EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000010963 (Gene tree)
Gene ID: -
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 34827 bases
Position: chrscaffold_110694:59509-94335
Accession: 19304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000010404	RRM_1	PF00076.22	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000010975	SCAF4-201	3366	-	ENSTTRP00000010404	1121 (aa)	-	UPI00018B5F0A

Gene Model

Click here to download ENSTTRG00000010963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000010963's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000010963	SCAF4	100	92.172	ENSG00000156304	SCAF4	99	92.524	Homo_sapiens
ENSTTRG00000010963	SCAF4	73	94.660	ENSAMEG00000014987	SCAF4	97	94.699	Ailuropoda_melanoleuca
ENSTTRG00000010963	SCAF4	100	75.859	ENSAPLG00000002509	SCAF4	59	83.826	Anas_platyrhynchos
ENSTTRG00000010963	SCAF4	100	63.980	ENSACAG00000002569	SCAF4	51	84.756	Anolis_carolinensis
ENSTTRG00000010963	SCAF4	100	91.652	ENSANAG00000037494	SCAF4	99	92.091	Aotus_nancymaae
ENSTTRG00000010963	SCAF4	100	92.851	ENSBTAG00000018855	SCAF4	99	93.380	Bos_taurus
ENSTTRG00000010963	SCAF4	100	91.659	ENSCJAG00000008993	SCAF4	99	94.660	Callithrix_jacchus
ENSTTRG00000010963	SCAF4	100	95.652	ENSCAFG00000008863	SCAF4	99	95.652	Canis_familiaris
ENSTTRG00000010963	SCAF4	99	93.054	ENSCAFG00020026019	SCAF4	100	95.120	Canis_lupus_dingo
ENSTTRG00000010963	SCAF4	100	92.335	ENSCHIG00000008385	SCAF4	99	92.599	Capra_hircus
ENSTTRG00000010963	SCAF4	92	93.736	ENSTSYG00000011344	SCAF4	98	93.735	Carlito_syrichta
ENSTTRG00000010963	SCAF4	100	88.401	ENSCPOG00000012443	SCAF4	99	88.664	Cavia_porcellus
ENSTTRG00000010963	SCAF4	100	92.159	ENSCCAG00000033727	SCAF4	99	92.511	Cebus_capucinus
ENSTTRG00000010963	SCAF4	100	91.681	ENSCATG00000030379	SCAF4	100	92.004	Cercocebus_atys
ENSTTRG00000010963	SCAF4	99	89.140	ENSCLAG00000006298	SCAF4	100	88.966	Chinchilla_lanigera
ENSTTRG00000010963	SCAF4	100	91.586	ENSCSAG00000009438	SCAF4	99	92.025	Chlorocebus_sabaeus
ENSTTRG00000010963	SCAF4	100	92.254	ENSCANG00000029847	SCAF4	99	92.606	Colobus_angolensis_palliatus
ENSTTRG00000010963	SCAF4	68	88.182	ENSCGRG00001020821	Scaf4	65	88.312	Cricetulus_griseus_chok1gshd
ENSTTRG00000010963	SCAF4	68	87.355	ENSCGRG00000014360	Scaf4	100	80.766	Cricetulus_griseus_crigri
ENSTTRG00000010963	SCAF4	79	51.290	ENSCSEG00000019549	scaf4a	52	54.574	Cynoglossus_semilaevis
ENSTTRG00000010963	SCAF4	79	53.536	ENSDARG00000077093	scaf4a	56	59.282	Danio_rerio
ENSTTRG00000010963	SCAF4	100	89.735	ENSDNOG00000019014	SCAF4	94	90.088	Dasypus_novemcinctus
ENSTTRG00000010963	SCAF4	96	79.670	ENSETEG00000000583	SCAF4	99	79.945	Echinops_telfairi
ENSTTRG00000010963	SCAF4	100	94.690	ENSEASG00005007756	SCAF4	99	94.867	Equus_asinus_asinus
ENSTTRG00000010963	SCAF4	100	96.117	ENSECAG00000014248	SCAF4	99	96.117	Equus_caballus
