EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000011117 (Gene tree)
Gene ID: -
Gene Symbol: PRPF18
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 47938 bases
Position: chrGeneScaffold_1118:411610-459547
Accession: 101332951
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000010541	PRP4	PF08799.11	5.7e-14	1	1
ENSTTRP00000010541	Prp18	PF02840.15	2.8e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000011116	-	1029	-	ENSTTRP00000010541	342 (aa)	XP_019789018	A0A2U4B719

Gene Model

Click here to download ENSTTRG00000011117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000011117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000011117	PRPF18	100	99.708	ENSG00000165630	PRPF18	100	99.708	Homo_sapiens
ENSTTRG00000011117	PRPF18	100	85.965	ENSAPOG00000024177	prpf18	100	85.965	Acanthochromis_polyacanthus
ENSTTRG00000011117	PRPF18	100	99.123	ENSAMEG00000013591	-	100	99.123	Ailuropoda_melanoleuca
ENSTTRG00000011117	PRPF18	100	84.795	ENSACIG00000001186	prpf18	100	84.795	Amphilophus_citrinellus
ENSTTRG00000011117	PRPF18	98	85.970	ENSAOCG00000006572	prpf18	94	83.041	Amphiprion_ocellaris
ENSTTRG00000011117	PRPF18	100	86.257	ENSAPEG00000004564	prpf18	100	86.257	Amphiprion_percula
ENSTTRG00000011117	PRPF18	100	84.795	ENSATEG00000000303	prpf18	100	84.795	Anabas_testudineus
ENSTTRG00000011117	PRPF18	99	91.765	ENSAPLG00000003387	-	99	91.765	Anas_platyrhynchos
ENSTTRG00000011117	PRPF18	100	92.151	ENSACAG00000000818	-	100	92.151	Anolis_carolinensis
ENSTTRG00000011117	PRPF18	100	99.123	ENSANAG00000037445	-	100	99.123	Aotus_nancymaae
ENSTTRG00000011117	PRPF18	100	85.380	ENSACLG00000026296	prpf18	100	85.380	Astatotilapia_calliptera
ENSTTRG00000011117	PRPF18	100	84.286	ENSAMXG00000012848	prpf18	100	84.286	Astyanax_mexicanus
ENSTTRG00000011117	PRPF18	100	98.830	ENSBTAG00000017244	PRPF18	100	98.830	Bos_taurus
ENSTTRG00000011117	PRPF18	98	38.506	WBGene00009320	F32B6.3	97	38.506	Caenorhabditis_elegans
ENSTTRG00000011117	PRPF18	100	99.123	ENSCJAG00000009432	-	100	99.123	Callithrix_jacchus
ENSTTRG00000011117	PRPF18	100	99.123	ENSCAFG00000004735	-	100	99.123	Canis_familiaris
ENSTTRG00000011117	PRPF18	100	99.123	ENSCAFG00020007712	-	100	99.123	Canis_lupus_dingo
ENSTTRG00000011117	PRPF18	100	98.830	ENSCHIG00000000499	-	100	98.830	Capra_hircus
ENSTTRG00000011117	PRPF18	100	98.830	ENSTSYG00000003517	-	100	98.830	Carlito_syrichta
ENSTTRG00000011117	PRPF18	100	99.708	ENSCPOG00000021069	-	100	99.708	Cavia_porcellus
ENSTTRG00000011117	PRPF18	100	99.123	ENSCCAG00000036822	-	100	99.123	Cebus_capucinus
ENSTTRG00000011117	PRPF18	100	88.596	ENSCATG00000016633	-	100	88.596	Cercocebus_atys
ENSTTRG00000011117	PRPF18	100	98.830	ENSCLAG00000011770	-	100	98.830	Chinchilla_lanigera
ENSTTRG00000011117	PRPF18	100	97.151	ENSCSAG00000013109	-	100	97.151	Chlorocebus_sabaeus
