EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000011056 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 22828 bases
Position: chrGeneScaffold_490:312964-335791
Accession: 9348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000010481	zf-C2H2	PF00096.26	1.9e-19	1	2
ENSTTRP00000010481	zf-C2H2	PF00096.26	1.9e-19	2	2
ENSTTRP00000010481	zf-met	PF12874.7	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000011056	PRDM4-201	2406	-	ENSTTRP00000010481	801 (aa)	-	UPI00018B74C9

Gene Model

Click here to download ENSTTRG00000011056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000011056's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000011056	PRDM4	100	96.754	ENSG00000110851	PRDM4	100	98.667	Homo_sapiens
ENSTTRG00000011056	PRDM4	99	96.871	ENSAMEG00000016174	PRDM4	99	96.871	Ailuropoda_melanoleuca
ENSTTRG00000011056	PRDM4	99	87.343	ENSAPLG00000009846	PRDM4	99	86.842	Anas_platyrhynchos
ENSTTRG00000011056	PRDM4	100	96.629	ENSANAG00000024800	PRDM4	100	96.629	Aotus_nancymaae
ENSTTRG00000011056	PRDM4	100	97.753	ENSBTAG00000012999	PRDM4	100	97.753	Bos_taurus
ENSTTRG00000011056	PRDM4	100	96.130	ENSCJAG00000015261	PRDM4	100	96.130	Callithrix_jacchus
ENSTTRG00000011056	PRDM4	100	97.129	ENSCAFG00000001788	PRDM4	100	97.129	Canis_familiaris
ENSTTRG00000011056	PRDM4	100	97.129	ENSCAFG00020004916	PRDM4	100	97.129	Canis_lupus_dingo
ENSTTRG00000011056	PRDM4	100	97.628	ENSCHIG00000019409	PRDM4	100	97.628	Capra_hircus
ENSTTRG00000011056	PRDM4	100	96.629	ENSTSYG00000009248	PRDM4	100	96.629	Carlito_syrichta
ENSTTRG00000011056	PRDM4	99	91.114	ENSCAPG00000013937	PRDM4	99	91.114	Cavia_aperea
ENSTTRG00000011056	PRDM4	99	90.559	ENSCPOG00000022385	PRDM4	100	90.559	Cavia_porcellus
ENSTTRG00000011056	PRDM4	100	96.754	ENSCCAG00000036033	PRDM4	100	96.754	Cebus_capucinus
ENSTTRG00000011056	PRDM4	100	96.504	ENSCATG00000044797	PRDM4	100	96.504	Cercocebus_atys
ENSTTRG00000011056	PRDM4	99	93.159	ENSCLAG00000007545	PRDM4	100	93.408	Chinchilla_lanigera
ENSTTRG00000011056	PRDM4	100	96.629	ENSCSAG00000002896	PRDM4	100	96.629	Chlorocebus_sabaeus
ENSTTRG00000011056	PRDM4	71	97.273	ENSCHOG00000001744	PRDM4	86	97.273	Choloepus_hoffmanni
ENSTTRG00000011056	PRDM4	99	87.829	ENSCPBG00000023187	PRDM4	100	87.327	Chrysemys_picta_bellii
ENSTTRG00000011056	PRDM4	100	96.504	ENSCANG00000021804	PRDM4	100	96.504	Colobus_angolensis_palliatus
ENSTTRG00000011056	PRDM4	99	92.662	ENSCGRG00001015102	-	100	92.413	Cricetulus_griseus_chok1gshd
ENSTTRG00000011056	PRDM4	96	92.645	ENSCGRG00000004044	-	100	92.387	Cricetulus_griseus_crigri
ENSTTRG00000011056	PRDM4	100	95.755	ENSDNOG00000032478	PRDM4	100	96.848	Dasypus_novemcinctus
ENSTTRG00000011056	PRDM4	99	80.928	ENSDORG00000015081	-	100	81.054	Dipodomys_ordii
ENSTTRG00000011056	PRDM4	93	45.658	ENSEBUG00000003775	prdm4	99	45.920	Eptatretus_burgeri