ENSTTRG00000010963	SCAF4	58	52.778	ENSELUG00000002779	SCAF8	67	68.841	Esox_lucius
ENSTTRG00000010963	SCAF4	100	93.827	ENSFCAG00000002228	SCAF4	99	94.709	Felis_catus
ENSTTRG00000010963	SCAF4	99	87.900	ENSFDAG00000017780	SCAF4	100	87.900	Fukomys_damarensis
ENSTTRG00000010963	SCAF4	100	77.269	ENSGALG00000033965	SCAF4	58	84.137	Gallus_gallus
ENSTTRG00000010963	SCAF4	90	90.363	ENSGGOG00000015557	SCAF4	99	93.653	Gorilla_gorilla
ENSTTRG00000010963	SCAF4	100	90.210	ENSHGLG00000010582	SCAF4	99	90.385	Heterocephalus_glaber_female
ENSTTRG00000010963	SCAF4	99	90.175	ENSHGLG00100009441	SCAF4	100	90.351	Heterocephalus_glaber_male
ENSTTRG00000010963	SCAF4	99	85.765	ENSSTOG00000004450	SCAF4	100	86.030	Ictidomys_tridecemlineatus
ENSTTRG00000010963	SCAF4	100	88.771	ENSJJAG00000019447	Scaf4	99	88.137	Jaculus_jaculus
ENSTTRG00000010963	SCAF4	97	61.004	ENSLACG00000013913	SCAF4	59	66.112	Latimeria_chalumnae
ENSTTRG00000010963	SCAF4	95	56.649	ENSLOCG00000009162	scaf4a	58	66.314	Lepisosteus_oculatus
ENSTTRG00000010963	SCAF4	100	91.914	ENSLAFG00000010710	SCAF4	99	92.308	Loxodonta_africana
ENSTTRG00000010963	SCAF4	100	91.616	ENSMFAG00000037668	SCAF4	99	91.616	Macaca_fascicularis
ENSTTRG00000010963	SCAF4	100	91.528	ENSMMUG00000001712	SCAF4	99	91.528	Macaca_mulatta
ENSTTRG00000010963	SCAF4	100	91.187	ENSMNEG00000032966	SCAF4	99	91.623	Macaca_nemestrina
ENSTTRG00000010963	SCAF4	100	91.689	ENSMLEG00000039674	SCAF4	100	92.038	Mandrillus_leucophaeus
ENSTTRG00000010963	SCAF4	100	76.740	ENSMGAG00000014515	SCAF4	59	84.137	Meleagris_gallopavo
ENSTTRG00000010963	SCAF4	99	88.032	ENSMAUG00000013307	Scaf4	100	87.855	Mesocricetus_auratus
ENSTTRG00000010963	SCAF4	100	92.933	ENSMICG00000005256	SCAF4	99	93.021	Microcebus_murinus
ENSTTRG00000010963	SCAF4	100	85.563	ENSMOCG00000012087	Scaf4	99	85.915	Microtus_ochrogaster
ENSTTRG00000010963	SCAF4	100	84.792	ENSMODG00000021040	SCAF4	99	84.085	Monodelphis_domestica
ENSTTRG00000010963	SCAF4	100	87.035	MGP_CAROLIEiJ_G0020944	Scaf4	94	86.856	Mus_caroli
ENSTTRG00000010963	SCAF4	100	87.097	ENSMUSG00000022983	Scaf4	94	87.565	Mus_musculus
ENSTTRG00000010963	SCAF4	98	86.813	MGP_PahariEiJ_G0016649	Scaf4	99	85.224	Mus_pahari
ENSTTRG00000010963	SCAF4	100	82.353	MGP_SPRETEiJ_G0021850	Scaf4	99	84.697	Mus_spretus
ENSTTRG00000010963	SCAF4	100	92.644	ENSMPUG00000001078	SCAF4	99	93.170	Mustela_putorius_furo
ENSTTRG00000010963	SCAF4	99	77.515	ENSMLUG00000011472	SCAF4	76	83.687	Myotis_lucifugus
ENSTTRG00000010963	SCAF4	100	88.801	ENSNGAG00000005214	Scaf4	99	89.903	Nannospalax_galili
ENSTTRG00000010963	SCAF4	100	92.084	ENSNLEG00000003569	SCAF4	99	92.524	Nomascus_leucogenys
ENSTTRG00000010963	SCAF4	84	90.683	ENSOPRG00000007016	SCAF4	75	90.683	Ochotona_princeps
ENSTTRG00000010963	SCAF4	100	88.332	ENSODEG00000002718	SCAF4	99	88.418	Octodon_degus
ENSTTRG00000010963	SCAF4	100	87.074	ENSOCUG00000008336	SCAF4	99	87.686	Oryctolagus_cuniculus