ENSTTRG00000011117	PRPF18	100	89.607	ENSCPBG00000003100	-	100	90.169	Chrysemys_picta_bellii
ENSTTRG00000011117	PRPF18	99	54.706	ENSCING00000020481	-	97	54.706	Ciona_intestinalis
ENSTTRG00000011117	PRPF18	99	54.942	ENSCSAVG00000010546	-	99	54.651	Ciona_savignyi
ENSTTRG00000011117	PRPF18	100	99.415	ENSCANG00000034900	-	100	99.415	Colobus_angolensis_palliatus
ENSTTRG00000011117	PRPF18	100	99.123	ENSCGRG00001023665	Prpf18	100	99.123	Cricetulus_griseus_chok1gshd
ENSTTRG00000011117	PRPF18	100	99.123	ENSCGRG00000014690	Prpf18	100	99.123	Cricetulus_griseus_crigri
ENSTTRG00000011117	PRPF18	100	83.041	ENSCSEG00000005536	prpf18	99	83.041	Cynoglossus_semilaevis
ENSTTRG00000011117	PRPF18	100	84.795	ENSCVAG00000012401	prpf18	100	84.795	Cyprinodon_variegatus
ENSTTRG00000011117	PRPF18	100	85.088	ENSDARG00000058306	prpf18	100	85.088	Danio_rerio
ENSTTRG00000011117	PRPF18	100	98.538	ENSDNOG00000035607	-	100	98.538	Dasypus_novemcinctus
ENSTTRG00000011117	PRPF18	100	98.830	ENSDORG00000000858	Prpf18	100	98.830	Dipodomys_ordii
ENSTTRG00000011117	PRPF18	99	51.032	FBgn0027784	Prp18	98	51.032	Drosophila_melanogaster
ENSTTRG00000011117	PRPF18	100	87.719	ENSETEG00000015060	-	100	87.719	Echinops_telfairi
ENSTTRG00000011117	PRPF18	100	66.859	ENSEBUG00000016502	prpf18	99	65.896	Eptatretus_burgeri
ENSTTRG00000011117	PRPF18	100	99.415	ENSEASG00005019373	-	100	99.415	Equus_asinus_asinus
ENSTTRG00000011117	PRPF18	100	99.415	ENSECAG00000006997	PRPF18	100	99.415	Equus_caballus
ENSTTRG00000011117	PRPF18	92	62.658	ENSEEUG00000001171	-	100	62.658	Erinaceus_europaeus
ENSTTRG00000011117	PRPF18	100	82.507	ENSELUG00000022190	prpf18	100	82.507	Esox_lucius
ENSTTRG00000011117	PRPF18	100	98.830	ENSFCAG00000004436	-	100	98.830	Felis_catus
ENSTTRG00000011117	PRPF18	92	88.685	ENSFALG00000001912	-	97	89.538	Ficedula_albicollis
ENSTTRG00000011117	PRPF18	99	64.348	ENSFDAG00000010713	-	97	64.348	Fukomys_damarensis
ENSTTRG00000011117	PRPF18	94	99.062	ENSFDAG00000014026	-	100	99.062	Fukomys_damarensis
ENSTTRG00000011117	PRPF18	80	89.377	ENSFHEG00000020125	prpf18	98	89.513	Fundulus_heteroclitus
ENSTTRG00000011117	PRPF18	99	80.352	ENSGMOG00000012210	prpf18	99	80.352	Gadus_morhua
ENSTTRG00000011117	PRPF18	100	92.690	ENSGALG00000043593	-	100	92.690	Gallus_gallus
ENSTTRG00000011117	PRPF18	100	83.333	ENSGAFG00000006034	prpf18	100	83.333	Gambusia_affinis
ENSTTRG00000011117	PRPF18	100	82.164	ENSGACG00000012232	prpf18	100	82.164	Gasterosteus_aculeatus
ENSTTRG00000011117	PRPF18	100	92.982	ENSGAGG00000016878	-	100	92.982	Gopherus_agassizii
ENSTTRG00000011117	PRPF18	92	99.684	ENSGGOG00000025188	-	96	99.684	Gorilla_gorilla
ENSTTRG00000011117	PRPF18	100	85.380	ENSHBUG00000010264	prpf18	100	85.380	Haplochromis_burtoni
ENSTTRG00000011117	PRPF18	100	99.123	ENSHGLG00000018534	PRPF18	100	99.123	Heterocephalus_glaber_female
