EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000011043 (Gene tree)
Gene ID: -
Gene Symbol: LSM14B
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 10568 bases
Position: chrGeneScaffold_1906:106-10673
Accession: 15887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000010460	FDF	PF09532.10	2.3e-25	1	1
ENSTTRP00000010460	LSM14	PF12701.7	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000011035	LSM14B-201	1155	-	ENSTTRP00000010460	384 (aa)	-	UPI00018B72DC

Gene Model

Click here to download ENSTTRG00000011043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000011043's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000011043	LSM14B	100	61.097	ENSG00000149657	LSM14B	71	100.000	Homo_sapiens
ENSTTRG00000011043	LSM14B	81	100.000	ENSAMEG00000013430	LSM14B	83	100.000	Ailuropoda_melanoleuca
ENSTTRG00000011043	LSM14B	90	37.127	ENSACIG00000012266	lsm14b	72	82.051	Amphilophus_citrinellus
ENSTTRG00000011043	LSM14B	90	39.237	ENSAOCG00000012380	lsm14b	74	80.952	Amphiprion_ocellaris
ENSTTRG00000011043	LSM14B	72	70.000	ENSAPLG00000013203	LSM14B	81	70.312	Anas_platyrhynchos
ENSTTRG00000011043	LSM14B	82	97.436	ENSACAG00000016195	LSM14B	83	97.436	Anolis_carolinensis
ENSTTRG00000011043	LSM14B	100	63.721	ENSANAG00000037915	LSM14B	85	100.000	Aotus_nancymaae
ENSTTRG00000011043	LSM14B	89	35.772	ENSACLG00000019663	lsm14b	74	82.051	Astatotilapia_calliptera
ENSTTRG00000011043	LSM14B	83	100.000	ENSBTAG00000021558	LSM14B	85	100.000	Bos_taurus
ENSTTRG00000011043	LSM14B	100	64.235	ENSCJAG00000014434	LSM14B	83	100.000	Callithrix_jacchus
ENSTTRG00000011043	LSM14B	72	71.473	ENSCAFG00000012518	LSM14B	81	73.817	Canis_familiaris
ENSTTRG00000011043	LSM14B	83	100.000	ENSCAFG00020022150	LSM14B	85	100.000	Canis_lupus_dingo
ENSTTRG00000011043	LSM14B	83	100.000	ENSCHIG00000010284	-	85	100.000	Capra_hircus
ENSTTRG00000011043	LSM14B	50	83.226	ENSCHIG00000022681	-	53	83.660	Capra_hircus
ENSTTRG00000011043	LSM14B	75	68.013	ENSTSYG00000031914	LSM14B	72	68.729	Carlito_syrichta
ENSTTRG00000011043	LSM14B	75	69.024	ENSCAPG00000013059	LSM14B	71	95.238	Cavia_aperea
ENSTTRG00000011043	LSM14B	75	69.360	ENSCPOG00000038080	LSM14B	71	95.238	Cavia_porcellus
ENSTTRG00000011043	LSM14B	75	85.714	ENSCCAG00000024900	-	77	85.714	Cebus_capucinus
ENSTTRG00000011043	LSM14B	100	60.902	ENSCCAG00000021267	LSM14B	67	100.000	Cebus_capucinus
ENSTTRG00000011043	LSM14B	75	65.894	ENSCLAG00000003186	LSM14B	100	70.164	Chinchilla_lanigera
ENSTTRG00000011043	LSM14B	68	80.916	ENSCHOG00000006997	-	100	80.916	Choloepus_hoffmanni
ENSTTRG00000011043	LSM14B	82	94.872	ENSCPBG00000027065	LSM14B	84	94.872	Chrysemys_picta_bellii
ENSTTRG00000011043	LSM14B	75	66.124	ENSCANG00000036986	LSM14B	81	68.729	Colobus_angolensis_palliatus
ENSTTRG00000011043	LSM14B	100	62.000	ENSCGRG00001018399	Lsm14b	83	100.000	Cricetulus_griseus_chok1gshd
ENSTTRG00000011043	LSM14B	67	69.799	ENSCGRG00000006111	-	100	73.154	Cricetulus_griseus_crigri
ENSTTRG00000011043	LSM14B	91	37.940	ENSCSEG00000004722	lsm14b	75	76.190	Cynoglossus_semilaevis