ENSTTRG00000010963	SCAF4	99	80.712	ENSOGAG00000014653	SCAF4	93	92.415	Otolemur_garnettii
ENSTTRG00000010963	SCAF4	99	91.718	ENSOARG00000013894	SCAF4	98	92.011	Ovis_aries
ENSTTRG00000010963	SCAF4	100	92.172	ENSPPAG00000028535	SCAF4	99	92.524	Pan_paniscus
ENSTTRG00000010963	SCAF4	100	94.081	ENSPPRG00000000635	SCAF4	100	94.700	Panthera_pardus
ENSTTRG00000010963	SCAF4	100	91.748	ENSPTIG00000021578	SCAF4	99	91.109	Panthera_tigris_altaica
ENSTTRG00000010963	SCAF4	100	92.172	ENSPTRG00000013848	SCAF4	99	92.524	Pan_troglodytes
ENSTTRG00000010963	SCAF4	100	91.266	ENSPANG00000017332	SCAF4	99	92.233	Papio_anubis
ENSTTRG00000010963	SCAF4	64	63.003	ENSPKIG00000022408	scaf4a	89	65.449	Paramormyrops_kingsleyae
ENSTTRG00000010963	SCAF4	100	76.876	ENSPSIG00000014242	SCAF4	57	84.448	Pelodiscus_sinensis
ENSTTRG00000010963	SCAF4	62	87.446	ENSPCIG00000028183	SCAF4	91	82.165	Phascolarctos_cinereus
ENSTTRG00000010963	SCAF4	53	57.312	ENSPREG00000013510	scaf4b	57	65.816	Poecilia_reticulata
ENSTTRG00000010963	SCAF4	100	92.355	ENSPPYG00000011355	SCAF4	100	92.681	Pongo_abelii
ENSTTRG00000010963	SCAF4	100	82.187	ENSPCAG00000009998	SCAF4	99	77.173	Procavia_capensis
ENSTTRG00000010963	SCAF4	100	92.281	ENSPCOG00000018710	SCAF4	99	92.193	Propithecus_coquereli
ENSTTRG00000010963	SCAF4	100	93.794	ENSPVAG00000005220	SCAF4	99	93.794	Pteropus_vampyrus
ENSTTRG00000010963	SCAF4	50	60.536	ENSPNYG00000010526	scaf4b	53	74.051	Pundamilia_nyererei
ENSTTRG00000010963	SCAF4	76	57.551	ENSPNAG00000016892	scaf4a	59	63.222	Pygocentrus_nattereri
ENSTTRG00000010963	SCAF4	98	86.538	ENSRNOG00000002104	Scaf4	94	84.960	Rattus_norvegicus
ENSTTRG00000010963	SCAF4	99	89.938	ENSRBIG00000040007	SCAF4	61	92.846	Rhinopithecus_bieti
ENSTTRG00000010963	SCAF4	100	92.775	ENSRROG00000029488	SCAF4	99	92.775	Rhinopithecus_roxellana
ENSTTRG00000010963	SCAF4	100	84.677	ENSSHAG00000001581	SCAF4	99	83.791	Sarcophilus_harrisii
ENSTTRG00000010963	SCAF4	67	52.685	ENSSFOG00015006338	scaf4a	54	57.353	Scleropages_formosus
ENSTTRG00000010963	SCAF4	65	57.358	ENSSMAG00000003738	scaf4b	52	71.519	Scophthalmus_maximus
ENSTTRG00000010963	SCAF4	80	51.979	ENSSMAG00000017901	scaf4a	52	52.915	Scophthalmus_maximus
ENSTTRG00000010963	SCAF4	100	88.957	ENSSARG00000009994	SCAF4	99	88.957	Sorex_araneus
ENSTTRG00000010963	SCAF4	100	91.107	ENSSSCG00000021023	SCAF4	99	90.759	Sus_scrofa
ENSTTRG00000010963	SCAF4	75	71.459	ENSTGUG00000013464	SCAF4	57	85.382	Taeniopygia_guttata
ENSTTRG00000010963	SCAF4	50	57.955	ENSTRUG00000009536	-	63	57.604	Takifugu_rubripes
ENSTTRG00000010963	SCAF4	100	92.369	ENSUAMG00000008860	SCAF4	99	92.635	Ursus_americanus
ENSTTRG00000010963	SCAF4	99	91.897	ENSUMAG00000016962	SCAF4	100	92.965	Ursus_maritimus
ENSTTRG00000010963	SCAF4	99	95.637	ENSVVUG00000002953	SCAF4	100	95.637	Vulpes_vulpes
ENSTTRG00000010963	SCAF4	99	56.573	ENSXETG00000007351	scaf4	62	65.268	Xenopus_tropicalis