EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000010966 (Gene tree)
Gene ID: -
Gene Symbol: SNRPN
Alias: HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 5726 bases
Position: chrscaffold_98419:91313-97038
Accession: 11164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000010395	LSM	PF01423.22	5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000010965	SNRPN-201	816	-	ENSTTRP00000010395	271 (aa)	-	UPI00018B5959

Gene Model

Click here to download ENSTTRG00000010966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000010966's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000010966	SNRPN	89	98.750	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSTTRG00000010966	SNRPN	89	97.934	ENSAMEG00000007034	SNRPN	99	97.934	Ailuropoda_melanoleuca
ENSTTRG00000010966	SNRPN	89	98.750	ENSANAG00000034241	SNRPN	100	98.750	Aotus_nancymaae
ENSTTRG00000010966	SNRPN	89	100.000	ENSBTAG00000008251	SNRPN	100	100.000	Bos_taurus
ENSTTRG00000010966	SNRPN	89	98.750	ENSCJAG00000003759	-	100	98.750	Callithrix_jacchus
ENSTTRG00000010966	SNRPN	84	98.246	ENSCJAG00000042622	-	95	98.246	Callithrix_jacchus
ENSTTRG00000010966	SNRPN	89	99.167	ENSCAFG00000010127	SNRPN	100	99.167	Canis_familiaris
ENSTTRG00000010966	SNRPN	89	99.167	ENSCAFG00020024075	SNRPN	100	99.167	Canis_lupus_dingo
ENSTTRG00000010966	SNRPN	89	100.000	ENSCHIG00000017477	SNRPN	100	100.000	Capra_hircus
ENSTTRG00000010966	SNRPN	89	98.750	ENSTSYG00000005248	SNRPN	100	98.750	Carlito_syrichta
ENSTTRG00000010966	SNRPN	89	98.750	ENSCAPG00000003047	SNRPN	100	98.750	Cavia_aperea
ENSTTRG00000010966	SNRPN	89	98.750	ENSCPOG00000020270	SNRPN	100	98.750	Cavia_porcellus
ENSTTRG00000010966	SNRPN	89	98.750	ENSCCAG00000024231	SNRPN	100	98.750	Cebus_capucinus
ENSTTRG00000010966	SNRPN	89	98.750	ENSCATG00000032518	SNRPN	100	98.750	Cercocebus_atys
ENSTTRG00000010966	SNRPN	89	98.750	ENSCLAG00000011376	SNRPN	100	98.750	Chinchilla_lanigera
ENSTTRG00000010966	SNRPN	89	98.750	ENSCSAG00000006406	SNRPN	100	98.750	Chlorocebus_sabaeus
ENSTTRG00000010966	SNRPN	95	93.411	ENSCHOG00000001846	SNRPN	95	93.411	Choloepus_hoffmanni
ENSTTRG00000010966	SNRPN	89	98.750	ENSCANG00000041156	SNRPN	100	98.750	Colobus_angolensis_palliatus
ENSTTRG00000010966	SNRPN	89	98.333	ENSCGRG00001004136	Snrpn	100	98.333	Cricetulus_griseus_chok1gshd
ENSTTRG00000010966	SNRPN	89	98.333	ENSCGRG00000001621	Snrpn	100	98.333	Cricetulus_griseus_crigri
ENSTTRG00000010966	SNRPN	64	92.486	ENSCVAG00000014193	SNRPN	75	90.710	Cyprinodon_variegatus
ENSTTRG00000010966	SNRPN	88	97.908	ENSDNOG00000037060	SNRPN	98	97.908	Dasypus_novemcinctus
ENSTTRG00000010966	SNRPN	89	99.167	ENSDORG00000004527	Snrpn	100	99.167	Dipodomys_ordii
ENSTTRG00000010966	SNRPN	89	99.167	ENSEASG00005017871	SNRPN	100	99.167	Equus_asinus_asinus
ENSTTRG00000010966	SNRPN	89	99.167	ENSECAG00000018148	SNRPN	100	99.167	Equus_caballus
ENSTTRG00000010966	SNRPN	88	98.745	ENSEEUG00000007440	-	100	98.745	Erinaceus_europaeus
ENSTTRG00000010966	SNRPN	89	99.167	ENSFCAG00000022298	-	100	99.167	Felis_catus
ENSTTRG00000010966	SNRPN	68	86.339	ENSFDAG00000010528	-	86	86.339	Fukomys_damarensis