ENSTTRG00000011043	LSM14B	77	71.795	ENSCSEG00000020669	LSM14B	74	71.795	Cynoglossus_semilaevis
ENSTTRG00000011043	LSM14B	65	36.471	ENSCVAG00000012433	-	55	43.200	Cyprinodon_variegatus
ENSTTRG00000011043	LSM14B	99	40.247	ENSDARG00000025386	lsm14b	81	97.436	Danio_rerio
ENSTTRG00000011043	LSM14B	69	71.242	ENSDNOG00000025246	LSM14B	100	69.281	Dasypus_novemcinctus
ENSTTRG00000011043	LSM14B	75	67.340	ENSDORG00000016683	Lsm14b	71	91.503	Dipodomys_ordii
ENSTTRG00000011043	LSM14B	57	59.574	ENSETEG00000011188	-	96	62.609	Echinops_telfairi
ENSTTRG00000011043	LSM14B	85	79.070	ENSETEG00000001869	-	83	79.070	Echinops_telfairi
ENSTTRG00000011043	LSM14B	69	80.071	ENSEASG00005023218	LSM14B	100	77.224	Equus_asinus_asinus
ENSTTRG00000011043	LSM14B	83	100.000	ENSECAG00000010659	LSM14B	85	100.000	Equus_caballus
ENSTTRG00000011043	LSM14B	72	76.190	ENSELUG00000016299	LSM14B	80	81.081	Esox_lucius
ENSTTRG00000011043	LSM14B	96	42.708	ENSELUG00000005780	lsm14b	74	92.308	Esox_lucius
ENSTTRG00000011043	LSM14B	83	100.000	ENSFCAG00000003248	LSM14B	83	100.000	Felis_catus
ENSTTRG00000011043	LSM14B	72	69.159	ENSFALG00000010618	LSM14B	83	70.717	Ficedula_albicollis
ENSTTRG00000011043	LSM14B	75	67.450	ENSFDAG00000002214	LSM14B	100	72.459	Fukomys_damarensis
ENSTTRG00000011043	LSM14B	82	78.571	ENSFHEG00000006237	lsm14b	83	78.571	Fundulus_heteroclitus
ENSTTRG00000011043	LSM14B	100	37.685	ENSGMOG00000017115	lsm14b	68	83.333	Gadus_morhua
ENSTTRG00000011043	LSM14B	82	94.872	ENSGALG00000005125	LSM14B	85	94.872	Gallus_gallus
ENSTTRG00000011043	LSM14B	66	39.764	ENSGAFG00000013723	LSM14B	87	36.481	Gambusia_affinis
ENSTTRG00000011043	LSM14B	56	50.391	ENSGAGG00000004106	LSM14B	99	55.282	Gopherus_agassizii
ENSTTRG00000011043	LSM14B	75	66.776	ENSGGOG00000005630	LSM14B	100	71.895	Gorilla_gorilla
ENSTTRG00000011043	LSM14B	100	60.401	ENSHGLG00000015055	LSM14B	83	100.000	Heterocephalus_glaber_female
ENSTTRG00000011043	LSM14B	75	63.576	ENSHGLG00100015273	LSM14B	100	72.185	Heterocephalus_glaber_male
ENSTTRG00000011043	LSM14B	59	41.048	ENSHCOG00000004867	lsm14b	86	39.744	Hippocampus_comes
ENSTTRG00000011043	LSM14B	90	38.298	ENSIPUG00000014946	lsm14b	77	94.872	Ictalurus_punctatus
ENSTTRG00000011043	LSM14B	75	67.105	ENSSTOG00000020482	LSM14B	100	71.803	Ictidomys_tridecemlineatus
ENSTTRG00000011043	LSM14B	99	60.406	ENSJJAG00000012728	Lsm14b	82	100.000	Jaculus_jaculus
ENSTTRG00000011043	LSM14B	90	37.330	ENSKMAG00000017524	lsm14b	75	76.190	Kryptolebias_marmoratus
ENSTTRG00000011043	LSM14B	69	41.132	ENSLBEG00000007951	LSM14B	86	41.631	Labrus_bergylta
ENSTTRG00000011043	LSM14B	99	50.827	ENSLACG00000003849	LSM14B	85	89.744	Latimeria_chalumnae
ENSTTRG00000011043	LSM14B	82	92.308	ENSLOCG00000003746	lsm14b	83	92.308	Lepisosteus_oculatus
ENSTTRG00000011043	LSM14B	72	71.025	ENSLAFG00000007492	LSM14B	80	70.423	Loxodonta_africana
ENSTTRG00000011043	LSM14B	100	66.824	ENSMFAG00000041479	LSM14B	100	66.824	Macaca_fascicularis