ENSTTRG00000011056	PRDM4	100	97.753	ENSECAG00000015423	PRDM4	100	97.753	Equus_caballus
ENSTTRG00000011056	PRDM4	94	92.810	ENSEEUG00000006569	PRDM4	99	92.543	Erinaceus_europaeus
ENSTTRG00000011056	PRDM4	99	60.510	ENSELUG00000015265	prdm4	99	60.267	Esox_lucius
ENSTTRG00000011056	PRDM4	100	97.503	ENSFCAG00000022478	PRDM4	100	97.503	Felis_catus
ENSTTRG00000011056	PRDM4	99	87.327	ENSFALG00000013342	PRDM4	100	86.951	Ficedula_albicollis
ENSTTRG00000011056	PRDM4	100	86.800	ENSGALG00000012619	PRDM4	100	86.301	Gallus_gallus
ENSTTRG00000011056	PRDM4	99	87.469	ENSGAGG00000002763	PRDM4	95	86.967	Gopherus_agassizii
ENSTTRG00000011056	PRDM4	99	96.625	ENSGGOG00000001244	PRDM4	99	96.625	Gorilla_gorilla
ENSTTRG00000011056	PRDM4	99	94.354	ENSHGLG00000004590	PRDM4	98	93.977	Heterocephalus_glaber_female
ENSTTRG00000011056	PRDM4	99	93.168	ENSHGLG00100007464	PRDM4	100	92.795	Heterocephalus_glaber_male
ENSTTRG00000011056	PRDM4	95	61.010	ENSIPUG00000024162	prdm4	93	61.097	Ictalurus_punctatus
ENSTTRG00000011056	PRDM4	100	95.755	ENSSTOG00000016168	PRDM4	100	95.755	Ictidomys_tridecemlineatus
ENSTTRG00000011056	PRDM4	82	93.548	ENSJJAG00000022448	-	95	93.548	Jaculus_jaculus
ENSTTRG00000011056	PRDM4	99	72.030	ENSLACG00000007452	PRDM4	99	72.772	Latimeria_chalumnae
ENSTTRG00000011056	PRDM4	78	41.689	ENSLOCG00000017092	prdm4	100	53.680	Lepisosteus_oculatus
ENSTTRG00000011056	PRDM4	98	97.081	ENSLAFG00000001483	PRDM4	100	97.081	Loxodonta_africana
ENSTTRG00000011056	PRDM4	100	96.754	ENSMFAG00000041862	PRDM4	100	96.754	Macaca_fascicularis
ENSTTRG00000011056	PRDM4	100	96.754	ENSMMUG00000015550	PRDM4	100	96.754	Macaca_mulatta
ENSTTRG00000011056	PRDM4	100	96.504	ENSMNEG00000032319	PRDM4	100	96.504	Macaca_nemestrina
ENSTTRG00000011056	PRDM4	100	96.629	ENSMLEG00000039607	PRDM4	100	96.629	Mandrillus_leucophaeus
ENSTTRG00000011056	PRDM4	99	79.250	ENSMGAG00000012815	PRDM4	100	78.750	Meleagris_gallopavo
ENSTTRG00000011056	PRDM4	100	95.506	ENSMICG00000007807	PRDM4	100	95.506	Microcebus_murinus
ENSTTRG00000011056	PRDM4	99	93.734	ENSMOCG00000000753	Prdm4	99	93.484	Microtus_ochrogaster
ENSTTRG00000011056	PRDM4	99	94.730	ENSMUSG00000035529	Prdm4	100	94.479	Mus_musculus
ENSTTRG00000011056	PRDM4	99	93.977	MGP_PahariEiJ_G0031398	Prdm4	100	94.028	Mus_pahari
ENSTTRG00000011056	PRDM4	99	95.107	MGP_SPRETEiJ_G0016505	Prdm4	100	95.172	Mus_spretus
ENSTTRG00000011056	PRDM4	99	91.022	ENSMPUG00000012238	PRDM4	99	91.022	Mustela_putorius_furo
ENSTTRG00000011056	PRDM4	99	96.742	ENSMLUG00000000767	PRDM4	99	96.742	Myotis_lucifugus
ENSTTRG00000011056	PRDM4	99	95.609	ENSNGAG00000018627	Prdm4	100	95.609	Nannospalax_galili
ENSTTRG00000011056	PRDM4	100	96.879	ENSNLEG00000006748	PRDM4	100	96.879	Nomascus_leucogenys
ENSTTRG00000011056	PRDM4	89	90.141	ENSMEUG00000004495	PRDM4	89	90.141	Notamacropus_eugenii