ENSTTRG00000010966	SNRPN	89	99.167	ENSFDAG00000016578	-	100	99.167	Fukomys_damarensis
ENSTTRG00000010966	SNRPN	67	76.243	ENSGMOG00000018161	SNRPN	93	75.587	Gadus_morhua
ENSTTRG00000010966	SNRPN	79	72.093	ENSGGOG00000024469	-	93	73.659	Gorilla_gorilla
ENSTTRG00000010966	SNRPN	89	98.750	ENSGGOG00000003988	SNRPN	100	98.750	Gorilla_gorilla
ENSTTRG00000010966	SNRPN	79	89.202	ENSHGLG00000019812	-	89	89.671	Heterocephalus_glaber_female
ENSTTRG00000010966	SNRPN	89	84.167	ENSHGLG00000002327	-	92	83.710	Heterocephalus_glaber_female
ENSTTRG00000010966	SNRPN	89	98.750	ENSHGLG00000011924	SNRPN	100	98.750	Heterocephalus_glaber_female
ENSTTRG00000010966	SNRPN	79	80.465	ENSHGLG00000020936	-	75	81.250	Heterocephalus_glaber_female
ENSTTRG00000010966	SNRPN	89	81.667	ENSHGLG00100004881	-	92	81.900	Heterocephalus_glaber_male
ENSTTRG00000010966	SNRPN	79	89.202	ENSHGLG00100021056	-	89	89.671	Heterocephalus_glaber_male
ENSTTRG00000010966	SNRPN	89	98.750	ENSHGLG00100016559	SNRPN	100	98.750	Heterocephalus_glaber_male
ENSTTRG00000010966	SNRPN	89	98.750	ENSSTOG00000001339	SNRPN	100	98.750	Ictidomys_tridecemlineatus
ENSTTRG00000010966	SNRPN	88	99.163	ENSLAFG00000009458	SNRPN	99	99.163	Loxodonta_africana
ENSTTRG00000010966	SNRPN	89	98.750	ENSMFAG00000042235	SNRPN	100	98.750	Macaca_fascicularis
ENSTTRG00000010966	SNRPN	89	98.750	ENSMMUG00000023139	SNURF	100	98.750	Macaca_mulatta
ENSTTRG00000010966	SNRPN	89	98.750	ENSMNEG00000031291	SNRPN	100	98.750	Macaca_nemestrina
ENSTTRG00000010966	SNRPN	89	98.750	ENSMLEG00000038837	SNRPN	100	98.750	Mandrillus_leucophaeus
ENSTTRG00000010966	SNRPN	81	85.000	ENSMGAG00000008696	SNRPN	92	85.000	Meleagris_gallopavo
ENSTTRG00000010966	SNRPN	89	98.750	ENSMAUG00000000051	Snrpn	100	98.750	Mesocricetus_auratus
ENSTTRG00000010966	SNRPN	89	98.750	ENSMICG00000042356	SNRPN	100	98.750	Microcebus_murinus
ENSTTRG00000010966	SNRPN	89	98.750	ENSMOCG00000015350	Snrpn	100	98.750	Microtus_ochrogaster
ENSTTRG00000010966	SNRPN	82	93.213	ENSMODG00000013926	-	92	93.213	Monodelphis_domestica
ENSTTRG00000010966	SNRPN	89	98.750	MGP_CAROLIEiJ_G0029815	Snrpn	100	98.750	Mus_caroli
ENSTTRG00000010966	SNRPN	89	98.750	ENSMUSG00000102252	Snrpn	100	98.750	Mus_musculus
ENSTTRG00000010966	SNRPN	89	98.750	MGP_PahariEiJ_G0013040	Snrpn	100	98.750	Mus_pahari
ENSTTRG00000010966	SNRPN	89	98.750	MGP_SPRETEiJ_G0030918	Snrpn	100	98.750	Mus_spretus
ENSTTRG00000010966	SNRPN	89	99.167	ENSMPUG00000014638	-	100	99.167	Mustela_putorius_furo
ENSTTRG00000010966	SNRPN	78	50.711	ENSMPUG00000007115	-	64	70.423	Mustela_putorius_furo
ENSTTRG00000010966	SNRPN	75	61.275	ENSMLUG00000025849	-	78	61.677	Myotis_lucifugus
ENSTTRG00000010966	SNRPN	88	99.582	ENSMLUG00000023361	-	98	99.582	Myotis_lucifugus
ENSTTRG00000010966	SNRPN	84	62.281	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSTTRG00000010966	SNRPN	89	98.750	ENSNGAG00000000181	Snrpn	100	98.750	Nannospalax_galili
ENSTTRG00000010966	SNRPN	89	82.158	ENSNLEG00000001376	SNRPN	100	82.158	Nomascus_leucogenys
ENSTTRG00000010966	SNRPN	89	99.167	ENSODEG00000013478	-	100	99.167	Octodon_degus