ENSTTRG00000011117	PRPF18	94	99.375	ENSHGLG00100012161	-	98	99.375	Heterocephalus_glaber_male
ENSTTRG00000011117	PRPF18	100	84.795	ENSHCOG00000015987	prpf18	100	84.795	Hippocampus_comes
ENSTTRG00000011117	PRPF18	100	81.586	ENSIPUG00000007432	prpf18	100	82.720	Ictalurus_punctatus
ENSTTRG00000011117	PRPF18	100	97.953	ENSSTOG00000008735	-	100	97.953	Ictidomys_tridecemlineatus
ENSTTRG00000011117	PRPF18	100	72.622	ENSJJAG00000015191	-	100	72.622	Jaculus_jaculus
ENSTTRG00000011117	PRPF18	100	99.708	ENSJJAG00000024041	-	100	99.708	Jaculus_jaculus
ENSTTRG00000011117	PRPF18	100	83.626	ENSKMAG00000012124	prpf18	100	83.626	Kryptolebias_marmoratus
ENSTTRG00000011117	PRPF18	99	84.024	ENSLBEG00000028466	prpf18	99	84.024	Labrus_bergylta
ENSTTRG00000011117	PRPF18	100	87.135	ENSLACG00000009885	prpf18	100	87.135	Latimeria_chalumnae
ENSTTRG00000011117	PRPF18	100	90.643	ENSLOCG00000016736	prpf18	100	90.643	Lepisosteus_oculatus
ENSTTRG00000011117	PRPF18	100	99.708	ENSLAFG00000007753	-	100	99.708	Loxodonta_africana
ENSTTRG00000011117	PRPF18	100	99.708	ENSMFAG00000000540	-	100	99.708	Macaca_fascicularis
ENSTTRG00000011117	PRPF18	100	99.708	ENSMMUG00000015071	PRPF18	100	99.708	Macaca_mulatta
ENSTTRG00000011117	PRPF18	100	99.708	ENSMNEG00000024679	-	100	99.708	Macaca_nemestrina
ENSTTRG00000011117	PRPF18	100	84.503	ENSMLEG00000031715	-	100	84.503	Mandrillus_leucophaeus
ENSTTRG00000011117	PRPF18	100	83.918	ENSMAMG00000006610	prpf18	100	83.918	Mastacembelus_armatus
ENSTTRG00000011117	PRPF18	100	85.380	ENSMZEG00005019392	prpf18	100	85.380	Maylandia_zebra
ENSTTRG00000011117	PRPF18	100	92.690	ENSMGAG00000005023	-	100	92.690	Meleagris_gallopavo
ENSTTRG00000011117	PRPF18	100	99.415	ENSMICG00000006572	-	100	99.415	Microcebus_murinus
ENSTTRG00000011117	PRPF18	100	99.708	ENSMOCG00000021468	Prpf18	100	99.708	Microtus_ochrogaster
ENSTTRG00000011117	PRPF18	100	84.211	ENSMMOG00000013012	prpf18	100	84.211	Mola_mola
ENSTTRG00000011117	PRPF18	100	85.380	ENSMODG00000024043	-	100	85.380	Monodelphis_domestica
ENSTTRG00000011117	PRPF18	96	90.828	ENSMODG00000016902	-	92	90.828	Monodelphis_domestica
ENSTTRG00000011117	PRPF18	100	78.571	ENSMALG00000005486	prpf18	100	78.857	Monopterus_albus
ENSTTRG00000011117	PRPF18	100	99.123	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSTTRG00000011117	PRPF18	100	98.830	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSTTRG00000011117	PRPF18	100	99.415	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSTTRG00000011117	PRPF18	100	98.538	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSTTRG00000011117	PRPF18	100	98.830	ENSMPUG00000000938	-	100	98.830	Mustela_putorius_furo
ENSTTRG00000011117	PRPF18	100	98.830	ENSMLUG00000009200	-	100	98.830	Myotis_lucifugus
ENSTTRG00000011117	PRPF18	100	99.123	ENSNGAG00000012500	-	100	99.123	Nannospalax_galili