ENSTTRG00000011043	LSM14B	100	61.097	ENSMMUG00000014084	LSM14B	70	100.000	Macaca_mulatta
ENSTTRG00000011043	LSM14B	100	61.097	ENSMNEG00000045573	LSM14B	70	100.000	Macaca_nemestrina
ENSTTRG00000011043	LSM14B	75	66.118	ENSMLEG00000040895	LSM14B	63	83.036	Mandrillus_leucophaeus
ENSTTRG00000011043	LSM14B	73	78.571	ENSMAMG00000020539	lsm14b	75	78.571	Mastacembelus_armatus
ENSTTRG00000011043	LSM14B	85	74.359	ENSMAMG00000024124	LSM14B	73	74.359	Mastacembelus_armatus
ENSTTRG00000011043	LSM14B	89	35.230	ENSMZEG00005000987	lsm14b	74	82.051	Maylandia_zebra
ENSTTRG00000011043	LSM14B	72	63.729	ENSMGAG00000005300	LSM14B	79	66.667	Meleagris_gallopavo
ENSTTRG00000011043	LSM14B	100	60.298	ENSMAUG00000020700	Lsm14b	83	95.238	Mesocricetus_auratus
ENSTTRG00000011043	LSM14B	100	65.176	ENSMICG00000014675	LSM14B	68	100.000	Microcebus_murinus
ENSTTRG00000011043	LSM14B	100	59.705	ENSMOCG00000020600	Lsm14b	83	100.000	Microtus_ochrogaster
ENSTTRG00000011043	LSM14B	61	54.513	ENSMOCG00000005119	-	60	77.419	Microtus_ochrogaster
ENSTTRG00000011043	LSM14B	73	74.359	ENSMMOG00000017321	LSM14B	71	74.359	Mola_mola
ENSTTRG00000011043	LSM14B	69	67.541	ENSMODG00000016690	LSM14B	71	96.825	Monodelphis_domestica
ENSTTRG00000011043	LSM14B	95	40.327	ENSMALG00000004783	lsm14b	73	76.316	Monopterus_albus
ENSTTRG00000011043	LSM14B	100	64.858	MGP_CAROLIEiJ_G0024770	Lsm14b	85	100.000	Mus_caroli
ENSTTRG00000011043	LSM14B	100	61.250	ENSMUSG00000039108	Lsm14b	83	100.000	Mus_musculus
ENSTTRG00000011043	LSM14B	100	65.094	MGP_PahariEiJ_G0026214	Lsm14b	85	100.000	Mus_pahari
ENSTTRG00000011043	LSM14B	100	65.094	MGP_SPRETEiJ_G0025693	Lsm14b	85	100.000	Mus_spretus
ENSTTRG00000011043	LSM14B	75	75.000	ENSMPUG00000007584	LSM14B	81	75.000	Mustela_putorius_furo
ENSTTRG00000011043	LSM14B	100	61.194	ENSMLUG00000000304	LSM14B	84	100.000	Myotis_lucifugus
ENSTTRG00000011043	LSM14B	75	66.447	ENSNLEG00000015757	LSM14B	81	66.212	Nomascus_leucogenys
ENSTTRG00000011043	LSM14B	63	100.000	ENSMEUG00000008267	-	68	100.000	Notamacropus_eugenii
ENSTTRG00000011043	LSM14B	100	61.404	ENSODEG00000004099	LSM14B	71	95.238	Octodon_degus
ENSTTRG00000011043	LSM14B	89	36.585	ENSONIG00000020318	lsm14b	75	82.051	Oreochromis_niloticus
ENSTTRG00000011043	LSM14B	55	95.238	ENSOANG00000003370	LSM14B	73	95.238	Ornithorhynchus_anatinus
ENSTTRG00000011043	LSM14B	75	65.993	ENSOCUG00000006279	LSM14B	81	67.123	Oryctolagus_cuniculus
ENSTTRG00000011043	LSM14B	74	74.359	ENSORLG00000028353	LSM14B	73	74.359	Oryzias_latipes
ENSTTRG00000011043	LSM14B	65	49.057	ENSORLG00000013525	lsm14b	75	78.571	Oryzias_latipes
ENSTTRG00000011043	LSM14B	74	74.359	ENSORLG00015013157	LSM14B	73	74.359	Oryzias_latipes_hsok
ENSTTRG00000011043	LSM14B	100	65.412	ENSOGAG00000003915	LSM14B	85	100.000	Otolemur_garnettii
ENSTTRG00000011043	LSM14B	72	74.214	ENSOARG00000014706	LSM14B	81	76.025	Ovis_aries
ENSTTRG00000011043	LSM14B	75	66.776	ENSPPAG00000035799	LSM14B	63	83.036	Pan_paniscus
ENSTTRG00000011043	LSM14B	83	100.000	ENSPPRG00000009197	LSM14B	83	100.000	Panthera_pardus
