.335	Neolamprologus_brichardi
ENSTTRG00000010828	TNRC6C	99	86.290	ENSNLEG00000000047	TNRC6C	92	86.122	Nomascus_leucogenys
ENSTTRG00000010828	TNRC6C	97	79.706	ENSMEUG00000005104	TNRC6C	100	79.647	Notamacropus_eugenii
ENSTTRG00000010828	TNRC6C	97	90.710	ENSODEG00000012499	TNRC6C	100	90.710	Octodon_degus
ENSTTRG00000010828	TNRC6C	91	51.672	ENSONIG00000002210	tnrc6c1	97	54.363	Oreochromis_niloticus
ENSTTRG00000010828	TNRC6C	99	80.851	ENSOANG00000009758	-	92	80.851	Ornithorhynchus_anatinus
ENSTTRG00000010828	TNRC6C	84	80.154	ENSOCUG00000006122	TNRC6C	86	79.755	Oryctolagus_cuniculus
ENSTTRG00000010828	TNRC6C	99	48.537	ENSORLG00000009837	tnrc6c1	100	68.773	Oryzias_latipes
ENSTTRG00000010828	TNRC6C	99	47.629	ENSORLG00020016510	tnrc6c1	100	48.605	Oryzias_latipes_hni
ENSTTRG00000010828	TNRC6C	81	43.365	ENSORLG00015000171	tnrc6c1	98	43.253	Oryzias_latipes_hsok
ENSTTRG00000010828	TNRC6C	99	48.725	ENSOMEG00000000357	tnrc6c1	97	48.841	Oryzias_melastigma
ENSTTRG00000010828	TNRC6C	97	87.796	ENSOGAG00000007197	TNRC6C	100	87.334	Otolemur_garnettii
ENSTTRG00000010828	TNRC6C	96	86.553	ENSOARG00000006041	TNRC6C	90	86.553	Ovis_aries
ENSTTRG00000010828	TNRC6C	97	91.189	ENSPPAG00000027160	TNRC6C	100	91.130	Pan_paniscus
ENSTTRG00000010828	TNRC6C	97	90.538	ENSPPRG00000018881	TNRC6C	100	90.538	Panthera_pardus
ENSTTRG00000010828	TNRC6C	90	86.022	ENSPTIG00000008791	TNRC6C	86	86.364	Panthera_tigris_altaica
ENSTTRG00000010828	TNRC6C	97	91.189	ENSPTRG00000009699	TNRC6C	100	91.130	Pan_troglodytes
ENSTTRG00000010828	TNRC6C	97	91.011	ENSPANG00000019994	TNRC6C	100	90.952	Papio_anubis
ENSTTRG00000010828	TNRC6C	93	52.704	ENSPKIG00000005428	tnrc6c1	98	52.092	Paramormyrops_kingsleyae
ENSTTRG00000010828	TNRC6C	99	85.287	ENSPSIG00000018069	TNRC6C	100	85.402	Pelodiscus_sinensis
ENSTTRG00000010828	TNRC6C	63	55.269	ENSPMGG00000022911	tnrc6c1	97	64.490	Periophthalmus_magnuspinnatus
ENSTTRG00000010828	TNRC6C	99	88.794	ENSPEMG00000009785	Tnrc6c	100	86.286	Peromyscus_maniculatus_bairdii
ENSTTRG00000010828	TNRC6C	56	83.316	ENSPCIG00000017421	-	99	83.316	Phascolarctos_cinereus
ENSTTRG00000010828	TNRC6C	99	49.650	ENSPFOG00000012560	tnrc6c1	97	54.735	Poecilia_formosa
ENSTTRG00000010828	TNRC6C	94	50.859	ENSPLAG00000021055	tnrc6c1	97	50.257	Poecilia_latipinna
ENSTTRG00000010828	TNRC6C	99	89.326	ENSPPYG00000008679	TNRC6C	91	89.326	Pongo_abelii
ENSTTRG00000010828	TNRC6C	93	93.365	ENSPCAG00000012510	TNRC6C	94	93.365	Procavia_capensis