ENSTTRG00000011056	PRDM4	88	94.643	ENSOPRG00000010192	PRDM4	89	94.643	Ochotona_princeps
ENSTTRG00000011056	PRDM4	99	91.250	ENSODEG00000014750	PRDM4	99	91.125	Octodon_degus
ENSTTRG00000011056	PRDM4	100	91.011	ENSOANG00000005526	PRDM4	100	91.011	Ornithorhynchus_anatinus
ENSTTRG00000011056	PRDM4	93	97.282	ENSOCUG00000012859	PRDM4	96	97.282	Oryctolagus_cuniculus
ENSTTRG00000011056	PRDM4	99	96.989	ENSOGAG00000011945	PRDM4	100	96.989	Otolemur_garnettii
ENSTTRG00000011056	PRDM4	100	97.628	ENSOARG00000017955	PRDM4	100	97.628	Ovis_aries
ENSTTRG00000011056	PRDM4	100	96.754	ENSPPAG00000038438	PRDM4	100	96.754	Pan_paniscus
ENSTTRG00000011056	PRDM4	100	97.503	ENSPPRG00000004144	PRDM4	100	97.503	Panthera_pardus
ENSTTRG00000011056	PRDM4	100	97.503	ENSPTIG00000005847	PRDM4	100	97.503	Panthera_tigris_altaica
ENSTTRG00000011056	PRDM4	100	96.754	ENSPTRG00000005400	PRDM4	100	96.754	Pan_troglodytes
ENSTTRG00000011056	PRDM4	100	96.754	ENSPANG00000022084	PRDM4	100	96.754	Papio_anubis
ENSTTRG00000011056	PRDM4	99	60.451	ENSPKIG00000000875	prdm4	99	60.570	Paramormyrops_kingsleyae
ENSTTRG00000011056	PRDM4	91	80.989	ENSPSIG00000012066	PRDM4	100	80.989	Pelodiscus_sinensis
ENSTTRG00000011056	PRDM4	99	95.358	ENSPEMG00000014598	Prdm4	100	95.358	Peromyscus_maniculatus_bairdii
ENSTTRG00000011056	PRDM4	100	89.552	ENSPCIG00000009471	PRDM4	100	89.552	Phascolarctos_cinereus
ENSTTRG00000011056	PRDM4	100	96.629	ENSPPYG00000004913	PRDM4	100	96.629	Pongo_abelii
ENSTTRG00000011056	PRDM4	83	97.917	ENSPCAG00000009987	PRDM4	83	97.917	Procavia_capensis
ENSTTRG00000011056	PRDM4	100	95.381	ENSPCOG00000021060	PRDM4	100	95.381	Propithecus_coquereli
ENSTTRG00000011056	PRDM4	100	96.758	ENSPVAG00000001596	PRDM4	100	96.758	Pteropus_vampyrus
ENSTTRG00000011056	PRDM4	99	94.486	ENSRNOG00000004962	Prdm4	100	94.110	Rattus_norvegicus
ENSTTRG00000011056	PRDM4	100	96.504	ENSRBIG00000035488	PRDM4	100	96.504	Rhinopithecus_bieti
ENSTTRG00000011056	PRDM4	100	96.629	ENSRROG00000012779	PRDM4	100	96.629	Rhinopithecus_roxellana
ENSTTRG00000011056	PRDM4	100	96.629	ENSSBOG00000000403	PRDM4	100	96.629	Saimiri_boliviensis_boliviensis
ENSTTRG00000011056	PRDM4	99	63.793	ENSSFOG00015023358	prdm4	99	63.793	Scleropages_formosus
ENSTTRG00000011056	PRDM4	100	97.753	ENSSSCG00000000160	PRDM4	100	97.753	Sus_scrofa
ENSTTRG00000011056	PRDM4	99	87.469	ENSTGUG00000010962	-	99	87.093	Taeniopygia_guttata
ENSTTRG00000011056	PRDM4	73	90.102	ENSTBEG00000001732	PRDM4	84	90.102	Tupaia_belangeri
ENSTTRG00000011056	PRDM4	100	97.253	ENSUAMG00000022796	PRDM4	100	97.253	Ursus_americanus
ENSTTRG00000011056	PRDM4	100	97.253	ENSUMAG00000017231	PRDM4	100	97.253	Ursus_maritimus
ENSTTRG00000011056	PRDM4	99	97.867	ENSVPAG00000002215	PRDM4	100	97.867	Vicugna_pacos
ENSTTRG00000011056	PRDM4	100	97.129	ENSVVUG00000023397	PRDM4	100	97.129	Vulpes_vulpes