ENSTTRG00000011117	PRPF18	67	92.174	ENSNGAG00000023550	-	82	92.174	Nannospalax_galili
ENSTTRG00000011117	PRPF18	100	85.380	ENSNBRG00000001778	prpf18	100	85.380	Neolamprologus_brichardi
ENSTTRG00000011117	PRPF18	100	99.708	ENSNLEG00000012186	-	100	99.708	Nomascus_leucogenys
ENSTTRG00000011117	PRPF18	100	65.497	ENSMEUG00000005032	-	100	65.497	Notamacropus_eugenii
ENSTTRG00000011117	PRPF18	77	81.132	ENSOPRG00000002153	-	100	81.132	Ochotona_princeps
ENSTTRG00000011117	PRPF18	100	98.830	ENSODEG00000003770	-	100	98.830	Octodon_degus
ENSTTRG00000011117	PRPF18	98	84.776	ENSONIG00000014854	prpf18	96	84.776	Oreochromis_niloticus
ENSTTRG00000011117	PRPF18	100	94.444	ENSOANG00000015404	-	100	94.444	Ornithorhynchus_anatinus
ENSTTRG00000011117	PRPF18	100	99.415	ENSOCUG00000027756	-	100	95.322	Oryctolagus_cuniculus
ENSTTRG00000011117	PRPF18	100	82.286	ENSORLG00000010293	prpf18	100	82.286	Oryzias_latipes
ENSTTRG00000011117	PRPF18	100	84.795	ENSORLG00020001530	prpf18	100	84.795	Oryzias_latipes_hni
ENSTTRG00000011117	PRPF18	100	84.503	ENSORLG00015013705	prpf18	100	84.503	Oryzias_latipes_hsok
ENSTTRG00000011117	PRPF18	100	85.965	ENSOMEG00000009167	prpf18	100	85.965	Oryzias_melastigma
ENSTTRG00000011117	PRPF18	100	98.538	ENSOGAG00000007294	-	100	98.538	Otolemur_garnettii
ENSTTRG00000011117	PRPF18	100	96.296	ENSOARG00000006243	-	100	96.296	Ovis_aries
ENSTTRG00000011117	PRPF18	100	99.708	ENSPPAG00000041959	-	100	99.708	Pan_paniscus
ENSTTRG00000011117	PRPF18	100	98.830	ENSPPRG00000000107	-	100	98.830	Panthera_pardus
ENSTTRG00000011117	PRPF18	100	98.538	ENSPTIG00000021094	-	100	98.538	Panthera_tigris_altaica
ENSTTRG00000011117	PRPF18	100	99.708	ENSPTRG00000002306	PRPF18	100	99.708	Pan_troglodytes
ENSTTRG00000011117	PRPF18	100	99.415	ENSPANG00000023346	-	100	99.415	Papio_anubis
ENSTTRG00000011117	PRPF18	86	98.113	ENSPKIG00000014128	prpf18	96	82.336	Paramormyrops_kingsleyae
ENSTTRG00000011117	PRPF18	100	93.275	ENSPSIG00000016064	-	100	93.275	Pelodiscus_sinensis
ENSTTRG00000011117	PRPF18	100	78.947	ENSPMGG00000016486	prpf18	100	78.947	Periophthalmus_magnuspinnatus
ENSTTRG00000011117	PRPF18	100	99.415	ENSPEMG00000013704	Prpf18	100	99.415	Peromyscus_maniculatus_bairdii
ENSTTRG00000011117	PRPF18	100	74.566	ENSPMAG00000000204	prpf18	100	74.566	Petromyzon_marinus
ENSTTRG00000011117	PRPF18	92	96.519	ENSPCIG00000012963	-	99	96.519	Phascolarctos_cinereus
ENSTTRG00000011117	PRPF18	100	82.000	ENSPFOG00000017611	prpf18	100	82.000	Poecilia_formosa
ENSTTRG00000011117	PRPF18	100	83.918	ENSPLAG00000000369	prpf18	100	83.918	Poecilia_latipinna
ENSTTRG00000011117	PRPF18	100	83.918	ENSPMEG00000005183	prpf18	100	83.918	Poecilia_mexicana
ENSTTRG00000011117	PRPF18	100	83.333	ENSPREG00000015232	prpf18	100	83.333	Poecilia_reticulata
ENSTTRG00000011117	PRPF18	100	99.415	ENSPPYG00000002101	PRPF18	100	99.415	Pongo_abelii