ENSTTRG00000011043	LSM14B	67	71.429	ENSPTIG00000021518	LSM14B	100	72.297	Panthera_tigris_altaica
ENSTTRG00000011043	LSM14B	100	61.097	ENSPTRG00000013696	LSM14B	70	100.000	Pan_troglodytes
ENSTTRG00000011043	LSM14B	100	60.848	ENSPANG00000011747	LSM14B	70	100.000	Papio_anubis
ENSTTRG00000011043	LSM14B	99	41.935	ENSPKIG00000003275	lsm14b	50	92.308	Paramormyrops_kingsleyae
ENSTTRG00000011043	LSM14B	69	66.013	ENSPSIG00000014762	LSM14B	100	67.320	Pelodiscus_sinensis
ENSTTRG00000011043	LSM14B	99	61.364	ENSPEMG00000017688	Lsm14b	83	100.000	Peromyscus_maniculatus_bairdii
ENSTTRG00000011043	LSM14B	83	100.000	ENSPCIG00000013405	LSM14B	83	100.000	Phascolarctos_cinereus
ENSTTRG00000011043	LSM14B	100	39.163	ENSPFOG00000005631	lsm14b	76	78.571	Poecilia_formosa
ENSTTRG00000011043	LSM14B	100	38.710	ENSPLAG00000002449	lsm14b	75	78.571	Poecilia_latipinna
ENSTTRG00000011043	LSM14B	100	38.462	ENSPMEG00000000745	lsm14b	75	78.571	Poecilia_mexicana
ENSTTRG00000011043	LSM14B	100	77.922	ENSPPYG00000011194	LSM14B	83	92.857	Pongo_abelii
ENSTTRG00000011043	LSM14B	100	61.654	ENSPCOG00000013625	LSM14B	83	100.000	Propithecus_coquereli
ENSTTRG00000011043	LSM14B	73	89.362	ENSPVAG00000017918	LSM14B	91	89.170	Pteropus_vampyrus
ENSTTRG00000011043	LSM14B	81	97.436	ENSPNAG00000012777	lsm14b	83	97.436	Pygocentrus_nattereri
ENSTTRG00000011043	LSM14B	100	65.094	ENSRNOG00000054557	Lsm14b	85	100.000	Rattus_norvegicus
ENSTTRG00000011043	LSM14B	75	69.880	ENSRBIG00000033461	LSM14B	80	69.072	Rhinopithecus_bieti
ENSTTRG00000011043	LSM14B	75	66.450	ENSRROG00000042949	LSM14B	50	95.425	Rhinopithecus_roxellana
ENSTTRG00000011043	LSM14B	58	95.425	ENSSBOG00000032820	LSM14B	74	95.425	Saimiri_boliviensis_boliviensis
ENSTTRG00000011043	LSM14B	72	63.605	ENSSHAG00000015528	LSM14B	100	67.541	Sarcophilus_harrisii
ENSTTRG00000011043	LSM14B	81	69.231	ENSSMAG00000000135	LSM14B	75	69.231	Scophthalmus_maximus
ENSTTRG00000011043	LSM14B	76	76.923	ENSSDUG00000022770	LSM14B	73	76.923	Seriola_dumerili
ENSTTRG00000011043	LSM14B	82	94.872	ENSSPUG00000014360	LSM14B	84	94.872	Sphenodon_punctatus
ENSTTRG00000011043	LSM14B	66	36.567	ENSSPAG00000018854	-	88	34.568	Stegastes_partitus
ENSTTRG00000011043	LSM14B	73	80.952	ENSSPAG00000020915	lsm14b	73	80.952	Stegastes_partitus
ENSTTRG00000011043	LSM14B	83	100.000	ENSSSCG00000026052	LSM14B	100	71.895	Sus_scrofa
ENSTTRG00000011043	LSM14B	72	63.423	ENSTGUG00000007884	LSM14B	81	61.745	Taeniopygia_guttata
ENSTTRG00000011043	LSM14B	82	76.190	ENSTRUG00000011354	lsm14b	82	76.190	Takifugu_rubripes
ENSTTRG00000011043	LSM14B	92	38.845	ENSTNIG00000002445	lsm14b	54	76.190	Tetraodon_nigroviridis
ENSTTRG00000011043	LSM14B	72	80.000	ENSUAMG00000025298	LSM14B	74	79.730	Ursus_americanus
ENSTTRG00000011043	LSM14B	72	80.000	ENSUMAG00000000480	LSM14B	74	79.730	Ursus_maritimus
ENSTTRG00000011043	LSM14B	69	77.857	ENSVVUG00000015920	LSM14B	100	77.857	Vulpes_vulpes
ENSTTRG00000011043	LSM14B	84	50.543	ENSXETG00000001997	lsm14b	82	94.872	Xenopus_tropicalis