ENSTTRG00000010966	SNRPN	86	82.051	ENSODEG00000016065	-	87	83.092	Octodon_degus
ENSTTRG00000010966	SNRPN	89	95.417	ENSODEG00000019708	-	93	98.643	Octodon_degus
ENSTTRG00000010966	SNRPN	89	98.750	ENSODEG00000020110	-	100	98.750	Octodon_degus
ENSTTRG00000010966	SNRPN	89	98.340	ENSOCUG00000003532	-	100	98.340	Oryctolagus_cuniculus
ENSTTRG00000010966	SNRPN	67	90.608	ENSORLG00020007490	SNRPN	75	90.710	Oryzias_latipes_hni
ENSTTRG00000010966	SNRPN	67	90.608	ENSORLG00015003332	SNRPN	75	90.710	Oryzias_latipes_hsok
ENSTTRG00000010966	SNRPN	67	91.160	ENSOMEG00000002066	SNRPN	75	91.257	Oryzias_melastigma
ENSTTRG00000010966	SNRPN	89	98.750	ENSOGAG00000007392	SNRPN	100	98.750	Otolemur_garnettii
ENSTTRG00000010966	SNRPN	89	100.000	ENSOARG00000009080	SNRPN	100	100.000	Ovis_aries
ENSTTRG00000010966	SNRPN	86	67.949	ENSPPAG00000034049	-	86	70.813	Pan_paniscus
ENSTTRG00000010966	SNRPN	89	98.750	ENSPPAG00000027650	SNRPN	100	98.750	Pan_paniscus
ENSTTRG00000010966	SNRPN	76	63.415	ENSPPRG00000006957	-	80	69.277	Panthera_pardus
ENSTTRG00000010966	SNRPN	89	99.167	ENSPPRG00000019878	-	100	99.167	Panthera_pardus
ENSTTRG00000010966	SNRPN	89	98.750	ENSPTIG00000004537	SNRPN	100	98.750	Panthera_tigris_altaica
ENSTTRG00000010966	SNRPN	89	98.750	ENSPTRG00000006826	SNRPN	100	98.750	Pan_troglodytes
ENSTTRG00000010966	SNRPN	86	68.376	ENSPTRG00000052400	-	86	71.292	Pan_troglodytes
ENSTTRG00000010966	SNRPN	89	98.750	ENSPANG00000020142	SNRPN	100	98.750	Papio_anubis
ENSTTRG00000010966	SNRPN	89	98.750	ENSPEMG00000012911	-	100	98.750	Peromyscus_maniculatus_bairdii
ENSTTRG00000010966	SNRPN	82	85.520	ENSPEMG00000013920	-	91	85.973	Peromyscus_maniculatus_bairdii
ENSTTRG00000010966	SNRPN	84	94.298	ENSPEMG00000020979	-	95	94.298	Peromyscus_maniculatus_bairdii
ENSTTRG00000010966	SNRPN	81	94.091	ENSPCIG00000004699	-	70	94.091	Phascolarctos_cinereus
ENSTTRG00000010966	SNRPN	64	92.486	ENSPMEG00000020674	SNRPN	75	91.257	Poecilia_mexicana
ENSTTRG00000010966	SNRPN	89	98.750	ENSPPYG00000006269	SNURF	100	98.750	Pongo_abelii
ENSTTRG00000010966	SNRPN	89	98.750	ENSPCOG00000014231	SNRPN	100	98.750	Propithecus_coquereli
ENSTTRG00000010966	SNRPN	89	98.750	ENSRNOG00000059764	Snrpn	100	98.750	Rattus_norvegicus
ENSTTRG00000010966	SNRPN	89	98.750	ENSRBIG00000041765	SNRPN	100	98.750	Rhinopithecus_bieti
ENSTTRG00000010966	SNRPN	89	98.750	ENSRROG00000035157	SNRPN	100	98.750	Rhinopithecus_roxellana
ENSTTRG00000010966	SNRPN	89	98.750	ENSSBOG00000000110	-	100	98.750	Saimiri_boliviensis_boliviensis
ENSTTRG00000010966	SNRPN	89	97.917	ENSSBOG00000024929	-	100	97.917	Saimiri_boliviensis_boliviensis
ENSTTRG00000010966	SNRPN	82	93.665	ENSSHAG00000010257	-	91	93.665	Sarcophilus_harrisii
ENSTTRG00000010966	SNRPN	88	78.243	ENSSARG00000000072	SNRPN	100	78.243	Sorex_araneus
ENSTTRG00000010966	SNRPN	89	99.583	ENSSSCG00000028124	SNRPN	100	99.583	Sus_scrofa
ENSTTRG00000010966	SNRPN	82	99.103	ENSUAMG00000016284	SNRPN	78	99.103	Ursus_americanus
ENSTTRG00000010966	SNRPN	89	99.167	ENSUMAG00000025589	SNRPN	100	99.167	Ursus_maritimus
ENSTTRG00000010966	SNRPN	85	99.127	ENSVVUG00000017971	SNRPN	94	99.127	Vulpes_vulpes