ENSTTRG00000011117	PRPF18	100	80.702	ENSPCAG00000010833	-	100	80.702	Procavia_capensis
ENSTTRG00000011117	PRPF18	100	92.105	ENSPCOG00000013057	-	100	92.105	Propithecus_coquereli
ENSTTRG00000011117	PRPF18	100	61.111	ENSPVAG00000002947	-	100	61.111	Pteropus_vampyrus
ENSTTRG00000011117	PRPF18	100	85.380	ENSPNYG00000003554	prpf18	100	85.380	Pundamilia_nyererei
ENSTTRG00000011117	PRPF18	100	85.470	ENSPNAG00000023151	prpf18	100	85.470	Pygocentrus_nattereri
ENSTTRG00000011117	PRPF18	100	98.538	ENSRNOG00000018396	Prpf18	100	98.538	Rattus_norvegicus
ENSTTRG00000011117	PRPF18	100	99.123	ENSRBIG00000028028	-	100	99.123	Rhinopithecus_bieti
ENSTTRG00000011117	PRPF18	100	99.415	ENSRROG00000040695	-	100	99.415	Rhinopithecus_roxellana
ENSTTRG00000011117	PRPF18	100	99.123	ENSSBOG00000034482	-	100	99.123	Saimiri_boliviensis_boliviensis
ENSTTRG00000011117	PRPF18	100	77.778	ENSSHAG00000009669	-	100	77.778	Sarcophilus_harrisii
ENSTTRG00000011117	PRPF18	100	96.491	ENSSHAG00000016463	-	100	96.491	Sarcophilus_harrisii
ENSTTRG00000011117	PRPF18	98	81.449	ENSSFOG00015022118	prpf18	100	76.945	Scleropages_formosus
ENSTTRG00000011117	PRPF18	77	44.906	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSTTRG00000011117	PRPF18	100	83.626	ENSSMAG00000005308	prpf18	100	83.626	Scophthalmus_maximus
ENSTTRG00000011117	PRPF18	100	85.673	ENSSDUG00000015428	prpf18	100	85.673	Seriola_dumerili
ENSTTRG00000011117	PRPF18	100	85.673	ENSSLDG00000023989	prpf18	100	85.673	Seriola_lalandi_dorsalis
ENSTTRG00000011117	PRPF18	100	68.713	ENSSARG00000005307	-	100	68.713	Sorex_araneus
ENSTTRG00000011117	PRPF18	100	92.982	ENSSPUG00000002619	-	100	92.982	Sphenodon_punctatus
ENSTTRG00000011117	PRPF18	100	85.088	ENSSPAG00000019502	prpf18	100	85.088	Stegastes_partitus
ENSTTRG00000011117	PRPF18	100	99.123	ENSSSCG00000026354	-	100	99.123	Sus_scrofa
ENSTTRG00000011117	PRPF18	100	92.690	ENSTGUG00000002286	-	100	92.690	Taeniopygia_guttata
ENSTTRG00000011117	PRPF18	100	82.749	ENSTRUG00000011278	prpf18	100	82.749	Takifugu_rubripes
ENSTTRG00000011117	PRPF18	100	82.456	ENSTNIG00000000911	prpf18	100	82.456	Tetraodon_nigroviridis
ENSTTRG00000011117	PRPF18	79	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSTTRG00000011117	PRPF18	95	96.000	ENSUAMG00000001815	-	94	96.000	Ursus_americanus
ENSTTRG00000011117	PRPF18	100	94.152	ENSUMAG00000012329	-	100	94.152	Ursus_maritimus
ENSTTRG00000011117	PRPF18	100	93.567	ENSVPAG00000011486	-	100	93.567	Vicugna_pacos
ENSTTRG00000011117	PRPF18	100	99.123	ENSVVUG00000005453	-	100	99.123	Vulpes_vulpes
ENSTTRG00000011117	PRPF18	100	80.580	ENSXETG00000024057	prpf18	100	80.580	Xenopus_tropicalis
ENSTTRG00000011117	PRPF18	100	82.849	ENSXCOG00000020414	prpf18	100	82.849	Xiphophorus_couchianus
ENSTTRG00000011117	PRPF18	100	83.626	ENSXMAG00000004713	prpf18	91	83.626	Xiphophorus_maculatus