ENSTTRG00000010828	TNRC6C	97	92.135	ENSPCOG00000021451	TNRC6C	100	92.076	Propithecus_coquereli
ENSTTRG00000010828	TNRC6C	96	95.000	ENSPVAG00000002008	TNRC6C	96	95.000	Pteropus_vampyrus
ENSTTRG00000010828	TNRC6C	99	47.522	ENSPNYG00000014477	tnrc6c1	97	51.997	Pundamilia_nyererei
ENSTTRG00000010828	TNRC6C	97	89.073	ENSRNOG00000022395	Tnrc6c	100	89.073	Rattus_norvegicus
ENSTTRG00000010828	TNRC6C	97	90.952	ENSRBIG00000027777	TNRC6C	100	90.893	Rhinopithecus_bieti
ENSTTRG00000010828	TNRC6C	97	91.011	ENSRROG00000042912	TNRC6C	100	90.952	Rhinopithecus_roxellana
ENSTTRG00000010828	TNRC6C	99	88.496	ENSSBOG00000023981	TNRC6C	100	88.555	Saimiri_boliviensis_boliviensis
ENSTTRG00000010828	TNRC6C	51	86.132	ENSSHAG00000018330	-	100	86.024	Sarcophilus_harrisii
ENSTTRG00000010828	TNRC6C	65	58.110	ENSSFOG00015004735	-	99	62.141	Scleropages_formosus
ENSTTRG00000010828	TNRC6C	76	59.165	ENSSFOG00015006475	tnrc6c1	94	53.449	Scleropages_formosus
ENSTTRG00000010828	TNRC6C	99	48.385	ENSSMAG00000012761	tnrc6c1	99	50.492	Scophthalmus_maximus
ENSTTRG00000010828	TNRC6C	99	50.083	ENSSDUG00000002366	tnrc6c1	96	51.019	Seriola_dumerili
ENSTTRG00000010828	TNRC6C	91	50.000	ENSSLDG00000025613	tnrc6c1	97	50.315	Seriola_lalandi_dorsalis
ENSTTRG00000010828	TNRC6C	91	94.118	ENSSARG00000006816	TNRC6C	91	94.118	Sorex_araneus
ENSTTRG00000010828	TNRC6C	80	83.010	ENSSPUG00000007341	TNRC6C	91	83.079	Sphenodon_punctatus
ENSTTRG00000010828	TNRC6C	76	53.983	ENSSPAG00000014977	tnrc6c1	96	49.109	Stegastes_partitus
ENSTTRG00000010828	TNRC6C	97	88.218	ENSSSCG00000034373	TNRC6C	100	89.739	Sus_scrofa
ENSTTRG00000010828	TNRC6C	99	87.011	ENSTGUG00000007733	TNRC6C	100	87.241	Taeniopygia_guttata
ENSTTRG00000010828	TNRC6C	93	53.819	ENSTRUG00000011685	tnrc6c1	100	48.864	Takifugu_rubripes
ENSTTRG00000010828	TNRC6C	94	54.702	ENSTNIG00000005273	tnrc6c1	100	59.766	Tetraodon_nigroviridis
ENSTTRG00000010828	TNRC6C	62	91.016	ENSTBEG00000005046	TNRC6C	95	91.016	Tupaia_belangeri
ENSTTRG00000010828	TNRC6C	99	89.931	ENSUMAG00000013614	TNRC6C	92	89.555	Ursus_maritimus
ENSTTRG00000010828	TNRC6C	50	85.975	ENSVPAG00000006765	-	99	86.009	Vicugna_pacos
ENSTTRG00000010828	TNRC6C	97	92.599	ENSVVUG00000015268	TNRC6C	100	92.540	Vulpes_vulpes
ENSTTRG00000010828	TNRC6C	97	74.662	ENSXETG00000019470	tnrc6c	100	74.603	Xenopus_tropicalis
ENSTTRG00000010828	TNRC6C	99	50.167	ENSXMAG00000025971	tnrc6c1	97	49.800	Xiphophorus_maculatus